This page contains information for Module087, including a list of the genes within the module, the Gene Ontology enrichement analysis results, and a heatmap showing these genes' tissue specific expression patterns. Also included is a subnetwork for the genes within the module. For this subnetwork, a SIF file (check here for details of SIF file format) is provided for downloding, which can be opened and viewed within the Cytoscape software. Alternatively, the subnetwork can be also can be opened and visualized by clicking the link provided below.
Maize Gene | Symbol | Moule No. | Arabidopsis Homologue | Arabidopsis Homologue Symbol | Arabidopsis Homologue Name | Arabidopsis Homologue Description | Arabidopsis Homologue TF_Family |
---|---|---|---|---|---|---|---|
AC214267.3_FG004 | Module087 | ||||||
GRMZM2G006884 | Module087 | ||||||
GRMZM2G018649 | Module087 | AT2G37170 | PIP2B | plasma membrane intrinsic protein 2 | plasma membrane intrinsic protein 2 | ||
GRMZM2G010768 | Module087 | AT2G22240 | MIPS2 | myo-inositol-1-phosphate synthase 2 | myo-inositol-1-phosphate synthase 2 | ||
GRMZM2G042133 | Module087 | AT3G44110 | J3 | DNAJ homologue 3 | |||
GRMZM2G042782 | Module087 | AT1G43690 | AT1G43690 | ubiquitin interaction motif-containing protein | |||
GRMZM2G050625 | Module087 | AT1G78600 | LZF1 | light-regulated zinc finger protein 1 | light-regulated zinc finger protein 1 | Orphans | |
GRMZM2G050867 | Module087 | AT1G80680 | SAR3 | SUPPRESSOR OF AUXIN RESISTANCE 3 | SUPPRESSOR OF AUXIN RESISTANCE 3 | ||
GRMZM2G056022 | Module087 | ||||||
GRMZM2G052279 | Module087 | AT3G19340 | AT3G19340 | Protein of unknown function (DUF3754) | |||
GRMZM2G056377 | Module087 | AT1G71430 | AT1G71430 | ||||
GRMZM2G056488 | Module087 | AT1G15660 | CENP-C | centromere protein C | centromere protein C | ||
GRMZM2G065344 | Module087 | ||||||
GRMZM2G069085 | Module087 | AT4G27745 | AT4G27745 | Yippee family putative zinc-binding protein | |||
GRMZM2G083156 | Module087 | AT2G25680 | MOT1 | molybdate transporter 1 | molybdate transporter 1 | ||
GRMZM2G093346 | Module087 | AT1G07890 | APX1 | ascorbate peroxidase 1 | ascorbate peroxidase 1 | ||
GRMZM2G108410 | Module087 | ||||||
GRMZM2G110742 | sbp4 (GRASSIUS) | Module087 | AT2G47470 | UNE5 | UNFERTILIZED EMBRYO SAC 5 | thioredoxin family protein | |
GRMZM2G134496 | Module087 | AT5G10190 | AT5G10190 | Major facilitator superfamily protein | |||
GRMZM2G150356 | Module087 | AT1G07890 | APX1 | ascorbate peroxidase 1 | ascorbate peroxidase 1 | ||
GRMZM2G160816 | Module087 | ||||||
GRMZM2G162119 | c3h44 | Module087 | AT1G27650 | ATU2AF35A | U2 snRNP auxiliary factor small subunit, putative | C3H | |
GRMZM2G170472 | Module087 | ||||||
GRMZM2G312075 | Module087 | AT5G20130 | AT5G20130 | ||||
GRMZM2G321023 | Module087 | AT3G11490 | AT3G11490 | rac GTPase activating protein | |||
GRMZM2G339009 | Module087 | AT3G55990 | ESK1 | ESKIMO 1 | Plant protein of unknown function (DUF828) | ||
GRMZM2G347270 | Module087 | AT1G07705 | AT1G07705 | NOT2 / NOT3 / NOT5 family | |||
GRMZM2G355342 | Module087 | AT1G03360 | RRP4 | ribosomal RNA processing 4 | ribosomal RNA processing 4 | ||
GRMZM2G375956 | Module087 | AT5G13470 | AT5G13470 | ||||
GRMZM2G392513 | Module087 | AT4G39800 | MIPS1 | D-myo-Inositol 3-Phosphate Synthase 1 | myo-inositol-1-phosphate synthase 1 | ||
GRMZM2G408834 | Module087 | ||||||
GRMZM2G419024 | Module087 | AT1G15060 | AT1G15060 | Uncharacterised conserved protein UCP031088, alpha/beta hydrolase | |||
GRMZM2G443091 | Module087 | AT2G33220 | AT2G33220 | GRIM-19 protein | |||
GRMZM2G458718 | Module087 | AT2G24420 | AT2G24420 | DNA repair ATPase-related | |||
GRMZM5G812246 | Module087 | ||||||
GRMZM5G831951 | umc1538a | Module087 | AT2G17380 | AP19 | associated protein 19 | associated protein 19 | |
GRMZM2G128771 | Module087 | AT2G44610 | RAB6A | Ras-related small GTP-binding family protein | |||
GRMZM5G861959 | Module087 | AT1G80680 | SAR3 | SUPPRESSOR OF AUXIN RESISTANCE 3 | SUPPRESSOR OF AUXIN RESISTANCE 3 | ||
GRMZM5G868120 | Module087 | AT5G04980 | AT5G04980 | DNAse I-like superfamily protein |
Module No. | Number of genes within the module | GO_Rank | GO ID | GO catogery | GO term | pValue | Number of genes with the GO within the module | Number of genes with the GO within the genome (background set) |
---|---|---|---|---|---|---|---|---|
Module087 | 39 | 1 | GO:0004512 | molecular_function | inositol-3-phosphate synthase activity | 1.01E-05 | 2 | 5 |
Module087 | 39 | 2 | GO:0006021 | biological_process | inositol biosynthetic process | 1.73E-05 | 2 | 6 |
Module087 | 39 | 3 | GO:0006020 | biological_process | inositol metabolic process | 3.23E-05 | 2 | 8 |
Module087 | 39 | 4 | GO:0016872 | molecular_function | intramolecular lyase activity | 0.000136227 | 2 | 17 |
Module087 | 39 | 5 | GO:0016853 | molecular_function | isomerase activity | 0.000165935 | 4 | 280 |
Module087 | 39 | 6 | GO:0046173 | biological_process | polyol biosynthetic process | 0.000195603 | 2 | 19 |
Module087 | 39 | 7 | GO:0006644 | biological_process | phospholipid metabolic process | 0.000648747 | 3 | 158 |
Module087 | 39 | 8 | GO:0015103 | molecular_function | inorganic anion transmembrane transporter activity | 0.000974876 | 2 | 45 |
Module087 | 39 | 9 | GO:0019751 | biological_process | polyol metabolic process | 0.001266461 | 2 | 48 |
Module087 | 39 | 10 | GO:0046165 | biological_process | alcohol biosynthetic process | 0.001907493 | 2 | 59 |
Module087 | 39 | 11 | GO:0015698 | biological_process | inorganic anion transport | 0.001972002 | 2 | 60 |
Module087 | 39 | 12 | GO:0008654 | biological_process | phospholipid biosynthetic process | 0.002825837 | 2 | 72 |
Module087 | 39 | 13 | GO:1901617 | biological_process | organic hydroxy compound biosynthetic process | 0.004666283 | 2 | 93 |
Module087 | 39 | 14 | GO:0008509 | molecular_function | anion transmembrane transporter activity | 0.007495436 | 2 | 127 |
Module087 | 39 | 15 | GO:0006066 | biological_process | alcohol metabolic process | 0.008154336 | 2 | 124 |
Module087 | 39 | 16 | GO:0006810 | biological_process | transport | 0.013083233 | 6 | 1919 |
Module087 | 39 | 17 | GO:0005254 | molecular_function | chloride channel activity | 0.01339374 | 1 | 13 |
Module087 | 39 | 18 | GO:0004807 | molecular_function | triose-phosphate isomerase activity | 0.01339374 | 1 | 13 |
Module087 | 39 | 19 | GO:0005247 | molecular_function | voltage-gated chloride channel activity | 0.01339374 | 1 | 13 |
Module087 | 39 | 20 | GO:0051234 | biological_process | establishment of localization | 0.013446237 | 6 | 1930 |
Module087 | 39 | 21 | GO:0004601 | molecular_function | peroxidase activity | 0.014155629 | 2 | 177 |
Module087 | 39 | 22 | GO:0015108 | molecular_function | chloride transmembrane transporter activity | 0.014417003 | 1 | 14 |
Module087 | 39 | 23 | GO:1901615 | biological_process | organic hydroxy compound metabolic process | 0.014582752 | 2 | 168 |
Module087 | 39 | 24 | GO:0016684 | molecular_function | oxidoreductase activity, acting on peroxide as acceptor | 0.014614324 | 2 | 180 |
Module087 | 39 | 25 | GO:0005215 | molecular_function | transporter activity | 0.014982063 | 4 | 959 |
Module087 | 39 | 26 | GO:0051179 | biological_process | localization | 0.015080696 | 6 | 1977 |
Module087 | 39 | 27 | GO:0034637 | biological_process | cellular carbohydrate biosynthetic process | 0.015756288 | 2 | 175 |
Module087 | 39 | 28 | GO:0006821 | biological_process | chloride transport | 0.016575427 | 1 | 15 |
Module087 | 39 | 29 | GO:0006820 | biological_process | anion transport | 0.017680409 | 2 | 186 |
Module087 | 39 | 30 | GO:0016209 | molecular_function | antioxidant activity | 0.019200701 | 2 | 208 |
Module087 | 39 | 31 | GO:0044255 | biological_process | cellular lipid metabolic process | 0.020216312 | 3 | 539 |
Module087 | 39 | 32 | GO:0019637 | biological_process | organophosphate metabolic process | 0.020315591 | 3 | 540 |
Module087 | 39 | 33 | GO:0008308 | molecular_function | voltage-gated anion channel activity | 0.022567224 | 1 | 22 |
Module087 | 39 | 34 | GO:0006457 | biological_process | protein folding | 0.023004834 | 2 | 214 |
Module087 | 39 | 35 | GO:0005253 | molecular_function | anion channel activity | 0.02358153 | 1 | 23 |
Module087 | 39 | 36 | GO:0016051 | biological_process | carbohydrate biosynthetic process | 0.025467341 | 2 | 226 |
Module087 | 39 | 37 | GO:0090407 | biological_process | organophosphate biosynthetic process | 0.029133624 | 2 | 243 |
Module087 | 39 | 38 | GO:0046856 | biological_process | phosphatidylinositol dephosphorylation | 0.029650758 | 1 | 27 |
Module087 | 39 | 39 | GO:0046839 | biological_process | phospholipid dephosphorylation | 0.029650758 | 1 | 27 |
Module087 | 39 | 40 | GO:0022892 | molecular_function | substrate-specific transporter activity | 0.03341354 | 3 | 698 |
Module087 | 39 | 41 | GO:0005244 | molecular_function | voltage-gated ion channel activity | 0.033670248 | 1 | 33 |
Module087 | 39 | 42 | GO:0022832 | molecular_function | voltage-gated channel activity | 0.033670248 | 1 | 33 |
Module087 | 39 | 43 | GO:0016861 | molecular_function | intramolecular oxidoreductase activity, interconverting aldoses and ketoses | 0.034673705 | 1 | 34 |
Module087 | 39 | 44 | GO:0031072 | molecular_function | heat shock protein binding | 0.042666134 | 1 | 42 |
Module087 | 39 | 45 | GO:0022836 | molecular_function | gated channel activity | 0.045647206 | 1 | 45 |
Module087 | 39 | 46 | GO:0016860 | molecular_function | intramolecular oxidoreductase activity | 0.047629731 | 1 | 47 |
Module087 | 39 | 47 | GO:0044262 | biological_process | cellular carbohydrate metabolic process | 0.047876427 | 2 | 319 |
Gene A | Gene B | Partial correlation coefficient |
---|---|---|
AC214267.3_FG004 | GRMZM2G056022 | 0.0372 |
AC214267.3_FG004 | GRMZM2G108410 | 0.0355 |
AC214267.3_FG004 | GRMZM2G347270 | 0.0433 |
AC214267.3_FG004 | GRMZM2G419024 | 0.0391 |
GRMZM2G006884 | GRMZM2G056488 | 0.3112 |
GRMZM2G006884 | GRMZM2G083156 | 0.115 |
GRMZM2G006884 | GRMZM2G134496 | 0.2457 |
GRMZM2G018649 | sbp4 (GRASSIUS) | 0.0537 |
GRMZM2G018649 | GRMZM2G134496 | 0.0536 |
GRMZM2G018649 | GRMZM2G150356 | 0.0368 |
GRMZM2G018649 | GRMZM2G443091 | 0.0507 |
GRMZM2G018649 | GRMZM5G812246 | 0.0384 |
GRMZM2G010768 | GRMZM2G056022 | 0.0425 |
GRMZM2G010768 | GRMZM2G056488 | 0.0608 |
GRMZM2G010768 | GRMZM2G065344 | 0.0482 |
GRMZM2G010768 | sbp4 (GRASSIUS) | 0.0351 |
GRMZM2G010768 | GRMZM2G347270 | 0.0486 |
GRMZM2G010768 | GRMZM2G392513 | 0.1071 |
GRMZM2G010768 | GRMZM5G868120 | 0.0363 |
GRMZM2G042133 | sbp4 (GRASSIUS) | 0.0455 |
GRMZM2G042133 | GRMZM5G812246 | 0.098 |
GRMZM2G042782 | GRMZM2G056377 | 0.0377 |
GRMZM2G042782 | c3h44 | 0.0397 |
GRMZM2G050625 | GRMZM2G056022 | 0.061 |
GRMZM2G050625 | GRMZM2G160816 | 0.0457 |
GRMZM2G050867 | GRMZM5G861959 | 0.0591 |
GRMZM2G056022 | GRMZM2G052279 | 0.0677 |
GRMZM2G056022 | GRMZM2G056488 | 0.107 |
GRMZM2G056022 | GRMZM2G065344 | 0.0439 |
GRMZM2G056022 | GRMZM2G069085 | -0.0633 |
GRMZM2G056022 | GRMZM2G108410 | 0.0502 |
GRMZM2G056022 | sbp4 (GRASSIUS) | 0.1017 |
GRMZM2G056022 | GRMZM2G160816 | 0.1397 |
GRMZM2G056022 | GRMZM2G312075 | 0.0398 |
GRMZM2G056022 | GRMZM2G347270 | 0.0495 |
GRMZM2G056022 | GRMZM2G355342 | 0.0408 |
GRMZM2G056022 | GRMZM2G392513 | 0.0444 |
GRMZM2G056022 | GRMZM2G408834 | 0.0536 |
GRMZM2G052279 | GRMZM2G056488 | 0.0607 |
GRMZM2G052279 | GRMZM2G065344 | 0.0434 |
GRMZM2G052279 | GRMZM2G108410 | 0.0537 |
GRMZM2G052279 | sbp4 (GRASSIUS) | 0.058 |
GRMZM2G052279 | GRMZM2G160816 | 0.0409 |
GRMZM2G052279 | GRMZM2G347270 | 0.0584 |
GRMZM2G052279 | GRMZM2G408834 | 0.0418 |
GRMZM2G056377 | GRMZM2G056488 | 0.0623 |
GRMZM2G056377 | GRMZM2G065344 | 0.037 |
GRMZM2G056377 | sbp4 (GRASSIUS) | 0.0386 |
GRMZM2G056377 | GRMZM2G150356 | 0.0374 |
GRMZM2G056377 | c3h44 | 0.037 |
GRMZM2G056377 | GRMZM2G347270 | 0.0451 |
GRMZM2G056377 | GRMZM2G408834 | 0.0439 |
GRMZM2G056377 | GRMZM2G458718 | 0.0401 |
GRMZM2G056488 | GRMZM2G065344 | 0.0831 |
GRMZM2G056488 | GRMZM2G093346 | 0.0394 |
GRMZM2G056488 | GRMZM2G108410 | 0.0527 |
GRMZM2G056488 | sbp4 (GRASSIUS) | 0.0648 |
GRMZM2G056488 | GRMZM2G150356 | 0.077 |
GRMZM2G056488 | GRMZM2G339009 | 0.065 |
GRMZM2G056488 | GRMZM2G347270 | 0.0771 |
GRMZM2G056488 | GRMZM2G408834 | 0.0812 |
GRMZM2G056488 | GRMZM5G812246 | 0.0648 |
GRMZM2G056488 | GRMZM5G861959 | 0.0937 |
GRMZM2G065344 | GRMZM2G108410 | 0.0672 |
GRMZM2G065344 | sbp4 (GRASSIUS) | 0.0377 |
GRMZM2G065344 | GRMZM2G170472 | 0.0457 |
GRMZM2G065344 | GRMZM2G347270 | 0.1154 |
GRMZM2G065344 | GRMZM2G355342 | 0.0412 |
GRMZM2G065344 | GRMZM2G408834 | 0.0355 |
GRMZM2G065344 | GRMZM5G812246 | 0.0376 |
GRMZM2G065344 | GRMZM5G861959 | 0.0358 |
GRMZM2G065344 | GRMZM5G868120 | 0.1273 |
GRMZM2G083156 | GRMZM2G134496 | 0.0847 |
GRMZM2G093346 | sbp4 (GRASSIUS) | 0.0505 |
GRMZM2G093346 | GRMZM2G150356 | 0.0927 |
GRMZM2G093346 | GRMZM2G443091 | 0.0365 |
GRMZM2G108410 | sbp4 (GRASSIUS) | 0.0437 |
GRMZM2G108410 | GRMZM2G160816 | 0.0407 |
GRMZM2G108410 | GRMZM2G321023 | 0.0455 |
GRMZM2G108410 | GRMZM2G347270 | 0.083 |
GRMZM2G108410 | GRMZM2G355342 | 0.0513 |
GRMZM2G108410 | GRMZM2G408834 | 0.0622 |
GRMZM2G108410 | GRMZM5G868120 | 0.0517 |
sbp4 (GRASSIUS) | GRMZM2G150356 | 0.0484 |
sbp4 (GRASSIUS) | GRMZM2G160816 | 0.0803 |
sbp4 (GRASSIUS) | GRMZM2G347270 | 0.0641 |
sbp4 (GRASSIUS) | GRMZM2G355342 | 0.043 |
sbp4 (GRASSIUS) | GRMZM2G375956 | 0.0355 |
sbp4 (GRASSIUS) | GRMZM2G408834 | 0.0526 |
sbp4 (GRASSIUS) | GRMZM5G812246 | 0.0379 |
GRMZM2G134496 | umc1538a | 0.0603 |
GRMZM2G150356 | GRMZM2G347270 | 0.0379 |
GRMZM2G150356 | GRMZM2G443091 | 0.0382 |
GRMZM2G150356 | GRMZM5G861959 | 0.0448 |
GRMZM2G160816 | GRMZM2G355342 | 0.0433 |
GRMZM2G160816 | GRMZM2G408834 | 0.0703 |
GRMZM2G170472 | GRMZM2G347270 | 0.0496 |
GRMZM2G170472 | GRMZM5G868120 | 0.0622 |
GRMZM2G321023 | GRMZM2G347270 | 0.0445 |
GRMZM2G347270 | GRMZM2G355342 | 0.0386 |
GRMZM2G347270 | GRMZM2G392513 | 0.0356 |
GRMZM2G347270 | GRMZM2G408834 | 0.0609 |
GRMZM2G347270 | GRMZM5G812246 | 0.0377 |
GRMZM2G347270 | GRMZM5G868120 | 0.0886 |
GRMZM2G355342 | GRMZM5G868120 | 0.0471 |
GRMZM2G443091 | GRMZM5G861959 | 0.0351 |
GRMZM5G812246 | GRMZM5G868120 | 0.0362 |
umc1538a | GRMZM2G128771 | 0.0398 |