This page contains information for Module091, including a list of the genes within the module, the Gene Ontology enrichement analysis results, and a heatmap showing these genes' tissue specific expression patterns. Also included is a subnetwork for the genes within the module. For this subnetwork, a SIF file (check here for details of SIF file format) is provided for downloding, which can be opened and viewed within the Cytoscape software. Alternatively, the subnetwork can be also can be opened and visualized by clicking the link provided below.
Maize Gene | Symbol | Moule No. | Arabidopsis Homologue | Arabidopsis Homologue Symbol | Arabidopsis Homologue Name | Arabidopsis Homologue Description | Arabidopsis Homologue TF_Family |
---|---|---|---|---|---|---|---|
AC216793.3_FG008 | Module091 | AT1G30840 | PUP4 | purine permease 4 | purine permease 4 | ||
GRMZM2G004856 | Module091 | AT1G58370 | RXF12 | glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein | |||
GRMZM2G007698 | Module091 | AT3G48280 | CYP71A25 | cytochrome P450, family 71, subfamily A, polypeptide 25 | cytochrome P450, family 71, subfamily A, polypeptide 25 | ||
GRMZM2G000614 | Module091 | AT1G59870 | PEN3 | PENETRATION 3 | ABC-2 and Plant PDR ABC-type transporter family protein | ||
AC214524.3_FG002 | Module091 | AT3G26330 | CYP71B37 | cytochrome P450, family 71, subfamily B, polypeptide 37 | cytochrome P450, family 71, subfamily B, polypeptide 37 | ||
GRMZM2G023952 | Module091 | AT2G26170 | CYP711A1 | cytochrome P450, family 711, subfamily A, polypeptide 1 | cytochrome P450, family 711, subfamily A, polypeptide 1 | ||
GRMZM2G026532 | Module091 | AT5G36110 | CYP716A1 | cytochrome P450, family 716, subfamily A, polypeptide 1 | cytochrome P450, family 716, subfamily A, polypeptide 1 | ||
GRMZM2G033126 | Module091 | AT4G36470 | AT4G36470 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | |||
GRMZM2G038015 | bzip24 | Module091 | AT3G62420 | BZIP53 | basic region/leucine zipper motif 53 | basic region/leucine zipper motif 53 | bZIP |
GRMZM2G047715 | hb56 | Module091 | AT5G06710 | HAT14 | homeobox from Arabidopsis thaliana | homeobox from Arabidopsis thaliana | HB |
GRMZM2G055263 | gras61 | Module091 | AT4G08250 | AT4G08250 | GRAS family transcription factor | GRAS | |
GRMZM2G056851 | Module091 | ||||||
GRMZM2G008712 | Module091 | AT1G66140 | ZFP4 | zinc finger protein 4 | zinc finger protein 4 | C2H2 | |
GRMZM2G068808 | cpps3 | Module091 | AT4G02780 | GA1 | GA REQUIRING 1 | Terpenoid cyclases/Protein prenyltransferases superfamily protein | |
GRMZM2G072218 | Module091 | AT3G63470 | scpl40 | serine carboxypeptidase-like 40 | serine carboxypeptidase-like 40 | ||
GRMZM2G076936 | Module091 | AT1G67110 | CYP735A2 | cytochrome P450, family 735, subfamily A, polypeptide 2 | cytochrome P450, family 735, subfamily A, polypeptide 2 | ||
GRMZM2G089241 | Module091 | AT1G22360 | UGT85A2 | UDP-glucosyl transferase 85A2 | UDP-glucosyl transferase 85A2 | ||
GRMZM2G089803 | kao2 | Module091 | AT2G32440 | KAO2 | ent-kaurenoic acid hydroxylase 2 | ent-kaurenoic acid hydroxylase 2 | |
GRMZM2G089856 | Module091 | AT1G77330 | AT1G77330 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | |||
GRMZM2G091656 | gras9 | Module091 | AT3G54220 | SCR | SCARECROW | GRAS family transcription factor | GRAS |
GRMZM2G096029 | Module091 | AT1G11680 | CYP51G1 | CYTOCHROME P450 51G1 | CYTOCHROME P450 51G1 | ||
GRMZM2G099642 | Module091 | AT5G17000 | AT5G17000 | Zinc-binding dehydrogenase family protein | |||
GRMZM2G019872 | Module091 | AT5G17000 | AT5G17000 | Zinc-binding dehydrogenase family protein | |||
GRMZM2G130755 | Module091 | AT3G26280 | CYP71B4 | cytochrome P450, family 71, subfamily B, polypeptide 4 | cytochrome P450, family 71, subfamily B, polypeptide 4 | ||
GRMZM2G158342 | Module091 | AT4G12300 | CYP706A4 | cytochrome P450, family 706, subfamily A, polypeptide 4 | cytochrome P450, family 706, subfamily A, polypeptide 4 | ||
GRMZM2G158657 | ccd7 | Module091 | AT2G44990 | CCD7 | carotenoid cleavage dioxygenase 7 | carotenoid cleavage dioxygenase 7 | |
GRMZM2G160747 | Module091 | AT2G24580 | AT2G24580 | FAD-dependent oxidoreductase family protein | |||
GRMZM2G164967 | Module091 | AT3G63520 | CCD1 | carotenoid cleavage dioxygenase 1 | carotenoid cleavage dioxygenase 1 | ||
GRMZM2G312274 | Module091 | AT5G50760 | AT5G50760 | SAUR-like auxin-responsive protein family | |||
GRMZM2G359142 | Module091 | ||||||
GRMZM2G411177 | Module091 | AT3G03080 | AT3G03080 | Zinc-binding dehydrogenase family protein | |||
GRMZM2G446858 | ccd8 | Module091 | AT4G32810 | CCD8 | carotenoid cleavage dioxygenase 8 | carotenoid cleavage dioxygenase 8 | |
GRMZM2G451792 | Module091 | AT1G15520 | ABCG40 | ATP-binding cassette G40 | pleiotropic drug resistance 12 | ||
GRMZM2G462883 | Module091 | AT3G48690 | CXE12 | alpha/beta-Hydrolases superfamily protein | |||
GRMZM5G876638 | Module091 |
Module No. | Number of genes within the module | GO_Rank | GO ID | GO catogery | GO term | pValue | Number of genes with the GO within the module | Number of genes with the GO within the genome (background set) |
---|---|---|---|---|---|---|---|---|
Module091 | 35 | 1 | GO:0016491 | molecular_function | oxidoreductase activity | 3.99E-11 | 17 | 1587 |
Module091 | 35 | 2 | GO:0016705 | molecular_function | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 6.34E-10 | 10 | 403 |
Module091 | 35 | 3 | GO:0005506 | molecular_function | iron ion binding | 7.46E-09 | 9 | 376 |
Module091 | 35 | 4 | GO:0020037 | molecular_function | heme binding | 2.69E-08 | 9 | 436 |
Module091 | 35 | 5 | GO:0055114 | biological_process | oxidation-reduction process | 2.70E-08 | 14 | 1495 |
Module091 | 35 | 6 | GO:0046906 | molecular_function | tetrapyrrole binding | 3.27E-08 | 9 | 446 |
Module091 | 35 | 7 | GO:0004497 | molecular_function | monooxygenase activity | 8.44E-08 | 7 | 228 |
Module091 | 35 | 8 | GO:0009055 | molecular_function | electron carrier activity | 8.56E-08 | 9 | 499 |
Module091 | 35 | 9 | GO:0046247 | biological_process | terpene catabolic process | 9.11E-06 | 2 | 3 |
Module091 | 35 | 10 | GO:0016121 | biological_process | carotene catabolic process | 9.11E-06 | 2 | 3 |
Module091 | 35 | 11 | GO:0016124 | biological_process | xanthophyll catabolic process | 9.11E-06 | 2 | 3 |
Module091 | 35 | 12 | GO:0016110 | biological_process | tetraterpenoid catabolic process | 9.11E-06 | 2 | 3 |
Module091 | 35 | 13 | GO:0016118 | biological_process | carotenoid catabolic process | 9.11E-06 | 2 | 3 |
Module091 | 35 | 14 | GO:1901600 | biological_process | strigolactone metabolic process | 1.82E-05 | 2 | 4 |
Module091 | 35 | 15 | GO:1901601 | biological_process | strigolactone biosynthetic process | 1.82E-05 | 2 | 4 |
Module091 | 35 | 16 | GO:1901334 | biological_process | lactone metabolic process | 1.82E-05 | 2 | 4 |
Module091 | 35 | 17 | GO:1901336 | biological_process | lactone biosynthetic process | 1.82E-05 | 2 | 4 |
Module091 | 35 | 18 | GO:0046914 | molecular_function | transition metal ion binding | 2.61E-05 | 13 | 2226 |
Module091 | 35 | 19 | GO:0003824 | molecular_function | catalytic activity | 4.14E-05 | 25 | 8627 |
Module091 | 35 | 20 | GO:0008300 | biological_process | isoprenoid catabolic process | 6.35E-05 | 2 | 7 |
Module091 | 35 | 21 | GO:0016115 | biological_process | terpenoid catabolic process | 6.35E-05 | 2 | 7 |
Module091 | 35 | 22 | GO:0051213 | molecular_function | dioxygenase activity | 7.93E-05 | 4 | 136 |
Module091 | 35 | 23 | GO:0016702 | molecular_function | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | 9.31E-05 | 3 | 52 |
Module091 | 35 | 24 | GO:0044710 | biological_process | single-organism metabolic process | 0.000100245 | 16 | 3802 |
Module091 | 35 | 25 | GO:0010223 | biological_process | secondary shoot formation | 0.000108603 | 2 | 9 |
Module091 | 35 | 26 | GO:0010346 | biological_process | shoot axis formation | 0.000108603 | 2 | 9 |
Module091 | 35 | 27 | GO:0001763 | biological_process | morphogenesis of a branching structure | 0.000135606 | 2 | 10 |
Module091 | 35 | 28 | GO:0016701 | molecular_function | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen | 0.000142794 | 3 | 60 |
Module091 | 35 | 29 | GO:0016119 | biological_process | carotene metabolic process | 0.00016556 | 2 | 11 |
Module091 | 35 | 30 | GO:0016122 | biological_process | xanthophyll metabolic process | 0.000234284 | 2 | 13 |
Module091 | 35 | 31 | GO:0046872 | molecular_function | metal ion binding | 0.000265551 | 14 | 3184 |
Module091 | 35 | 32 | GO:0016106 | biological_process | sesquiterpenoid biosynthetic process | 0.000273034 | 2 | 14 |
Module091 | 35 | 33 | GO:0043169 | molecular_function | cation binding | 0.000276748 | 14 | 3196 |
Module091 | 35 | 34 | GO:0042214 | biological_process | terpene metabolic process | 0.000314697 | 2 | 15 |
Module091 | 35 | 35 | GO:0008152 | biological_process | metabolic process | 0.000506139 | 24 | 9826 |
Module091 | 35 | 36 | GO:0006714 | biological_process | sesquiterpenoid metabolic process | 0.000566363 | 2 | 20 |
Module091 | 35 | 37 | GO:0010817 | biological_process | regulation of hormone levels | 0.000759108 | 3 | 102 |
Module091 | 35 | 38 | GO:0016116 | biological_process | carotenoid metabolic process | 0.001282653 | 2 | 30 |
Module091 | 35 | 39 | GO:0016108 | biological_process | tetraterpenoid metabolic process | 0.001282653 | 2 | 30 |
Module091 | 35 | 40 | GO:0009926 | biological_process | auxin polar transport | 0.001744929 | 2 | 35 |
Module091 | 35 | 41 | GO:0044242 | biological_process | cellular lipid catabolic process | 0.002625281 | 2 | 43 |
Module091 | 35 | 42 | GO:0060918 | biological_process | auxin transport | 0.002871974 | 2 | 45 |
Module091 | 35 | 43 | GO:0009914 | biological_process | hormone transport | 0.002999262 | 2 | 46 |
Module091 | 35 | 44 | GO:0045549 | molecular_function | 9-cis-epoxycarotenoid dioxygenase activity | 0.005112278 | 1 | 3 |
Module091 | 35 | 45 | GO:0010436 | molecular_function | carotenoid dioxygenase activity | 0.005112278 | 1 | 3 |
Module091 | 35 | 46 | GO:0016042 | biological_process | lipid catabolic process | 0.005217469 | 2 | 61 |
Module091 | 35 | 47 | GO:0016114 | biological_process | terpenoid biosynthetic process | 0.006630898 | 2 | 69 |
Module091 | 35 | 48 | GO:0009691 | biological_process | cytokinin biosynthetic process | 0.007105556 | 1 | 4 |
Module091 | 35 | 49 | GO:0006721 | biological_process | terpenoid metabolic process | 0.011302103 | 2 | 91 |
Module091 | 35 | 50 | GO:0050403 | molecular_function | trans-zeatin O-beta-D-glucosyltransferase activity | 0.011889459 | 1 | 7 |
Module091 | 35 | 51 | GO:0008299 | biological_process | isoprenoid biosynthetic process | 0.013529652 | 2 | 100 |
Module091 | 35 | 52 | GO:0050502 | molecular_function | cis-zeatin O-beta-D-glucosyltransferase activity | 0.015261333 | 1 | 9 |
Module091 | 35 | 53 | GO:0043167 | molecular_function | ion binding | 0.015768082 | 16 | 5827 |
Module091 | 35 | 54 | GO:0048646 | biological_process | anatomical structure formation involved in morphogenesis | 0.016771259 | 2 | 112 |
Module091 | 35 | 55 | GO:0010016 | biological_process | shoot system morphogenesis | 0.017340864 | 2 | 114 |
Module091 | 35 | 56 | GO:0006720 | biological_process | isoprenoid metabolic process | 0.018800703 | 2 | 119 |
Module091 | 35 | 57 | GO:0009690 | biological_process | cytokinin metabolic process | 0.033322903 | 1 | 19 |
Module091 | 35 | 58 | GO:0042446 | biological_process | hormone biosynthetic process | 0.035046931 | 1 | 20 |
Module091 | 35 | 59 | GO:1901363 | molecular_function | heterocyclic compound binding | 0.042893987 | 16 | 6456 |
Module091 | 35 | 60 | GO:0097159 | molecular_function | organic cyclic compound binding | 0.043203353 | 16 | 6461 |
Module091 | 35 | 61 | GO:0034754 | biological_process | cellular hormone metabolic process | 0.047032888 | 1 | 27 |
Gene A | Gene B | Partial correlation coefficient |
---|---|---|
AC216793.3_FG008 | GRMZM2G056851 | 0.0425 |
GRMZM2G004856 | GRMZM2G056851 | 0.0402 |
GRMZM2G004856 | GRMZM2G089856 | 0.0449 |
GRMZM2G004856 | GRMZM2G359142 | 0.0572 |
GRMZM2G004856 | GRMZM2G411177 | 0.0411 |
GRMZM2G007698 | GRMZM2G000614 | 0.059 |
GRMZM2G007698 | GRMZM2G023952 | 0.0404 |
GRMZM2G007698 | GRMZM2G033126 | 0.0413 |
GRMZM2G007698 | cpps3 | 0.0727 |
GRMZM2G007698 | kao2 | 0.0395 |
GRMZM2G007698 | ccd7 | 0.0614 |
GRMZM2G007698 | GRMZM2G160747 | 0.0399 |
GRMZM2G007698 | ccd8 | 0.0672 |
GRMZM2G000614 | GRMZM2G026532 | 0.0901 |
GRMZM2G000614 | GRMZM2G033126 | 0.0421 |
GRMZM2G000614 | GRMZM2G056851 | 0.051 |
GRMZM2G000614 | cpps3 | 0.0558 |
GRMZM2G000614 | GRMZM2G072218 | 0.0645 |
GRMZM2G000614 | kao2 | 0.1269 |
GRMZM2G000614 | GRMZM2G096029 | 0.1085 |
GRMZM2G000614 | GRMZM2G158342 | 0.0543 |
GRMZM2G000614 | ccd7 | 0.0409 |
GRMZM2G000614 | GRMZM2G164967 | 0.0534 |
GRMZM2G000614 | GRMZM2G359142 | 0.0371 |
GRMZM2G000614 | ccd8 | 0.0616 |
GRMZM2G000614 | GRMZM5G876638 | 0.0402 |
AC214524.3_FG002 | gras61 | 0.0497 |
AC214524.3_FG002 | GRMZM2G056851 | 0.0624 |
AC214524.3_FG002 | GRMZM2G130755 | 0.0389 |
GRMZM2G023952 | GRMZM2G026532 | 0.0395 |
GRMZM2G023952 | GRMZM2G033126 | 0.057 |
GRMZM2G023952 | GRMZM2G096029 | 0.0352 |
GRMZM2G023952 | GRMZM2G158342 | 0.06 |
GRMZM2G023952 | ccd7 | 0.0461 |
GRMZM2G023952 | GRMZM2G164967 | 0.0447 |
GRMZM2G023952 | ccd8 | 0.0371 |
GRMZM2G026532 | GRMZM2G033126 | 0.0389 |
GRMZM2G026532 | hb56 | 0.0593 |
GRMZM2G026532 | gras61 | 0.0523 |
GRMZM2G026532 | GRMZM2G056851 | 0.0781 |
GRMZM2G026532 | GRMZM2G089241 | 0.036 |
GRMZM2G026532 | kao2 | 0.0886 |
GRMZM2G026532 | GRMZM2G096029 | 0.0938 |
GRMZM2G026532 | GRMZM2G158342 | 0.0373 |
GRMZM2G026532 | ccd7 | 0.043 |
GRMZM2G026532 | GRMZM2G164967 | 0.0412 |
GRMZM2G026532 | GRMZM2G359142 | 0.0592 |
GRMZM2G026532 | ccd8 | 0.0906 |
GRMZM2G033126 | bzip24 | 0.0589 |
GRMZM2G033126 | gras61 | 0.0391 |
GRMZM2G033126 | GRMZM2G056851 | 0.0492 |
GRMZM2G033126 | kao2 | 0.0434 |
GRMZM2G033126 | gras9 | 0.0373 |
GRMZM2G033126 | GRMZM2G099642 | 0.0424 |
GRMZM2G033126 | GRMZM2G158342 | 0.0538 |
GRMZM2G033126 | ccd7 | 0.0504 |
GRMZM2G033126 | GRMZM2G160747 | 0.0444 |
GRMZM2G033126 | GRMZM2G164967 | 0.0573 |
GRMZM2G033126 | ccd8 | 0.054 |
GRMZM2G033126 | GRMZM5G876638 | 0.0376 |
bzip24 | hb56 | 0.0387 |
bzip24 | GRMZM2G056851 | 0.0686 |
bzip24 | GRMZM2G089856 | 0.0675 |
bzip24 | GRMZM2G096029 | 0.0593 |
bzip24 | ccd7 | 0.0461 |
hb56 | GRMZM2G056851 | 0.0356 |
hb56 | GRMZM2G359142 | 0.0566 |
gras61 | GRMZM2G089241 | 0.0537 |
gras61 | kao2 | 0.0608 |
gras61 | GRMZM2G099642 | 0.0838 |
gras61 | GRMZM2G158342 | 0.0423 |
gras61 | ccd7 | 0.0785 |
GRMZM2G056851 | kao2 | 0.0512 |
GRMZM2G056851 | GRMZM2G089856 | 0.0793 |
GRMZM2G056851 | GRMZM2G096029 | 0.0694 |
GRMZM2G056851 | GRMZM2G359142 | 0.3974 |
GRMZM2G056851 | ccd8 | 0.0516 |
GRMZM2G056851 | GRMZM2G451792 | 0.0414 |
GRMZM2G056851 | GRMZM5G876638 | 0.0438 |
GRMZM2G008712 | GRMZM2G359142 | 0.0367 |
GRMZM2G072218 | GRMZM2G076936 | 0.0385 |
GRMZM2G072218 | kao2 | 0.0727 |
GRMZM2G072218 | GRMZM2G158342 | 0.0429 |
GRMZM2G072218 | GRMZM2G160747 | 0.0493 |
GRMZM2G076936 | GRMZM2G359142 | 0.0529 |
GRMZM2G089241 | kao2 | 0.0582 |
GRMZM2G089241 | GRMZM2G099642 | 0.0638 |
GRMZM2G089241 | GRMZM2G158342 | 0.0515 |
GRMZM2G089241 | GRMZM2G164967 | 0.0366 |
GRMZM2G089241 | GRMZM5G876638 | 0.0484 |
kao2 | gras9 | 0.0652 |
kao2 | GRMZM2G096029 | 0.0961 |
kao2 | GRMZM2G099642 | 0.1182 |
kao2 | GRMZM2G158342 | 0.092 |
kao2 | ccd7 | 0.0745 |
kao2 | GRMZM2G160747 | 0.0375 |
kao2 | GRMZM2G164967 | 0.1078 |
kao2 | GRMZM2G312274 | 0.0402 |
kao2 | GRMZM2G359142 | 0.0549 |
kao2 | ccd8 | 0.0652 |
kao2 | GRMZM5G876638 | 0.0742 |
GRMZM2G089856 | GRMZM2G359142 | 0.0644 |
gras9 | GRMZM2G158342 | 0.0729 |
gras9 | ccd7 | 0.0756 |
gras9 | GRMZM2G164967 | 0.0602 |
gras9 | GRMZM2G359142 | 0.0486 |
gras9 | ccd8 | 0.0588 |
gras9 | GRMZM2G462883 | 0.0408 |
gras9 | GRMZM5G876638 | 0.0422 |
GRMZM2G096029 | GRMZM2G099642 | 0.0539 |
GRMZM2G096029 | GRMZM2G158342 | 0.0614 |
GRMZM2G096029 | GRMZM2G160747 | 0.0472 |
GRMZM2G096029 | GRMZM2G164967 | 0.0473 |
GRMZM2G096029 | GRMZM2G359142 | 0.0753 |
GRMZM2G096029 | GRMZM2G411177 | 0.0461 |
GRMZM2G096029 | ccd8 | 0.0708 |
GRMZM2G096029 | GRMZM5G876638 | 0.0371 |
GRMZM2G099642 | GRMZM2G019872 | 0.0702 |
GRMZM2G099642 | GRMZM2G130755 | 0.0432 |
GRMZM2G099642 | GRMZM2G158342 | 0.0522 |
GRMZM2G099642 | GRMZM5G876638 | 0.0537 |
GRMZM2G158342 | ccd7 | 0.0442 |
GRMZM2G158342 | GRMZM2G164967 | 0.0683 |
GRMZM2G158342 | GRMZM2G312274 | 0.0392 |
GRMZM2G158342 | GRMZM2G359142 | 0.0373 |
GRMZM2G158342 | ccd8 | 0.0496 |
GRMZM2G158342 | GRMZM5G876638 | 0.0468 |
ccd7 | GRMZM2G164967 | 0.0552 |
ccd7 | ccd8 | 0.0693 |
GRMZM2G164967 | ccd8 | 0.063 |
GRMZM2G359142 | ccd8 | 0.0402 |
GRMZM2G359142 | GRMZM2G451792 | 0.0537 |
ccd8 | GRMZM5G876638 | 0.0525 |