This page contains information for Module103, including a list of the genes within the module, the Gene Ontology enrichement analysis results, and a heatmap showing these genes' tissue specific expression patterns. Also included is a subnetwork for the genes within the module. For this subnetwork, a SIF file (check here for details of SIF file format) is provided for downloding, which can be opened and viewed within the Cytoscape software. Alternatively, the subnetwork can be also can be opened and visualized by clicking the link provided below.
Maize Gene | Symbol | Moule No. | Arabidopsis Homologue | Arabidopsis Homologue Symbol | Arabidopsis Homologue Name | Arabidopsis Homologue Description | Arabidopsis Homologue TF_Family |
---|---|---|---|---|---|---|---|
GRMZM2G004012 | umc1431 | Module103 | AT2G02850 | ARPN | plantacyanin | plantacyanin | |
GRMZM2G003368 | sacd4 | Module103 | AT3G02610 | AT3G02610 | Plant stearoyl-acyl-carrier-protein desaturase family protein | ||
GRMZM2G028046 | Module103 | AT1G75710 | AT1G75710 | C2H2-like zinc finger protein | C2H2 | ||
GRMZM2G039187 | Module103 | AT4G14750 | IQD19 | IQ-domain 19 | IQ-domain 19 | ||
GRMZM2G019612 | Module103 | AT2G30370 | CHAL | CHALLAH | allergen-related | ||
GRMZM2G075255 | Module103 | AT1G02205 | CER1 | ECERIFERUM 1 | Fatty acid hydroxylase superfamily | ||
GRMZM2G080442 | Module103 | ||||||
GRMZM2G098594 | grftf7 | Module103 | AT3G13960 | GRF5 | growth-regulating factor 5 | growth-regulating factor 5 | GRF |
GRMZM2G099097 | Module103 | AT1G02205 | CER1 | ECERIFERUM 1 | Fatty acid hydroxylase superfamily | ||
GRMZM2G112210 | Module103 | AT5G42510 | AT5G42510 | Disease resistance-responsive (dirigent-like protein) family protein | |||
GRMZM2G119359 | Module103 | AT2G36400 | GRF3 | growth-regulating factor 3 | growth-regulating factor 3 | GRF | |
GRMZM2G147857 | Module103 | AT5G62710 | AT5G62710 | Leucine-rich repeat protein kinase family protein | |||
GRMZM2G168404 | Module103 | AT5G42650 | AOS | allene oxide synthase | allene oxide synthase | ||
GRMZM2G172320 | Module103 | AT5G20635 | AGG3 | Arabidopsis G protein gamma subunit 3 | |||
GRMZM2G178182 | bhlh23 | Module103 | AT5G50915 | AT5G50915 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | bHLH | |
GRMZM2G178686 | Module103 | ||||||
GRMZM2G180246 | gif1 | Module103 | AT5G28640 | AN3 | ANGUSTIFOLIA 3 | SSXT family protein | |
GRMZM2G301512 | Module103 | AT5G57035 | AT5G57035 | U-box domain-containing protein kinase family protein | |||
GRMZM2G314667 | Module103 | ||||||
GRMZM2G377217 | wrky98 | Module103 | AT2G44745 | WRKY12 | WRKY DNA-binding protein 12 | WRKY family transcription factor | WRKY |
GRMZM2G037386 | Module103 | AT2G26700 | PID2 | PINOID2 | AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein | ||
GRMZM2G377694 | Module103 | AT5G06270 | AT5G06270 | ||||
GRMZM2G391795 | Module103 | AT5G06570 | AT5G06570 | alpha/beta-Hydrolases superfamily protein | |||
GRMZM2G405804 | Module103 | AT3G48770 | AT3G48770 | DNA binding;ATP binding | |||
GRMZM2G431504 | Module103 | AT1G61720 | BAN | BANYULS | NAD(P)-binding Rossmann-fold superfamily protein | ||
GRMZM2G431714 | Module103 | AT3G04080 | APY1 | apyrase 1 | apyrase 1 | ||
GRMZM2G456512 | Module103 | AT1G21740 | AT1G21740 | Protein of unknown function (DUF630 and DUF632) | |||
GRMZM2G476685 | Module103 | AT1G70210 | CYCD1;1 | CYCLIN D1;1 | CYCLIN D1;1 | ||
GRMZM2G480903 | Module103 | AT3G02000 | ROXY1 | Thioredoxin superfamily protein | |||
GRMZM2G702036 | Module103 | AT2G30370 | CHAL | CHALLAH | allergen-related | ||
GRMZM5G870629 | Module103 | AT1G17840 | ABCG11 | ATP-binding cassette G11 | white-brown complex homolog protein 11 |
Module No. | Number of genes within the module | GO_Rank | GO ID | GO catogery | GO term | pValue | Number of genes with the GO within the module | Number of genes with the GO within the genome (background set) |
---|---|---|---|---|---|---|---|---|
Module103 | 31 | 1 | GO:0098552 | cellular_component | side of membrane | 9.82E-05 | 2 | 18 |
Module103 | 31 | 2 | GO:0006631 | biological_process | fatty acid metabolic process | 0.00171129 | 3 | 221 |
Module103 | 31 | 3 | GO:0071771 | molecular_function | aldehyde decarbonylase activity | 0.00255879 | 1 | 2 |
Module103 | 31 | 4 | GO:0048827 | biological_process | phyllome development | 0.003155849 | 3 | 274 |
Module103 | 31 | 5 | GO:0048451 | biological_process | petal formation | 0.003335802 | 1 | 3 |
Module103 | 31 | 6 | GO:0009897 | cellular_component | external side of plasma membrane | 0.004257729 | 1 | 5 |
Module103 | 31 | 7 | GO:0046185 | biological_process | aldehyde catabolic process | 0.004445425 | 1 | 4 |
Module103 | 31 | 8 | GO:0080051 | biological_process | cutin transport | 0.004445425 | 1 | 4 |
Module103 | 31 | 9 | GO:0044459 | cellular_component | plasma membrane part | 0.005046237 | 2 | 129 |
Module103 | 31 | 10 | GO:0048446 | biological_process | petal morphogenesis | 0.005553896 | 1 | 5 |
Module103 | 31 | 11 | GO:0005834 | cellular_component | heterotrimeric G-protein complex | 0.006804624 | 1 | 8 |
Module103 | 31 | 12 | GO:0031234 | cellular_component | extrinsic component of cytoplasmic side of plasma membrane | 0.007652302 | 1 | 9 |
Module103 | 31 | 13 | GO:0019897 | cellular_component | extrinsic component of plasma membrane | 0.007652302 | 1 | 9 |
Module103 | 31 | 14 | GO:0048448 | biological_process | stamen morphogenesis | 0.008872401 | 1 | 8 |
Module103 | 31 | 15 | GO:0009898 | cellular_component | cytoplasmic side of plasma membrane | 0.009345727 | 1 | 11 |
Module103 | 31 | 16 | GO:0032787 | biological_process | monocarboxylic acid metabolic process | 0.009751145 | 3 | 411 |
Module103 | 31 | 17 | GO:0098562 | cellular_component | cytoplasmic side of membrane | 0.011036584 | 1 | 13 |
Module103 | 31 | 18 | GO:0009986 | cellular_component | cell surface | 0.011036584 | 1 | 13 |
Module103 | 31 | 19 | GO:0005506 | molecular_function | iron ion binding | 0.011694729 | 3 | 376 |
Module103 | 31 | 20 | GO:0006633 | biological_process | fatty acid biosynthetic process | 0.012820311 | 2 | 157 |
Module103 | 31 | 21 | GO:0045300 | molecular_function | acyl-[acyl-carrier-protein] desaturase activity | 0.013996379 | 1 | 11 |
Module103 | 31 | 22 | GO:0042335 | biological_process | cuticle development | 0.015478427 | 1 | 14 |
Module103 | 31 | 23 | GO:0048465 | biological_process | corolla development | 0.015478427 | 1 | 14 |
Module103 | 31 | 24 | GO:0048441 | biological_process | petal development | 0.015478427 | 1 | 14 |
Module103 | 31 | 25 | GO:0048367 | biological_process | shoot system development | 0.015688593 | 3 | 490 |
Module103 | 31 | 26 | GO:0099402 | biological_process | plant organ development | 0.018570813 | 3 | 522 |
Module103 | 31 | 27 | GO:0048366 | biological_process | leaf development | 0.018770426 | 2 | 192 |
Module103 | 31 | 28 | GO:0044255 | biological_process | cellular lipid metabolic process | 0.020216312 | 3 | 539 |
Module103 | 31 | 29 | GO:0010025 | biological_process | wax biosynthetic process | 0.020952032 | 1 | 19 |
Module103 | 31 | 30 | GO:0010166 | biological_process | wax metabolic process | 0.023133511 | 1 | 21 |
Module103 | 31 | 31 | GO:0009055 | molecular_function | electron carrier activity | 0.024762618 | 3 | 499 |
Module103 | 31 | 32 | GO:0048449 | biological_process | floral organ formation | 0.025310452 | 1 | 23 |
Module103 | 31 | 33 | GO:0072330 | biological_process | monocarboxylic acid biosynthetic process | 0.025467341 | 2 | 226 |
Module103 | 31 | 34 | GO:0009955 | biological_process | adaxial/abaxial pattern specification | 0.027482865 | 1 | 25 |
Module103 | 31 | 35 | GO:0007186 | biological_process | G-protein coupled receptor signaling pathway | 0.028567376 | 1 | 26 |
Module103 | 31 | 36 | GO:0048653 | biological_process | anther development | 0.030733012 | 1 | 28 |
Module103 | 31 | 37 | GO:0098797 | cellular_component | plasma membrane protein complex | 0.031127703 | 1 | 37 |
Module103 | 31 | 38 | GO:0048444 | biological_process | floral organ morphogenesis | 0.032894142 | 1 | 30 |
Module103 | 31 | 39 | GO:0048825 | biological_process | cotyledon development | 0.032894142 | 1 | 30 |
Module103 | 31 | 40 | GO:0048563 | biological_process | post-embryonic organ morphogenesis | 0.032894142 | 1 | 30 |
Module103 | 31 | 41 | GO:0016717 | molecular_function | oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | 0.034022117 | 1 | 27 |
Module103 | 31 | 42 | GO:0019898 | cellular_component | extrinsic component of membrane | 0.034440713 | 1 | 41 |
Module103 | 31 | 43 | GO:0043167 | molecular_function | ion binding | 0.035095984 | 12 | 5827 |
Module103 | 31 | 44 | GO:0016491 | molecular_function | oxidoreductase activity | 0.04612589 | 5 | 1587 |
Module103 | 31 | 45 | GO:1902494 | cellular_component | catalytic complex | 0.049530206 | 2 | 431 |
Gene A | Gene B | Partial correlation coefficient |
---|---|---|
umc1431 | sacd4 | 0.0398 |
umc1431 | GRMZM2G112210 | 0.0464 |
umc1431 | GRMZM2G314667 | 0.0399 |
umc1431 | GRMZM5G870629 | 0.0366 |
sacd4 | GRMZM2G112210 | 0.0378 |
sacd4 | GRMZM5G870629 | 0.045 |
GRMZM2G028046 | bhlh23 | 0.0471 |
GRMZM2G028046 | GRMZM2G702036 | 0.0441 |
GRMZM2G039187 | GRMZM2G019612 | 0.0359 |
GRMZM2G019612 | GRMZM2G112210 | 0.0456 |
GRMZM2G019612 | GRMZM2G702036 | 0.068 |
GRMZM2G075255 | GRMZM2G099097 | 0.038 |
GRMZM2G075255 | GRMZM2G112210 | 0.0388 |
GRMZM2G080442 | GRMZM2G112210 | 0.0505 |
GRMZM2G080442 | bhlh23 | 0.0543 |
GRMZM2G080442 | wrky98 | 0.0572 |
grftf7 | GRMZM2G119359 | 0.0389 |
GRMZM2G112210 | GRMZM2G119359 | 0.0389 |
GRMZM2G112210 | GRMZM2G147857 | 0.038 |
GRMZM2G112210 | GRMZM2G168404 | 0.0656 |
GRMZM2G112210 | GRMZM2G172320 | 0.0397 |
GRMZM2G112210 | bhlh23 | 0.0719 |
GRMZM2G112210 | GRMZM2G178686 | 0.049 |
GRMZM2G112210 | gif1 | 0.0407 |
GRMZM2G112210 | GRMZM2G314667 | 0.0691 |
GRMZM2G112210 | wrky98 | 0.0518 |
GRMZM2G112210 | GRMZM2G391795 | 0.0447 |
GRMZM2G112210 | GRMZM2G405804 | 0.0377 |
GRMZM2G112210 | GRMZM2G702036 | 0.0363 |
GRMZM2G168404 | bhlh23 | 0.0491 |
GRMZM2G168404 | GRMZM2G301512 | 0.0367 |
GRMZM2G168404 | GRMZM2G314667 | 0.044 |
GRMZM2G168404 | GRMZM2G431504 | 0.0356 |
GRMZM2G168404 | GRMZM2G431714 | 0.0378 |
GRMZM2G168404 | GRMZM2G476685 | 0.0456 |
bhlh23 | wrky98 | 0.0378 |
bhlh23 | GRMZM2G377694 | 0.0496 |
GRMZM2G178686 | wrky98 | 0.0431 |
GRMZM2G178686 | GRMZM2G456512 | 0.0378 |
wrky98 | GRMZM2G037386 | 0.0392 |
wrky98 | GRMZM2G377694 | 0.0355 |
wrky98 | GRMZM2G480903 | 0.0379 |