This page contains information for Module110, including a list of the genes within the module, the Gene Ontology enrichement analysis results, and a heatmap showing these genes' tissue specific expression patterns. Also included is a subnetwork for the genes within the module. For this subnetwork, a SIF file (check here for details of SIF file format) is provided for downloding, which can be opened and viewed within the Cytoscape software. Alternatively, the subnetwork can be also can be opened and visualized by clicking the link provided below.
Maize Gene | Symbol | Moule No. | Arabidopsis Homologue | Arabidopsis Homologue Symbol | Arabidopsis Homologue Name | Arabidopsis Homologue Description | Arabidopsis Homologue TF_Family |
---|---|---|---|---|---|---|---|
AC205496.3_FG002 | Module110 | ||||||
GRMZM2G013855 | Module110 | ||||||
GRMZM2G016351 | Module110 | ||||||
GRMZM2G021095 | lbd4 | Module110 | AT2G28500 | LBD11 | LOB domain-containing protein 11 | LOB domain-containing protein 11 | LOB |
GRMZM2G035620 | Module110 | AT2G32520 | AT2G32520 | alpha/beta-Hydrolases superfamily protein | |||
GRMZM2G036245 | Module110 | ||||||
GRMZM2G051427 | Module110 | ||||||
GRMZM2G067833 | Module110 | ||||||
GRMZM2G100060 | Module110 | AT3G45130 | LAS1 | lanosterol synthase 1 | lanosterol synthase 1 | ||
GRMZM2G101053 | Module110 | AT3G15750 | AT3G15750 | Essential protein Yae1, N-terminal | |||
GRMZM2G119407 | Module110 | AT3G49601 | AT3G49601 | ||||
GRMZM2G124357 | Module110 | ||||||
GRMZM2G140730 | Module110 | ||||||
GRMZM2G170689 | Module110 | AT2G41530 | SFGH | S-formylglutathione hydrolase | S-formylglutathione hydrolase | ||
GRMZM2G177373 | Module110 | ||||||
GRMZM2G321394 | Module110 | AT3G11570 | TBL8 | TRICHOME BIREFRINGENCE-LIKE 8 | TRICHOME BIREFRINGENCE-LIKE 8 | ||
GRMZM2G326869 | Module110 | AT2G29200 | PUM1 | pumilio 1 | pumilio 1 | ||
GRMZM2G373685 | Module110 | AT3G60590 | AT3G60590 | ||||
GRMZM2G378949 | Module110 | AT5G66210 | CPK28 | calcium-dependent protein kinase 28 | calcium-dependent protein kinase 28 | ||
GRMZM2G384516 | Module110 | AT5G14460 | AT5G14460 | Pseudouridine synthase family protein | |||
GRMZM2G432839 | Module110 | ||||||
GRMZM2G451769 | Module110 | AT4G02090 | AT4G02090 | ||||
GRMZM2G471321 | Module110 | AT3G05330 | ATN | TANGLED | cyclin family | ||
GRMZM2G475971 | Module110 | AT4G02090 | AT4G02090 | ||||
GRMZM2G491096 | Module110 | ||||||
GRMZM2G518751 | Module110 | ||||||
GRMZM5G845279 | Module110 | ||||||
GRMZM5G861093 | Module110 | AT5G27945 | AT5G27945 | Transducin/WD40 repeat-like superfamily protein | |||
GRMZM5G871457 | Module110 | ||||||
GRMZM5G889643 | Module110 |
Module No. | Number of genes within the module | GO_Rank | GO ID | GO catogery | GO term | pValue | Number of genes with the GO within the module | Number of genes with the GO within the genome (background set) |
---|---|---|---|---|---|---|---|---|
Module110 | 30 | 1 | GO:0016866 | molecular_function | intramolecular transferase activity | 0.000382479 | 2 | 71 |
Module110 | 30 | 2 | GO:0010263 | biological_process | tricyclic triterpenoid biosynthetic process | 0.00074195 | 1 | 2 |
Module110 | 30 | 3 | GO:0010683 | biological_process | tricyclic triterpenoid metabolic process | 0.00074195 | 1 | 2 |
Module110 | 30 | 4 | GO:0016104 | biological_process | triterpenoid biosynthetic process | 0.002594898 | 1 | 7 |
Module110 | 30 | 5 | GO:0006722 | biological_process | triterpenoid metabolic process | 0.002594898 | 1 | 7 |
Module110 | 30 | 6 | GO:0031559 | molecular_function | oxidosqualene cyclase activity | 0.0029838 | 1 | 7 |
Module110 | 30 | 7 | GO:0046417 | biological_process | chorismate metabolic process | 0.005184406 | 1 | 14 |
Module110 | 30 | 8 | GO:0016853 | molecular_function | isomerase activity | 0.005761044 | 2 | 280 |
Module110 | 30 | 9 | GO:0009678 | molecular_function | hydrogen-translocating pyrophosphatase activity | 0.007233132 | 1 | 17 |
Module110 | 30 | 10 | GO:0001522 | biological_process | pseudouridine synthesis | 0.010347287 | 1 | 28 |
Module110 | 30 | 11 | GO:0004427 | molecular_function | inorganic diphosphatase activity | 0.010621412 | 1 | 25 |
Module110 | 30 | 12 | GO:0009982 | molecular_function | pseudouridine synthase activity | 0.011044249 | 1 | 26 |
Module110 | 30 | 13 | GO:0010043 | biological_process | response to zinc ion | 0.021338435 | 1 | 58 |
Module110 | 30 | 14 | GO:0016114 | biological_process | terpenoid biosynthetic process | 0.025343965 | 1 | 69 |
Module110 | 30 | 15 | GO:0003723 | molecular_function | RNA binding | 0.025682466 | 2 | 611 |
Module110 | 30 | 16 | GO:0043648 | biological_process | dicarboxylic acid metabolic process | 0.025707452 | 1 | 70 |
Module110 | 30 | 17 | GO:1990267 | biological_process | response to transition metal nanoparticle | 0.032231709 | 1 | 88 |
Module110 | 30 | 18 | GO:0009451 | biological_process | RNA modification | 0.033315679 | 1 | 91 |
Module110 | 30 | 19 | GO:0006721 | biological_process | terpenoid metabolic process | 0.033315679 | 1 | 91 |
Module110 | 30 | 20 | GO:0006818 | biological_process | hydrogen transport | 0.035480705 | 1 | 97 |
Module110 | 30 | 21 | GO:0015992 | biological_process | proton transport | 0.035480705 | 1 | 97 |
Module110 | 30 | 22 | GO:0008299 | biological_process | isoprenoid biosynthetic process | 0.036561762 | 1 | 100 |
Module110 | 30 | 23 | GO:0006720 | biological_process | isoprenoid metabolic process | 0.043385969 | 1 | 119 |
Gene A | Gene B | Partial correlation coefficient |
---|---|---|
AC205496.3_FG002 | GRMZM2G013855 | 0.0394 |
AC205496.3_FG002 | GRMZM2G067833 | 0.0756 |
AC205496.3_FG002 | GRMZM2G119407 | 0.0606 |
AC205496.3_FG002 | GRMZM2G140730 | 0.0475 |
AC205496.3_FG002 | GRMZM2G170689 | 0.0609 |
AC205496.3_FG002 | GRMZM2G378949 | 0.0442 |
AC205496.3_FG002 | GRMZM2G384516 | 0.0479 |
AC205496.3_FG002 | GRMZM2G432839 | 0.0366 |
AC205496.3_FG002 | GRMZM5G871457 | 0.08 |
GRMZM2G013855 | lbd4 | 0.0646 |
GRMZM2G013855 | GRMZM2G067833 | 0.0561 |
GRMZM2G013855 | GRMZM2G119407 | 0.0739 |
GRMZM2G013855 | GRMZM2G124357 | 0.0404 |
GRMZM2G013855 | GRMZM2G177373 | 0.0508 |
GRMZM2G013855 | GRMZM2G321394 | 0.0359 |
GRMZM2G013855 | GRMZM2G378949 | 0.0707 |
GRMZM2G013855 | GRMZM2G432839 | 0.0443 |
GRMZM2G013855 | GRMZM2G475971 | 0.0388 |
GRMZM2G013855 | GRMZM2G518751 | 0.0625 |
GRMZM2G013855 | GRMZM5G845279 | 0.0393 |
GRMZM2G013855 | GRMZM5G861093 | 0.04 |
GRMZM2G013855 | GRMZM5G871457 | 0.0487 |
GRMZM2G016351 | GRMZM2G100060 | 0.0705 |
GRMZM2G016351 | GRMZM5G845279 | 0.0597 |
lbd4 | GRMZM2G119407 | 0.0627 |
lbd4 | GRMZM2G475971 | 0.0615 |
GRMZM2G035620 | GRMZM2G067833 | -0.0363 |
GRMZM2G035620 | GRMZM2G119407 | -0.0718 |
GRMZM2G035620 | GRMZM2G326869 | -0.0606 |
GRMZM2G035620 | GRMZM2G373685 | -0.0365 |
GRMZM2G035620 | GRMZM2G518751 | -0.064 |
GRMZM2G035620 | GRMZM5G871457 | -0.0668 |
GRMZM2G036245 | GRMZM2G051427 | 0.0423 |
GRMZM2G036245 | GRMZM2G119407 | 0.0355 |
GRMZM2G036245 | GRMZM5G861093 | 0.0374 |
GRMZM2G051427 | GRMZM2G119407 | 0.041 |
GRMZM2G051427 | GRMZM2G321394 | 0.0359 |
GRMZM2G067833 | GRMZM2G119407 | 0.0647 |
GRMZM2G067833 | GRMZM2G170689 | 0.0627 |
GRMZM2G067833 | GRMZM2G326869 | 0.0403 |
GRMZM2G067833 | GRMZM2G491096 | 0.0463 |
GRMZM2G067833 | GRMZM2G518751 | 0.068 |
GRMZM2G067833 | GRMZM5G861093 | 0.0532 |
GRMZM2G067833 | GRMZM5G871457 | 0.0632 |
GRMZM2G100060 | GRMZM5G845279 | 0.0531 |
GRMZM2G101053 | GRMZM2G321394 | -0.0358 |
GRMZM2G119407 | GRMZM2G124357 | 0.0693 |
GRMZM2G119407 | GRMZM2G170689 | 0.0441 |
GRMZM2G119407 | GRMZM2G177373 | 0.0471 |
GRMZM2G119407 | GRMZM2G321394 | 0.0464 |
GRMZM2G119407 | GRMZM2G326869 | 0.1164 |
GRMZM2G119407 | GRMZM2G373685 | 0.0574 |
GRMZM2G119407 | GRMZM2G378949 | 0.0391 |
GRMZM2G119407 | GRMZM2G384516 | 0.0782 |
GRMZM2G119407 | GRMZM2G471321 | 0.0564 |
GRMZM2G119407 | GRMZM2G475971 | 0.0505 |
GRMZM2G119407 | GRMZM5G861093 | 0.0928 |
GRMZM2G119407 | GRMZM5G871457 | 0.0769 |
GRMZM2G119407 | GRMZM5G889643 | 0.0366 |
GRMZM2G124357 | GRMZM2G177373 | 0.0391 |
GRMZM2G124357 | GRMZM2G326869 | 0.0434 |
GRMZM2G124357 | GRMZM2G432839 | 0.0388 |
GRMZM2G124357 | GRMZM5G861093 | 0.0416 |
GRMZM2G140730 | GRMZM2G378949 | 0.0587 |
GRMZM2G140730 | GRMZM2G432839 | 0.0703 |
GRMZM2G170689 | GRMZM5G871457 | 0.0367 |
GRMZM2G177373 | GRMZM2G326869 | 0.05 |
GRMZM2G177373 | GRMZM2G373685 | 0.0598 |
GRMZM2G177373 | GRMZM2G384516 | 0.0495 |
GRMZM2G177373 | GRMZM2G518751 | 0.0474 |
GRMZM2G177373 | GRMZM5G861093 | 0.0589 |
GRMZM2G321394 | GRMZM2G378949 | 0.0412 |
GRMZM2G326869 | GRMZM2G373685 | 0.0379 |
GRMZM2G326869 | GRMZM2G384516 | 0.0403 |
GRMZM2G326869 | GRMZM2G491096 | 0.0359 |
GRMZM2G326869 | GRMZM5G861093 | 0.0476 |
GRMZM2G326869 | GRMZM5G871457 | 0.0437 |
GRMZM2G326869 | GRMZM5G889643 | 0.036 |
GRMZM2G373685 | GRMZM2G378949 | 0.0387 |
GRMZM2G373685 | GRMZM2G384516 | 0.0394 |
GRMZM2G373685 | GRMZM2G518751 | 0.0366 |
GRMZM2G373685 | GRMZM5G861093 | 0.044 |
GRMZM2G378949 | GRMZM2G384516 | 0.0432 |
GRMZM2G451769 | GRMZM2G475971 | 0.0507 |
GRMZM2G491096 | GRMZM2G518751 | 0.0601 |
GRMZM2G491096 | GRMZM5G861093 | 0.0382 |
GRMZM2G518751 | GRMZM5G861093 | 0.0385 |
GRMZM2G518751 | GRMZM5G871457 | 0.0459 |
GRMZM5G861093 | GRMZM5G871457 | 0.0667 |