This page contains information for Module122, including a list of the genes within the module, the Gene Ontology enrichement analysis results, and a heatmap showing these genes' tissue specific expression patterns. Also included is a subnetwork for the genes within the module. For this subnetwork, a SIF file (check here for details of SIF file format) is provided for downloding, which can be opened and viewed within the Cytoscape software. Alternatively, the subnetwork can be also can be opened and visualized by clicking the link provided below.
Maize Gene | Symbol | Moule No. | Arabidopsis Homologue | Arabidopsis Homologue Symbol | Arabidopsis Homologue Name | Arabidopsis Homologue Description | Arabidopsis Homologue TF_Family |
---|---|---|---|---|---|---|---|
GRMZM2G001247 | Module122 | AT3G16660 | AT3G16660 | Pollen Ole e 1 allergen and extensin family protein | |||
GRMZM2G000221 | Module122 | AT5G48485 | DIR1 | DEFECTIVE IN INDUCED RESISTANCE 1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein | ||
GRMZM2G000836 | Module122 | AT3G20880 | WIP4 | WIP domain protein 4 | WIP domain protein 4 | C2H2 | |
GRMZM2G016462 | Module122 | ||||||
GRMZM2G026804 | Module122 | AT1G02460 | AT1G02460 | Pectin lyase-like superfamily protein | |||
GRMZM2G031167 | Module122 | AT1G77380 | AAP3 | amino acid permease 3 | amino acid permease 3 | ||
GRMZM2G030216 | Module122 | AT3G30340 | UMAMIT32 | Usually multiple acids move in and out Transporters 32 | nodulin MtN21 /EamA-like transporter family protein | ||
GRMZM2G036365 | Module122 | AT1G64830 | AT1G64830 | Eukaryotic aspartyl protease family protein | |||
GRMZM2G049990 | Module122 | ||||||
GRMZM2G061929 | Module122 | ||||||
GRMZM2G071771 | Module122 | AT5G48485 | DIR1 | DEFECTIVE IN INDUCED RESISTANCE 1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein | ||
GRMZM2G072383 | Module122 | ||||||
GRMZM2G078024 | Module122 | AT2G39890 | PROT1 | proline transporter 1 | proline transporter 1 | ||
GRMZM2G089574 | Module122 | ||||||
GRMZM2G093490 | Module122 | AT4G29990 | AT4G29990 | Leucine-rich repeat transmembrane protein kinase protein | |||
GRMZM2G112039 | Module122 | AT1G33440 | AT1G33440 | Major facilitator superfamily protein | |||
GRMZM2G141036 | Module122 | AT5G10770 | AT5G10770 | Eukaryotic aspartyl protease family protein | |||
GRMZM2G152079 | Module122 | ||||||
GRMZM2G158013 | Module122 | AT3G51895 | SULTR3;1 | sulfate transporter 3;1 | sulfate transporter 3;1 | ||
GRMZM2G166940 | Module122 | AT3G02350 | GAUT9 | galacturonosyltransferase 9 | galacturonosyltransferase 9 | ||
GRMZM2G170388 | Module122 | AT1G02460 | AT1G02460 | Pectin lyase-like superfamily protein | |||
GRMZM2G180160 | Module122 | AT1G21230 | WAK5 | wall associated kinase 5 | wall associated kinase 5 | ||
GRMZM2G313058 | Module122 | AT1G61660 | AT1G61660 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | bHLH | ||
GRMZM2G410352 | Module122 | ||||||
GRMZM2G431039 | Module122 | AT5G55180 | AT5G55180 | O-Glycosyl hydrolases family 17 protein | |||
GRMZM2G450044 | Module122 | AT5G03890 | AT5G03890 | ||||
GRMZM5G801307 | Module122 |
Module No. | Number of genes within the module | GO_Rank | GO ID | GO catogery | GO term | pValue | Number of genes with the GO within the module | Number of genes with the GO within the genome (background set) |
---|---|---|---|---|---|---|---|---|
Module122 | 27 | 1 | GO:0004650 | molecular_function | polygalacturonase activity | 0.000667625 | 2 | 49 |
Module122 | 27 | 2 | GO:0070001 | molecular_function | aspartic-type peptidase activity | 0.002534948 | 2 | 96 |
Module122 | 27 | 3 | GO:0004190 | molecular_function | aspartic-type endopeptidase activity | 0.002534948 | 2 | 96 |
Module122 | 27 | 4 | GO:0004553 | molecular_function | hydrolase activity, hydrolyzing O-glycosyl compounds | 0.003193794 | 3 | 390 |
Module122 | 27 | 5 | GO:0015804 | biological_process | neutral amino acid transport | 0.003705346 | 1 | 5 |
Module122 | 27 | 6 | GO:0016798 | molecular_function | hydrolase activity, acting on glycosyl bonds | 0.003962836 | 3 | 421 |
Module122 | 27 | 7 | GO:0008509 | molecular_function | anion transmembrane transporter activity | 0.004386669 | 2 | 127 |
Module122 | 27 | 8 | GO:0015800 | biological_process | acidic amino acid transport | 0.005184022 | 1 | 7 |
Module122 | 27 | 9 | GO:0008271 | molecular_function | secondary active sulfate transmembrane transporter activity | 0.007111568 | 1 | 9 |
Module122 | 27 | 10 | GO:0015116 | molecular_function | sulfate transmembrane transporter activity | 0.007111568 | 1 | 9 |
Module122 | 27 | 11 | GO:0006820 | biological_process | anion transport | 0.007927839 | 2 | 186 |
Module122 | 27 | 12 | GO:0008272 | biological_process | sulfate transport | 0.008135449 | 1 | 11 |
Module122 | 27 | 13 | GO:1901682 | molecular_function | sulfur compound transmembrane transporter activity | 0.009471697 | 1 | 12 |
Module122 | 27 | 14 | GO:0072348 | biological_process | sulfur compound transport | 0.015479568 | 1 | 21 |
Module122 | 27 | 15 | GO:0003333 | biological_process | amino acid transmembrane transport | 0.019133244 | 1 | 26 |
Module122 | 27 | 16 | GO:0004175 | molecular_function | endopeptidase activity | 0.023910287 | 2 | 308 |
Module122 | 27 | 17 | GO:0015171 | molecular_function | amino acid transmembrane transporter activity | 0.024299329 | 1 | 31 |
Module122 | 27 | 18 | GO:1903825 | biological_process | organic acid transmembrane transport | 0.027128409 | 1 | 37 |
Module122 | 27 | 19 | GO:0005975 | biological_process | carbohydrate metabolic process | 0.029135759 | 3 | 954 |
Module122 | 27 | 20 | GO:0006865 | biological_process | amino acid transport | 0.031464642 | 1 | 43 |
Module122 | 27 | 21 | GO:0015103 | molecular_function | inorganic anion transmembrane transporter activity | 0.035093549 | 1 | 45 |
Module122 | 27 | 22 | GO:0030247 | molecular_function | polysaccharide binding | 0.03662655 | 1 | 47 |
Module122 | 27 | 23 | GO:0001871 | molecular_function | pattern binding | 0.03662655 | 1 | 47 |
Module122 | 27 | 24 | GO:0005215 | molecular_function | transporter activity | 0.036669884 | 3 | 959 |
Module122 | 27 | 25 | GO:0005342 | molecular_function | organic acid transmembrane transporter activity | 0.040449223 | 1 | 52 |
Module122 | 27 | 26 | GO:0046943 | molecular_function | carboxylic acid transmembrane transporter activity | 0.040449223 | 1 | 52 |
Module122 | 27 | 27 | GO:0005576 | cellular_component | extracellular region | 0.043613086 | 2 | 523 |
Module122 | 27 | 28 | GO:0015698 | biological_process | inorganic anion transport | 0.043656338 | 1 | 60 |
Module122 | 27 | 29 | GO:0098656 | biological_process | anion transmembrane transport | 0.044369176 | 1 | 61 |
Gene A | Gene B | Partial correlation coefficient |
---|---|---|
GRMZM2G001247 | GRMZM2G000221 | 0.0412 |
GRMZM2G001247 | GRMZM2G071771 | 0.0379 |
GRMZM2G001247 | GRMZM2G450044 | 0.048 |
GRMZM2G000221 | GRMZM2G026804 | 0.0418 |
GRMZM2G000221 | GRMZM2G061929 | 0.0476 |
GRMZM2G000221 | GRMZM2G071771 | 0.2169 |
GRMZM2G000221 | GRMZM2G072383 | 0.044 |
GRMZM2G000221 | GRMZM2G078024 | 0.0468 |
GRMZM2G000221 | GRMZM2G089574 | 0.0496 |
GRMZM2G000221 | GRMZM2G166940 | 0.0364 |
GRMZM2G000221 | GRMZM2G170388 | 0.0449 |
GRMZM2G000221 | GRMZM2G431039 | 0.042 |
GRMZM2G000836 | GRMZM2G036365 | 0.0406 |
GRMZM2G000836 | GRMZM2G158013 | 0.0409 |
GRMZM2G016462 | GRMZM2G061929 | 0.0393 |
GRMZM2G016462 | GRMZM2G089574 | 0.0457 |
GRMZM2G026804 | GRMZM2G031167 | 0.0511 |
GRMZM2G026804 | GRMZM2G036365 | 0.0385 |
GRMZM2G026804 | GRMZM2G071771 | 0.0954 |
GRMZM2G026804 | GRMZM2G072383 | 0.0476 |
GRMZM2G026804 | GRMZM2G089574 | 0.0465 |
GRMZM2G026804 | GRMZM2G112039 | 0.0467 |
GRMZM2G026804 | GRMZM2G141036 | 0.0388 |
GRMZM2G026804 | GRMZM2G152079 | 0.0497 |
GRMZM2G026804 | GRMZM2G158013 | 0.0618 |
GRMZM2G026804 | GRMZM2G170388 | 0.1341 |
GRMZM2G026804 | GRMZM2G410352 | 0.0419 |
GRMZM2G031167 | GRMZM2G071771 | 0.0427 |
GRMZM2G031167 | GRMZM2G141036 | 0.0557 |
GRMZM2G031167 | GRMZM2G180160 | 0.0523 |
GRMZM2G031167 | GRMZM2G313058 | 0.0451 |
GRMZM2G030216 | GRMZM2G072383 | 0.0391 |
GRMZM2G030216 | GRMZM2G089574 | 0.042 |
GRMZM2G036365 | GRMZM2G072383 | 0.0424 |
GRMZM2G036365 | GRMZM2G089574 | 0.043 |
GRMZM2G036365 | GRMZM2G093490 | 0.0497 |
GRMZM2G036365 | GRMZM2G141036 | 0.0625 |
GRMZM2G036365 | GRMZM2G166940 | 0.0724 |
GRMZM2G036365 | GRMZM2G170388 | 0.0465 |
GRMZM2G036365 | GRMZM2G180160 | 0.0537 |
GRMZM2G036365 | GRMZM2G431039 | 0.0786 |
GRMZM2G036365 | GRMZM2G450044 | 0.0369 |
GRMZM2G049990 | GRMZM2G093490 | 0.0419 |
GRMZM2G049990 | GRMZM2G166940 | 0.0596 |
GRMZM2G049990 | GRMZM2G450044 | 0.0479 |
GRMZM2G061929 | GRMZM2G071771 | 0.0446 |
GRMZM2G061929 | GRMZM2G072383 | 0.1234 |
GRMZM2G061929 | GRMZM2G089574 | 0.1402 |
GRMZM2G061929 | GRMZM2G180160 | 0.0477 |
GRMZM2G071771 | GRMZM2G072383 | 0.047 |
GRMZM2G071771 | GRMZM2G089574 | 0.0546 |
GRMZM2G071771 | GRMZM2G141036 | 0.0446 |
GRMZM2G071771 | GRMZM2G152079 | 0.0508 |
GRMZM2G071771 | GRMZM2G166940 | 0.0453 |
GRMZM2G071771 | GRMZM2G170388 | 0.0703 |
GRMZM2G071771 | GRMZM2G180160 | 0.0459 |
GRMZM2G071771 | GRMZM2G431039 | 0.0554 |
GRMZM2G071771 | GRMZM2G450044 | 0.041 |
GRMZM2G072383 | GRMZM2G089574 | 0.1887 |
GRMZM2G072383 | GRMZM2G141036 | 0.049 |
GRMZM2G072383 | GRMZM2G152079 | 0.044 |
GRMZM2G072383 | GRMZM2G170388 | 0.0485 |
GRMZM2G089574 | GRMZM2G152079 | 0.0431 |
GRMZM2G089574 | GRMZM2G170388 | 0.0454 |
GRMZM2G089574 | GRMZM2G180160 | 0.0381 |
GRMZM2G093490 | GRMZM2G166940 | 0.0354 |
GRMZM2G093490 | GRMZM2G450044 | 0.0571 |
GRMZM2G112039 | GRMZM2G170388 | 0.0651 |
GRMZM2G141036 | GRMZM2G166940 | 0.078 |
GRMZM2G141036 | GRMZM2G431039 | 0.0567 |
GRMZM2G152079 | GRMZM2G180160 | 0.0365 |
GRMZM2G166940 | GRMZM2G431039 | 0.0473 |
GRMZM2G170388 | GRMZM2G410352 | 0.0396 |
GRMZM2G180160 | GRMZM2G450044 | 0.0387 |
GRMZM2G410352 | GRMZM5G801307 | 0.0399 |