This page contains information for Module151, including a list of the genes within the module, the Gene Ontology enrichement analysis results, and a heatmap showing these genes' tissue specific expression patterns. Also included is a subnetwork for the genes within the module. For this subnetwork, a SIF file (check here for details of SIF file format) is provided for downloding, which can be opened and viewed within the Cytoscape software. Alternatively, the subnetwork can be also can be opened and visualized by clicking the link provided below.
Maize Gene | Symbol | Moule No. | Arabidopsis Homologue | Arabidopsis Homologue Symbol | Arabidopsis Homologue Name | Arabidopsis Homologue Description | Arabidopsis Homologue TF_Family |
---|---|---|---|---|---|---|---|
GRMZM2G066029 | zar4 | Module151 | |||||
GRMZM2G051974 | mlo9 | Module151 | AT1G26700 | MLO14 | MILDEW RESISTANCE LOCUS O 14 | Seven transmembrane MLO family protein | |
GRMZM2G052667 | ereb102 | Module151 | AT1G53910 | RAP2.12 | related to AP2 12 | related to AP2 12 | AP2-EREBP |
GRMZM2G069649 | Module151 | AT2G25490 | EBF1 | EIN3-binding F box protein 1 | EIN3-binding F box protein 1 | ||
GRMZM2G022947 | Module151 | AT1G64900 | CYP89A2 | cytochrome P450, family 89, subfamily A, polypeptide 2 | cytochrome P450, family 89, subfamily A, polypeptide 2 | ||
GRMZM2G094017 | Module151 | AT5G01210 | AT5G01210 | HXXXD-type acyl-transferase family protein | |||
GRMZM2G102674 | Module151 | AT2G28690 | AT2G28690 | Protein of unknown function (DUF1635) | |||
GRMZM2G114873 | bhlh132 | Module151 | AT1G05805 | AT1G05805 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | bHLH | |
GRMZM2G115422 | Module151 | AT2G39980 | AT2G39980 | HXXXD-type acyl-transferase family protein | |||
GRMZM2G121208 | rtl3 | Module151 | AT2G26070 | RTE1 | REVERSION-TO-ETHYLENE SENSITIVITY1 | Protein of unknown function (DUF778) | |
GRMZM2G137546 | zar3 | Module151 | |||||
GRMZM2G137582 | ebf1 | Module151 | AT2G25490 | EBF1 | EIN3-binding F box protein 1 | EIN3-binding F box protein 1 | |
GRMZM2G148333 | ereb202 | Module151 | AT1G53910 | RAP2.12 | related to AP2 12 | related to AP2 12 | AP2-EREBP |
GRMZM2G112596 | Module151 | AT4G19540 | INDH | iron-sulfur protein required for NADH dehydrogenase | IND1(iron-sulfur protein required for NADH dehydrogenase)-like | ||
GRMZM2G165192 | Module151 | AT5G01210 | AT5G01210 | HXXXD-type acyl-transferase family protein | |||
GRMZM2G171616 | Module151 | AT2G25490 | EBF1 | EIN3-binding F box protein 1 | EIN3-binding F box protein 1 | ||
GRMZM2G171996 | Module151 | ||||||
GRMZM2G333775 | hagtf16 | Module151 | AT2G32020 | AT2G32020 | Acyl-CoA N-acyltransferases (NAT) superfamily protein | GNAT | |
GRMZM2G334574 | Module151 | AT2G28690 | AT2G28690 | Protein of unknown function (DUF1635) | |||
GRMZM2G481452 | Module151 | AT5G25350 | EBF2 | EIN3-binding F box protein 2 | EIN3-binding F box protein 2 | ||
GRMZM5G832994 | rtl1 | Module151 | AT2G26070 | RTE1 | REVERSION-TO-ETHYLENE SENSITIVITY1 | Protein of unknown function (DUF778) |
Module No. | Number of genes within the module | GO_Rank | GO ID | GO catogery | GO term | pValue | Number of genes with the GO within the module | Number of genes with the GO within the genome (background set) |
---|---|---|---|---|---|---|---|---|
Module151 | 21 | 1 | GO:0009723 | biological_process | response to ethylene | 9.24E-09 | 5 | 113 |
Module151 | 21 | 2 | GO:0019005 | cellular_component | SCF ubiquitin ligase complex | 2.90E-07 | 3 | 17 |
Module151 | 21 | 3 | GO:0010105 | biological_process | negative regulation of ethylene-activated signaling pathway | 2.97E-06 | 2 | 4 |
Module151 | 21 | 4 | GO:0070298 | biological_process | negative regulation of phosphorelay signal transduction system | 2.97E-06 | 2 | 4 |
Module151 | 21 | 5 | GO:1902532 | biological_process | negative regulation of intracellular signal transduction | 7.42E-06 | 2 | 6 |
Module151 | 21 | 6 | GO:0031461 | cellular_component | cullin-RING ubiquitin ligase complex | 8.75E-06 | 3 | 51 |
Module151 | 21 | 7 | GO:0010104 | biological_process | regulation of ethylene-activated signaling pathway | 1.04E-05 | 2 | 7 |
Module151 | 21 | 8 | GO:0070297 | biological_process | regulation of phosphorelay signal transduction system | 1.04E-05 | 2 | 7 |
Module151 | 21 | 9 | GO:0016747 | molecular_function | transferase activity, transferring acyl groups other than amino-acyl groups | 4.43E-05 | 4 | 268 |
Module151 | 21 | 10 | GO:0016746 | molecular_function | transferase activity, transferring acyl groups | 8.63E-05 | 4 | 318 |
Module151 | 21 | 11 | GO:0009873 | biological_process | ethylene-activated signaling pathway | 0.000113586 | 2 | 22 |
Module151 | 21 | 12 | GO:0000151 | cellular_component | ubiquitin ligase complex | 0.000123319 | 3 | 123 |
Module151 | 21 | 13 | GO:0009725 | biological_process | response to hormone | 0.000134512 | 5 | 790 |
Module151 | 21 | 14 | GO:1902531 | biological_process | regulation of intracellular signal transduction | 0.000159555 | 2 | 26 |
Module151 | 21 | 15 | GO:0009719 | biological_process | response to endogenous stimulus | 0.000169114 | 5 | 829 |
Module151 | 21 | 16 | GO:0071369 | biological_process | cellular response to ethylene stimulus | 0.000227834 | 2 | 31 |
Module151 | 21 | 17 | GO:0009968 | biological_process | negative regulation of signal transduction | 0.000308068 | 2 | 36 |
Module151 | 21 | 18 | GO:0010648 | biological_process | negative regulation of cell communication | 0.000325543 | 2 | 37 |
Module151 | 21 | 19 | GO:0023057 | biological_process | negative regulation of signaling | 0.000325543 | 2 | 37 |
Module151 | 21 | 20 | GO:0010033 | biological_process | response to organic substance | 0.000339715 | 5 | 961 |
Module151 | 21 | 21 | GO:1990234 | cellular_component | transferase complex | 0.000981249 | 3 | 249 |
Module151 | 21 | 22 | GO:0048585 | biological_process | negative regulation of response to stimulus | 0.001132292 | 2 | 69 |
Module151 | 21 | 23 | GO:0000160 | biological_process | phosphorelay signal transduction system | 0.001556365 | 2 | 81 |
Module151 | 21 | 24 | GO:0009966 | biological_process | regulation of signal transduction | 0.002745992 | 2 | 108 |
Module151 | 21 | 25 | GO:0023051 | biological_process | regulation of signaling | 0.002846865 | 2 | 110 |
Module151 | 21 | 26 | GO:0010646 | biological_process | regulation of cell communication | 0.003001428 | 2 | 113 |
Module151 | 21 | 27 | GO:0042221 | biological_process | response to chemical | 0.004396968 | 5 | 1681 |
Module151 | 21 | 28 | GO:0050896 | biological_process | response to stimulus | 0.004639506 | 7 | 3528 |
Module151 | 21 | 29 | GO:1902494 | cellular_component | catalytic complex | 0.004726925 | 3 | 431 |
Module151 | 21 | 30 | GO:0048583 | biological_process | regulation of response to stimulus | 0.012425677 | 2 | 235 |
Module151 | 21 | 31 | GO:0035556 | biological_process | intracellular signal transduction | 0.013142071 | 2 | 242 |
Module151 | 21 | 32 | GO:0048523 | biological_process | negative regulation of cellular process | 0.013559511 | 2 | 246 |
Module151 | 21 | 33 | GO:0009755 | biological_process | hormone-mediated signaling pathway | 0.018529509 | 2 | 290 |
Module151 | 21 | 34 | GO:0032870 | biological_process | cellular response to hormone stimulus | 0.021781572 | 2 | 316 |
Module151 | 21 | 35 | GO:0071495 | biological_process | cellular response to endogenous stimulus | 0.022432914 | 2 | 321 |
Module151 | 21 | 36 | GO:0071310 | biological_process | cellular response to organic substance | 0.031175743 | 2 | 383 |
Module151 | 21 | 37 | GO:0008080 | molecular_function | N-acetyltransferase activity | 0.03968581 | 1 | 51 |
Module151 | 21 | 38 | GO:0048519 | biological_process | negative regulation of biological process | 0.041755422 | 2 | 449 |
Module151 | 21 | 39 | GO:0070887 | biological_process | cellular response to chemical stimulus | 0.041925201 | 2 | 450 |
Module151 | 21 | 40 | GO:0016410 | molecular_function | N-acyltransferase activity | 0.043497274 | 1 | 56 |
Module151 | 21 | 41 | GO:0016407 | molecular_function | acetyltransferase activity | 0.048809867 | 1 | 63 |
Gene A | Gene B | Partial correlation coefficient |
---|---|---|
zar4 | mlo9 | 0.0373 |
zar4 | ereb102 | 0.0397 |
zar4 | GRMZM2G094017 | 0.0356 |
zar4 | bhlh132 | 0.0556 |
zar4 | rtl3 | 0.0405 |
zar4 | zar3 | 0.0882 |
zar4 | ebf1 | 0.0691 |
zar4 | ereb202 | 0.0435 |
zar4 | GRMZM2G171996 | 0.0358 |
zar4 | GRMZM2G334574 | 0.0356 |
zar4 | rtl1 | 0.0412 |
ereb102 | ereb202 | 0.04 |
GRMZM2G069649 | GRMZM2G022947 | 0.0465 |
GRMZM2G069649 | ebf1 | 0.0587 |
GRMZM2G069649 | GRMZM2G171616 | 0.0847 |
GRMZM2G069649 | GRMZM2G481452 | 0.1245 |
GRMZM2G094017 | ebf1 | 0.0395 |
GRMZM2G102674 | GRMZM2G334574 | 0.0782 |
bhlh132 | rtl3 | 0.0413 |
bhlh132 | zar3 | 0.0596 |
bhlh132 | ebf1 | 0.0489 |
bhlh132 | GRMZM2G165192 | 0.038 |
bhlh132 | GRMZM2G171616 | 0.0396 |
bhlh132 | rtl1 | 0.0415 |
GRMZM2G115422 | ebf1 | 0.0383 |
GRMZM2G115422 | GRMZM2G165192 | 0.0568 |
rtl3 | zar3 | 0.0382 |
rtl3 | rtl1 | 0.056 |
zar3 | ebf1 | 0.0737 |
zar3 | GRMZM2G171616 | 0.0393 |
zar3 | GRMZM2G481452 | 0.0451 |
zar3 | rtl1 | 0.066 |
ebf1 | GRMZM2G171616 | 0.1297 |
ebf1 | hagtf16 | 0.0451 |
ebf1 | GRMZM2G334574 | 0.0358 |
ebf1 | GRMZM2G481452 | 0.0897 |
ebf1 | rtl1 | 0.0351 |
ereb202 | GRMZM2G112596 | 0.0391 |
GRMZM2G171616 | GRMZM2G481452 | 0.0967 |