This page contains information for Module154, including a list of the genes within the module, the Gene Ontology enrichement analysis results, and a heatmap showing these genes' tissue specific expression patterns. Also included is a subnetwork for the genes within the module. For this subnetwork, a SIF file (check here for details of SIF file format) is provided for downloding, which can be opened and viewed within the Cytoscape software. Alternatively, the subnetwork can be also can be opened and visualized by clicking the link provided below.
Maize Gene | Symbol | Moule No. | Arabidopsis Homologue | Arabidopsis Homologue Symbol | Arabidopsis Homologue Name | Arabidopsis Homologue Description | Arabidopsis Homologue TF_Family |
---|---|---|---|---|---|---|---|
AC206266.3_FG001 | Module154 | AT3G59140 | ABCC10 | ATP-binding cassette C10 | multidrug resistance-associated protein 14 | ||
GRMZM2G004653 | Module154 | AT1G22540 | AT1G22540 | Major facilitator superfamily protein | |||
GRMZM2G016241 | bz2 | Module154 | AT1G10370 | ERD9 | EARLY-RESPONSIVE TO DEHYDRATION 9 | Glutathione S-transferase family protein | |
GRMZM2G020254 | wrky33 | Module154 | AT2G37260 | TTG2 | TRANSPARENT TESTA GLABRA 2 | WRKY family transcription factor family protein | WRKY |
GRMZM2G000816 | Module154 | AT3G59340 | AT3G59340 | Eukaryotic protein of unknown function (DUF914) | |||
GRMZM2G026930 | a1 | Module154 | AT5G42800 | DFR | dihydroflavonol 4-reductase | dihydroflavonol 4-reductase | |
GRMZM2G031323 | myb105 | Module154 | AT4G21440 | MYB102 | MYB-like 102 | MYB-like 102 | MYB |
GRMZM2G062357 | Module154 | AT1G55320 | AAE18 | acyl-activating enzyme 18 | acyl-activating enzyme 18 | ||
GRMZM2G062396 | fht1 | Module154 | AT3G51240 | F3H | flavanone 3-hydroxylase | flavanone 3-hydroxylase | |
GRMZM2G062724 | Module154 | AT5G22920 | AT5G22920 | CHY-type/CTCHY-type/RING-type Zinc finger protein | |||
GRMZM2G111903 | mrpa3 | Module154 | AT3G59140 | ABCC10 | ATP-binding cassette C10 | multidrug resistance-associated protein 14 | |
GRMZM2G142870 | mrpa6 | Module154 | AT3G62700 | ABCC14 | ATP-binding cassette C14 | multidrug resistance-associated protein 10 | |
GRMZM2G163798 | Module154 | AT3G18200 | UMAMIT4 | Usually multiple acids move in and out Transporters 4 | nodulin MtN21 /EamA-like transporter family protein | ||
GRMZM2G165390 | bz1 | Module154 | AT5G17050 | UGT78D2 | UDP-glucosyl transferase 78D2 | UDP-glucosyl transferase 78D2 | |
GRMZM2G127143 | Module154 | AT4G02360 | AT4G02360 | Protein of unknown function, DUF538 | |||
GRMZM2G345717 | a2 | Module154 | AT4G22880 | LDOX | leucoanthocyanidin dioxygenase | leucoanthocyanidin dioxygenase | |
GRMZM2G387394 | Module154 | AT5G39050 | PMAT1 | phenolic glucoside malonyltransferase 1 | HXXXD-type acyl-transferase family protein | ||
GRMZM2G455306 | Module154 | AT4G30440 | GAE1 | UDP-D-glucuronate 4-epimerase 1 | UDP-D-glucuronate 4-epimerase 1 | ||
GRMZM2G701063 | pl1 | Module154 | AT5G49330 | MYB111 | myb domain protein 111 | myb domain protein 111 | MYB |
GRMZM5G822829 | r1 | Module154 | AT1G63650 | EGL3 | ENHANCER OF GLABRA 3 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | bHLH |
Module No. | Number of genes within the module | GO_Rank | GO ID | GO catogery | GO term | pValue | Number of genes with the GO within the module | Number of genes with the GO within the genome (background set) |
---|---|---|---|---|---|---|---|---|
Module154 | 20 | 1 | GO:0009718 | biological_process | anthocyanin-containing compound biosynthetic process | 5.18E-10 | 4 | 13 |
Module154 | 20 | 2 | GO:0009812 | biological_process | flavonoid metabolic process | 8.11E-10 | 5 | 47 |
Module154 | 20 | 3 | GO:0046283 | biological_process | anthocyanin-containing compound metabolic process | 9.10E-09 | 4 | 25 |
Module154 | 20 | 4 | GO:0009813 | biological_process | flavonoid biosynthetic process | 2.26E-08 | 4 | 31 |
Module154 | 20 | 5 | GO:0046148 | biological_process | pigment biosynthetic process | 1.85E-06 | 4 | 91 |
Module154 | 20 | 6 | GO:0042440 | biological_process | pigment metabolic process | 5.97E-06 | 4 | 122 |
Module154 | 20 | 7 | GO:0042626 | molecular_function | ATPase activity, coupled to transmembrane movement of substances | 0.00046385 | 3 | 150 |
Module154 | 20 | 8 | GO:0043492 | molecular_function | ATPase activity, coupled to movement of substances | 0.000472949 | 3 | 151 |
Module154 | 20 | 9 | GO:0009611 | biological_process | response to wounding | 0.000504355 | 3 | 156 |
Module154 | 20 | 10 | GO:0016820 | molecular_function | hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances | 0.000510493 | 3 | 155 |
Module154 | 20 | 11 | GO:0015399 | molecular_function | primary active transmembrane transporter activity | 0.000827663 | 3 | 183 |
Module154 | 20 | 12 | GO:0015405 | molecular_function | P-P-bond-hydrolysis-driven transmembrane transporter activity | 0.000827663 | 3 | 183 |
Module154 | 20 | 13 | GO:0016702 | molecular_function | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | 0.001300188 | 2 | 52 |
Module154 | 20 | 14 | GO:0016701 | molecular_function | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen | 0.001727113 | 2 | 60 |
Module154 | 20 | 15 | GO:0052636 | molecular_function | arabinosyltransferase activity | 0.002071654 | 1 | 2 |
Module154 | 20 | 16 | GO:0009957 | biological_process | epidermal cell fate specification | 0.003113646 | 1 | 3 |
Module154 | 20 | 17 | GO:0010023 | biological_process | proanthocyanidin biosynthetic process | 0.003113646 | 1 | 3 |
Module154 | 20 | 18 | GO:0042623 | molecular_function | ATPase activity, coupled | 0.003372858 | 3 | 299 |
Module154 | 20 | 19 | GO:0016706 | molecular_function | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 0.004353112 | 2 | 96 |
Module154 | 20 | 20 | GO:0008517 | molecular_function | folic acid transporter activity | 0.005171564 | 1 | 5 |
Module154 | 20 | 21 | GO:0051180 | biological_process | vitamin transport | 0.005184406 | 1 | 5 |
Module154 | 20 | 22 | GO:0015884 | biological_process | folic acid transport | 0.005184406 | 1 | 5 |
Module154 | 20 | 23 | GO:0022804 | molecular_function | active transmembrane transporter activity | 0.005369573 | 3 | 353 |
Module154 | 20 | 24 | GO:0051183 | molecular_function | vitamin transporter activity | 0.006202851 | 1 | 6 |
Module154 | 20 | 25 | GO:0080043 | molecular_function | quercetin 3-O-glucosyltransferase activity | 0.006202851 | 1 | 6 |
Module154 | 20 | 26 | GO:0016887 | molecular_function | ATPase activity | 0.006732042 | 3 | 383 |
Module154 | 20 | 27 | GO:0046189 | biological_process | phenol-containing compound biosynthetic process | 0.007251171 | 1 | 7 |
Module154 | 20 | 28 | GO:0009753 | biological_process | response to jasmonic acid | 0.007674218 | 2 | 129 |
Module154 | 20 | 29 | GO:0051213 | molecular_function | dioxygenase activity | 0.008553057 | 2 | 136 |
Module154 | 20 | 30 | GO:0072337 | biological_process | modified amino acid transport | 0.012400654 | 1 | 12 |
Module154 | 20 | 31 | GO:0031418 | molecular_function | L-ascorbic acid binding | 0.01339374 | 1 | 13 |
Module154 | 20 | 32 | GO:0033764 | molecular_function | steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | 0.01339374 | 1 | 13 |
Module154 | 20 | 33 | GO:0003854 | molecular_function | 3-beta-hydroxy-delta5-steroid dehydrogenase activity | 0.01339374 | 1 | 13 |
Module154 | 20 | 34 | GO:0048029 | molecular_function | monosaccharide binding | 0.01339374 | 1 | 13 |
Module154 | 20 | 35 | GO:0009913 | biological_process | epidermal cell differentiation | 0.01342757 | 1 | 13 |
Module154 | 20 | 36 | GO:0010214 | biological_process | seed coat development | 0.01342757 | 1 | 13 |
Module154 | 20 | 37 | GO:0018958 | biological_process | phenol-containing compound metabolic process | 0.01342757 | 1 | 13 |
Module154 | 20 | 38 | GO:0030855 | biological_process | epithelial cell differentiation | 0.01342757 | 1 | 13 |
Module154 | 20 | 39 | GO:0005215 | molecular_function | transporter activity | 0.014982063 | 4 | 959 |
Module154 | 20 | 40 | GO:0016229 | molecular_function | steroid dehydrogenase activity | 0.015439267 | 1 | 15 |
Module154 | 20 | 41 | GO:0007033 | biological_process | vacuole organization | 0.015478427 | 1 | 15 |
Module154 | 20 | 42 | GO:0008544 | biological_process | epidermis development | 0.015478427 | 1 | 15 |
Module154 | 20 | 43 | GO:0051184 | molecular_function | cofactor transporter activity | 0.017480802 | 1 | 17 |
Module154 | 20 | 44 | GO:0060429 | biological_process | epithelium development | 0.018547291 | 1 | 18 |
Module154 | 20 | 45 | GO:0016857 | molecular_function | racemase and epimerase activity, acting on carbohydrates and derivatives | 0.019518353 | 1 | 19 |
Module154 | 20 | 46 | GO:0001708 | biological_process | cell fate specification | 0.01956827 | 1 | 19 |
Module154 | 20 | 47 | GO:0051181 | biological_process | cofactor transport | 0.01956827 | 1 | 19 |
Module154 | 20 | 48 | GO:0016854 | molecular_function | racemase and epimerase activity | 0.02358153 | 1 | 23 |
Module154 | 20 | 49 | GO:0006835 | biological_process | dicarboxylic acid transport | 0.023642333 | 1 | 23 |
Module154 | 20 | 50 | GO:0019842 | molecular_function | vitamin binding | 0.026618506 | 1 | 26 |
Module154 | 20 | 51 | GO:0045165 | biological_process | cell fate commitment | 0.026687557 | 1 | 26 |
Module154 | 20 | 52 | GO:0009850 | biological_process | auxin metabolic process | 0.032751565 | 1 | 32 |
Module154 | 20 | 53 | GO:0001101 | biological_process | response to acid chemical | 0.03380876 | 3 | 706 |
Module154 | 20 | 54 | GO:0044711 | biological_process | single-organism biosynthetic process | 0.034093683 | 4 | 1244 |
Module154 | 20 | 55 | GO:0006694 | biological_process | steroid biosynthetic process | 0.035770396 | 1 | 35 |
Module154 | 20 | 56 | GO:0004364 | molecular_function | glutathione transferase activity | 0.037678197 | 1 | 37 |
Module154 | 20 | 57 | GO:0022857 | molecular_function | transmembrane transporter activity | 0.04051017 | 3 | 753 |
Module154 | 20 | 58 | GO:0055085 | biological_process | transmembrane transport | 0.041621581 | 3 | 766 |
Module154 | 20 | 59 | GO:0017111 | molecular_function | nucleoside-triphosphatase activity | 0.042990417 | 3 | 771 |
Module154 | 20 | 60 | GO:0042886 | biological_process | amide transport | 0.043777893 | 1 | 43 |
Module154 | 20 | 61 | GO:0006865 | biological_process | amino acid transport | 0.043777893 | 1 | 43 |
Module154 | 20 | 62 | GO:0008202 | biological_process | steroid metabolic process | 0.044774476 | 1 | 44 |
Module154 | 20 | 63 | GO:0016763 | molecular_function | transferase activity, transferring pentosyl groups | 0.046638953 | 1 | 46 |
Module154 | 20 | 64 | GO:0003682 | molecular_function | chromatin binding | 0.04821422 | 2 | 343 |
Module154 | 20 | 65 | GO:0016462 | molecular_function | pyrophosphatase activity | 0.049527489 | 3 | 816 |
Gene A | Gene B | Partial correlation coefficient |
---|---|---|
AC206266.3_FG001 | mrpa3 | 0.0572 |
GRMZM2G004653 | bz2 | 0.1269 |
GRMZM2G004653 | wrky33 | 0.1006 |
GRMZM2G004653 | a1 | 0.1342 |
GRMZM2G004653 | fht1 | 0.1153 |
GRMZM2G004653 | bz1 | 0.1105 |
GRMZM2G004653 | a2 | 0.208 |
GRMZM2G004653 | GRMZM2G387394 | 0.1882 |
GRMZM2G004653 | pl1 | 0.0545 |
bz2 | wrky33 | 0.0999 |
bz2 | a1 | 0.1248 |
bz2 | myb105 | 0.0398 |
bz2 | fht1 | 0.0971 |
bz2 | bz1 | 0.1361 |
bz2 | a2 | 0.2022 |
bz2 | GRMZM2G387394 | 0.2225 |
bz2 | r1 | 0.0436 |
wrky33 | GRMZM2G000816 | 0.0638 |
wrky33 | a1 | 0.1095 |
wrky33 | GRMZM2G062357 | 0.0403 |
wrky33 | fht1 | 0.1232 |
wrky33 | bz1 | 0.0921 |
wrky33 | a2 | 0.1503 |
wrky33 | GRMZM2G387394 | 0.1361 |
GRMZM2G000816 | a1 | 0.0576 |
GRMZM2G000816 | bz1 | 0.0516 |
GRMZM2G000816 | a2 | 0.0878 |
GRMZM2G000816 | GRMZM2G387394 | 0.0833 |
a1 | fht1 | 0.1153 |
a1 | bz1 | 0.0882 |
a1 | a2 | 0.1726 |
a1 | GRMZM2G387394 | 0.1632 |
myb105 | a2 | 0.0469 |
GRMZM2G062357 | a2 | 0.0416 |
fht1 | GRMZM2G062724 | 0.0487 |
fht1 | bz1 | 0.0673 |
fht1 | a2 | 0.163 |
fht1 | GRMZM2G387394 | 0.1339 |
fht1 | r1 | 0.0612 |
mrpa3 | mrpa6 | 0.0352 |
mrpa3 | a2 | 0.0749 |
mrpa3 | GRMZM2G387394 | 0.0735 |
GRMZM2G163798 | pl1 | 0.0434 |
bz1 | a2 | 0.1232 |
bz1 | GRMZM2G387394 | 0.1311 |
GRMZM2G127143 | r1 | 0.0424 |
a2 | GRMZM2G387394 | 0.2902 |
a2 | GRMZM2G455306 | 0.0383 |
a2 | pl1 | 0.044 |
a2 | r1 | 0.0582 |
GRMZM2G387394 | GRMZM2G455306 | 0.0505 |
GRMZM2G387394 | r1 | 0.0583 |