This page contains information for Module158, including a list of the genes within the module, the Gene Ontology enrichement analysis results, and a heatmap showing these genes' tissue specific expression patterns. Also included is a subnetwork for the genes within the module. For this subnetwork, a SIF file (check here for details of SIF file format) is provided for downloding, which can be opened and viewed within the Cytoscape software. Alternatively, the subnetwork can be also can be opened and visualized by clicking the link provided below.
Maize Gene | Symbol | Moule No. | Arabidopsis Homologue | Arabidopsis Homologue Symbol | Arabidopsis Homologue Name | Arabidopsis Homologue Description | Arabidopsis Homologue TF_Family |
---|---|---|---|---|---|---|---|
GRMZM2G039880 | Module158 | AT5G52900 | MAKR6 | MEMBRANE-ASSOCIATED KINASE REGULATOR 6 | |||
GRMZM2G015049 | Module158 | AT1G75580 | AT1G75580 | SAUR-like auxin-responsive protein family | |||
GRMZM2G042429 | Module158 | AT1G29450 | AT1G29450 | SAUR-like auxin-responsive protein family | |||
GRMZM2G012636 | Module158 | AT1G29450 | AT1G29450 | SAUR-like auxin-responsive protein family | |||
GRMZM2G042765 | Module158 | AT1G29420 | AT1G29420 | SAUR-like auxin-responsive protein family | |||
GRMZM2G054509 | Module158 | AT5G07000 | ST2B | sulfotransferase 2B | sulfotransferase 2B | ||
GRMZM2G075837 | Module158 | AT5G42680 | AT5G42680 | Protein of unknown function, DUF617 | |||
GRMZM2G105419 | Module158 | AT1G29450 | AT1G29450 | SAUR-like auxin-responsive protein family | |||
GRMZM2G142357 | Module158 | AT3G26010 | AT3G26010 | Galactose oxidase/kelch repeat superfamily protein | |||
GRMZM2G144421 | Module158 | AT1G75580 | AT1G75580 | SAUR-like auxin-responsive protein family | |||
GRMZM2G151656 | Module158 | AT1G29450 | AT1G29450 | SAUR-like auxin-responsive protein family | |||
GRMZM2G156392 | Module158 | AT1G29450 | AT1G29450 | SAUR-like auxin-responsive protein family | |||
GRMZM2G071157 | Module158 | AT4G00460 | ROPGEF3 | ROP (rho of plants) guanine nucleotide exchange factor 3 | RHO guanyl-nucleotide exchange factor 3 | ||
GRMZM2G156451 | Module158 | AT1G29450 | AT1G29450 | SAUR-like auxin-responsive protein family | |||
GRMZM2G156470 | Module158 | AT1G29450 | AT1G29450 | SAUR-like auxin-responsive protein family | |||
GRMZM2G343360 | Module158 | AT1G29450 | AT1G29450 | SAUR-like auxin-responsive protein family | |||
GRMZM2G343365 | Module158 | AT1G29450 | AT1G29450 | SAUR-like auxin-responsive protein family | |||
GRMZM5G835903 | Module158 | AT1G29460 | AT1G29460 | SAUR-like auxin-responsive protein family | |||
GRMZM5G878346 | Module158 | ||||||
GRMZM5G883417 | sacd8 | Module158 | AT3G02620 | AT3G02620 | Plant stearoyl-acyl-carrier-protein desaturase family protein |
Module No. | Number of genes within the module | GO_Rank | GO ID | GO catogery | GO term | pValue | Number of genes with the GO within the module | Number of genes with the GO within the genome (background set) |
---|---|---|---|---|---|---|---|---|
Module158 | 20 | 1 | GO:0005516 | molecular_function | calmodulin binding | 3.34E-12 | 6 | 85 |
Module158 | 20 | 2 | GO:0009734 | biological_process | auxin-activated signaling pathway | 1.04E-11 | 6 | 117 |
Module158 | 20 | 3 | GO:0071365 | biological_process | cellular response to auxin stimulus | 1.34E-11 | 6 | 122 |
Module158 | 20 | 4 | GO:0009733 | biological_process | response to auxin | 6.14E-10 | 6 | 229 |
Module158 | 20 | 5 | GO:0009755 | biological_process | hormone-mediated signaling pathway | 2.55E-09 | 6 | 290 |
Module158 | 20 | 6 | GO:0032870 | biological_process | cellular response to hormone stimulus | 4.27E-09 | 6 | 316 |
Module158 | 20 | 7 | GO:0071495 | biological_process | cellular response to endogenous stimulus | 4.69E-09 | 6 | 321 |
Module158 | 20 | 8 | GO:0071310 | biological_process | cellular response to organic substance | 1.35E-08 | 6 | 383 |
Module158 | 20 | 9 | GO:0070887 | biological_process | cellular response to chemical stimulus | 3.55E-08 | 6 | 450 |
Module158 | 20 | 10 | GO:0007165 | biological_process | signal transduction | 4.80E-07 | 6 | 697 |
Module158 | 20 | 11 | GO:0023052 | biological_process | signaling | 5.18E-07 | 6 | 706 |
Module158 | 20 | 12 | GO:0044700 | biological_process | single organism signaling | 5.18E-07 | 6 | 706 |
Module158 | 20 | 13 | GO:0009725 | biological_process | response to hormone | 1.01E-06 | 6 | 790 |
Module158 | 20 | 14 | GO:0009719 | biological_process | response to endogenous stimulus | 1.34E-06 | 6 | 829 |
Module158 | 20 | 15 | GO:0007154 | biological_process | cell communication | 1.70E-06 | 6 | 863 |
Module158 | 20 | 16 | GO:0010033 | biological_process | response to organic substance | 3.20E-06 | 6 | 961 |
Module158 | 20 | 17 | GO:0051716 | biological_process | cellular response to stimulus | 9.14E-06 | 6 | 1149 |
Module158 | 20 | 18 | GO:0005739 | cellular_component | mitochondrion | 1.01E-05 | 6 | 916 |
Module158 | 20 | 19 | GO:0042221 | biological_process | response to chemical | 8.36E-05 | 6 | 1681 |
Module158 | 20 | 20 | GO:0044763 | biological_process | single-organism cellular process | 0.000275844 | 8 | 4840 |
Module158 | 20 | 21 | GO:0050794 | biological_process | regulation of cellular process | 0.000611024 | 6 | 2381 |
Module158 | 20 | 22 | GO:0050789 | biological_process | regulation of biological process | 0.001375625 | 6 | 2751 |
Module158 | 20 | 23 | GO:0065007 | biological_process | biological regulation | 0.001939145 | 6 | 2926 |
Module158 | 20 | 24 | GO:0005515 | molecular_function | protein binding | 0.002954413 | 7 | 3991 |
Module158 | 20 | 25 | GO:0009531 | cellular_component | secondary cell wall | 0.005295997 | 1 | 7 |
Module158 | 20 | 26 | GO:0044699 | biological_process | single-organism process | 0.005381481 | 8 | 7015 |
Module158 | 20 | 27 | GO:0050896 | biological_process | response to stimulus | 0.00541924 | 6 | 3528 |
Module158 | 20 | 28 | GO:0008146 | molecular_function | sulfotransferase activity | 0.006081042 | 1 | 10 |
Module158 | 20 | 29 | GO:0045300 | molecular_function | acyl-[acyl-carrier-protein] desaturase activity | 0.006687312 | 1 | 11 |
Module158 | 20 | 30 | GO:0005088 | molecular_function | Ras guanyl-nucleotide exchange factor activity | 0.009109065 | 1 | 15 |
Module158 | 20 | 31 | GO:0005089 | molecular_function | Rho guanyl-nucleotide exchange factor activity | 0.009109065 | 1 | 15 |
Module158 | 20 | 32 | GO:0016782 | molecular_function | transferase activity, transferring sulfur-containing groups | 0.014538591 | 1 | 24 |
Module158 | 20 | 33 | GO:0005085 | molecular_function | guanyl-nucleotide exchange factor activity | 0.015140216 | 1 | 25 |
Module158 | 20 | 34 | GO:0016717 | molecular_function | oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | 0.016342474 | 1 | 27 |
Module158 | 20 | 35 | GO:0048767 | biological_process | root hair elongation | 0.023506728 | 1 | 40 |
Module158 | 20 | 36 | GO:0009664 | biological_process | plant-type cell wall organization | 0.031041585 | 1 | 53 |
Module158 | 20 | 37 | GO:0080147 | biological_process | root hair cell development | 0.032196267 | 1 | 55 |
Module158 | 20 | 38 | GO:0048764 | biological_process | trichoblast maturation | 0.039099106 | 1 | 67 |
Module158 | 20 | 39 | GO:0048765 | biological_process | root hair cell differentiation | 0.039099106 | 1 | 67 |
Module158 | 20 | 40 | GO:0048469 | biological_process | cell maturation | 0.039672393 | 1 | 68 |
Module158 | 20 | 41 | GO:0010054 | biological_process | trichoblast differentiation | 0.040245381 | 1 | 69 |
Module158 | 20 | 42 | GO:0010053 | biological_process | root epidermal cell differentiation | 0.047667048 | 1 | 82 |
Module158 | 20 | 43 | GO:0090627 | biological_process | plant epidermal cell differentiation | 0.048804374 | 1 | 84 |
Gene A | Gene B | Partial correlation coefficient |
---|---|---|
GRMZM2G039880 | GRMZM2G015049 | 0.0382 |
GRMZM2G039880 | GRMZM2G343360 | 0.0448 |
GRMZM2G015049 | GRMZM2G151656 | 0.0456 |
GRMZM2G042429 | GRMZM2G012636 | 0.1 |
GRMZM2G042429 | GRMZM2G042765 | 0.081 |
GRMZM2G042429 | GRMZM2G075837 | 0.0487 |
GRMZM2G042429 | GRMZM2G105419 | 0.0906 |
GRMZM2G042429 | GRMZM2G144421 | 0.0359 |
GRMZM2G042429 | GRMZM2G151656 | 0.075 |
GRMZM2G042429 | GRMZM2G156392 | 0.0558 |
GRMZM2G042429 | GRMZM2G156451 | 0.0391 |
GRMZM2G042429 | GRMZM2G156470 | 0.0785 |
GRMZM2G042429 | GRMZM2G343365 | 0.0812 |
GRMZM2G042429 | GRMZM5G835903 | 0.0361 |
GRMZM2G012636 | GRMZM2G105419 | 0.0389 |
GRMZM2G012636 | GRMZM2G151656 | 0.0491 |
GRMZM2G012636 | GRMZM2G156451 | 0.0487 |
GRMZM2G012636 | GRMZM2G343365 | 0.0434 |
GRMZM2G012636 | GRMZM5G835903 | 0.0553 |
GRMZM2G012636 | GRMZM5G878346 | 0.0384 |
GRMZM2G042765 | GRMZM2G105419 | 0.0632 |
GRMZM2G042765 | GRMZM2G151656 | 0.0464 |
GRMZM2G042765 | GRMZM2G156392 | 0.0381 |
GRMZM2G042765 | GRMZM2G156451 | 0.1043 |
GRMZM2G042765 | GRMZM2G156470 | 0.0619 |
GRMZM2G042765 | GRMZM2G343360 | 0.0385 |
GRMZM2G042765 | GRMZM2G343365 | 0.0919 |
GRMZM2G054509 | GRMZM2G156470 | 0.0376 |
GRMZM2G075837 | GRMZM2G156451 | 0.0404 |
GRMZM2G075837 | GRMZM2G343365 | 0.0495 |
GRMZM2G075837 | sacd8 | 0.0507 |
GRMZM2G105419 | GRMZM2G156470 | 0.0711 |
GRMZM2G105419 | GRMZM5G835903 | 0.0847 |
GRMZM2G142357 | GRMZM2G343360 | 0.0425 |
GRMZM2G144421 | GRMZM2G343365 | 0.0474 |
GRMZM2G151656 | GRMZM2G156392 | 0.0942 |
GRMZM2G151656 | GRMZM2G156451 | 0.0903 |
GRMZM2G151656 | GRMZM2G156470 | 0.0877 |
GRMZM2G151656 | GRMZM2G343360 | 0.0358 |
GRMZM2G151656 | GRMZM2G343365 | 0.0895 |
GRMZM2G156392 | GRMZM2G071157 | 0.0378 |
GRMZM2G156392 | GRMZM2G156451 | 0.0944 |
GRMZM2G156392 | GRMZM2G156470 | 0.1124 |
GRMZM2G156392 | GRMZM2G343360 | 0.1528 |
GRMZM2G156392 | GRMZM2G343365 | 0.0922 |
GRMZM2G156451 | GRMZM2G156470 | 0.0471 |
GRMZM2G156451 | GRMZM2G343360 | 0.0867 |
GRMZM2G156451 | GRMZM2G343365 | 0.1698 |
GRMZM2G156451 | GRMZM5G835903 | 0.0568 |
GRMZM2G156451 | GRMZM5G878346 | 0.0403 |
GRMZM2G156451 | sacd8 | 0.0416 |
GRMZM2G156470 | GRMZM2G343365 | 0.0787 |
GRMZM2G343360 | GRMZM2G343365 | 0.0623 |
GRMZM2G343360 | GRMZM5G835903 | 0.0387 |
GRMZM2G343365 | GRMZM5G835903 | 0.0601 |
GRMZM5G835903 | GRMZM5G878346 | 0.039 |