This page contains information for Module168, including a list of the genes within the module, the Gene Ontology enrichement analysis results, and a heatmap showing these genes' tissue specific expression patterns. Also included is a subnetwork for the genes within the module. For this subnetwork, a SIF file (check here for details of SIF file format) is provided for downloding, which can be opened and viewed within the Cytoscape software. Alternatively, the subnetwork can be also can be opened and visualized by clicking the link provided below.
Maize Gene | Symbol | Moule No. | Arabidopsis Homologue | Arabidopsis Homologue Symbol | Arabidopsis Homologue Name | Arabidopsis Homologue Description | Arabidopsis Homologue TF_Family |
---|---|---|---|---|---|---|---|
GRMZM2G017013 | Module168 | AT5G52060 | BAG1 | BCL-2-associated athanogene 1 | BCL-2-associated athanogene 1 | ||
GRMZM2G001514 | Module168 | AT5G60490 | FLA12 | FASCICLIN-like arabinogalactan-protein 12 | FASCICLIN-like arabinogalactan-protein 12 | ||
GRMZM2G021794 | Module168 | AT2G20520 | FLA6 | FASCICLIN-like arabinogalactan 6 | FASCICLIN-like arabinogalactan 6 | ||
GRMZM2G027825 | Module168 | AT2G35860 | FLA16 | FASCICLIN-like arabinogalactan protein 16 precursor | FASCICLIN-like arabinogalactan protein 16 precursor | ||
GRMZM2G065718 | Module168 | AT2G45470 | FLA8 | FASCICLIN-like arabinogalactan protein 8 | FASCICLIN-like arabinogalactan protein 8 | ||
GRMZM2G075775 | Module168 | AT1G02180 | AT1G02180 | ferredoxin-related | |||
GRMZM2G079956 | Module168 | AT5G52060 | BAG1 | BCL-2-associated athanogene 1 | BCL-2-associated athanogene 1 | ||
GRMZM2G110145 | Module168 | AT5G16910 | CSLD2 | cellulose-synthase like D2 | cellulose-synthase like D2 | ||
GRMZM2G122277 | Module168 | AT5G16910 | CSLD2 | cellulose-synthase like D2 | cellulose-synthase like D2 | ||
GRMZM2G147687 | exg1 | Module168 | AT5G20950 | AT5G20950 | Glycosyl hydrolase family protein | ||
GRMZM2G157481 | Module168 | AT5G52060 | BAG1 | BCL-2-associated athanogene 1 | BCL-2-associated athanogene 1 | ||
GRMZM2G168364 | pza01714 | Module168 | AT1G05850 | POM1 | POM-POM1 | Chitinase family protein | |
GRMZM2G322618 | Module168 | AT5G19250 | AT5G19250 | Glycoprotein membrane precursor GPI-anchored | |||
GRMZM2G029879 | Module168 | AT2G44740 | CYCP4;1 | cyclin p4;1 | cyclin p4;1 | ||
GRMZM2G329181 | Module168 | AT2G35860 | FLA16 | FASCICLIN-like arabinogalactan protein 16 precursor | FASCICLIN-like arabinogalactan protein 16 precursor | ||
GRMZM2G084812 | Module168 | AT4G12730 | FLA2 | FASCICLIN-like arabinogalactan 2 | FASCICLIN-like arabinogalactan 2 | ||
GRMZM2G396540 | Module168 | AT3G15480 | AT3G15480 | Protein of unknown function (DUF1218) | |||
GRMZM2G077401 | Module168 | AT3G61750 | AT3G61750 | Cytochrome b561/ferric reductase transmembrane with DOMON related domain | |||
GRMZM5G872070 | Module168 | AT3G15480 | AT3G15480 | Protein of unknown function (DUF1218) |
Module No. | Number of genes within the module | GO_Rank | GO ID | GO catogery | GO term | pValue | Number of genes with the GO within the module | Number of genes with the GO within the genome (background set) |
---|---|---|---|---|---|---|---|---|
Module168 | 19 | 1 | GO:0051087 | molecular_function | chaperone binding | 4.14E-07 | 3 | 29 |
Module168 | 19 | 2 | GO:0030244 | biological_process | cellulose biosynthetic process | 1.21E-06 | 3 | 54 |
Module168 | 19 | 3 | GO:0030243 | biological_process | cellulose metabolic process | 1.50E-06 | 3 | 58 |
Module168 | 19 | 4 | GO:0051274 | biological_process | beta-glucan biosynthetic process | 2.54E-06 | 3 | 69 |
Module168 | 19 | 5 | GO:0051273 | biological_process | beta-glucan metabolic process | 3.01E-06 | 3 | 73 |
Module168 | 19 | 6 | GO:0009250 | biological_process | glucan biosynthetic process | 8.04E-06 | 3 | 101 |
Module168 | 19 | 7 | GO:0033692 | biological_process | cellular polysaccharide biosynthetic process | 1.68E-05 | 3 | 129 |
Module168 | 19 | 8 | GO:0000271 | biological_process | polysaccharide biosynthetic process | 1.84E-05 | 3 | 133 |
Module168 | 19 | 9 | GO:0006073 | biological_process | cellular glucan metabolic process | 4.11E-05 | 3 | 174 |
Module168 | 19 | 10 | GO:0044042 | biological_process | glucan metabolic process | 4.11E-05 | 3 | 174 |
Module168 | 19 | 11 | GO:0034637 | biological_process | cellular carbohydrate biosynthetic process | 4.18E-05 | 3 | 175 |
Module168 | 19 | 12 | GO:0044264 | biological_process | cellular polysaccharide metabolic process | 6.23E-05 | 3 | 200 |
Module168 | 19 | 13 | GO:0016051 | biological_process | carbohydrate biosynthetic process | 8.97E-05 | 3 | 226 |
Module168 | 19 | 14 | GO:0005976 | biological_process | polysaccharide metabolic process | 0.000103301 | 3 | 237 |
Module168 | 19 | 15 | GO:0016760 | molecular_function | cellulose synthase (UDP-forming) activity | 0.000123404 | 2 | 31 |
Module168 | 19 | 16 | GO:0016759 | molecular_function | cellulose synthase activity | 0.000123404 | 2 | 31 |
Module168 | 19 | 17 | GO:0044262 | biological_process | cellular carbohydrate metabolic process | 0.000249244 | 3 | 319 |
Module168 | 19 | 18 | GO:0005975 | biological_process | carbohydrate metabolic process | 0.000333523 | 4 | 954 |
Module168 | 19 | 19 | GO:0031225 | cellular_component | anchored component of membrane | 0.000871101 | 2 | 53 |
Module168 | 19 | 20 | GO:0046658 | cellular_component | anchored component of plasma membrane | 0.000871101 | 2 | 53 |
Module168 | 19 | 21 | GO:0035251 | molecular_function | UDP-glucosyltransferase activity | 0.000954908 | 2 | 86 |
Module168 | 19 | 22 | GO:0044723 | biological_process | single-organism carbohydrate metabolic process | 0.001023737 | 3 | 516 |
Module168 | 19 | 23 | GO:0046527 | molecular_function | glucosyltransferase activity | 0.001237536 | 2 | 98 |
Module168 | 19 | 24 | GO:0031226 | cellular_component | intrinsic component of plasma membrane | 0.001389044 | 2 | 67 |
Module168 | 19 | 25 | GO:0010337 | biological_process | regulation of salicylic acid metabolic process | 0.001779953 | 1 | 4 |
Module168 | 19 | 26 | GO:0009696 | biological_process | salicylic acid metabolic process | 0.003113184 | 1 | 7 |
Module168 | 19 | 27 | GO:0008194 | molecular_function | UDP-glycosyltransferase activity | 0.004053307 | 2 | 179 |
Module168 | 19 | 28 | GO:0031224 | cellular_component | intrinsic component of membrane | 0.004383823 | 5 | 1498 |
Module168 | 19 | 29 | GO:0044459 | cellular_component | plasma membrane part | 0.005046237 | 2 | 129 |
Module168 | 19 | 30 | GO:0018958 | biological_process | phenol-containing compound metabolic process | 0.005775195 | 1 | 13 |
Module168 | 19 | 31 | GO:0022622 | biological_process | root system development | 0.006063706 | 2 | 279 |
Module168 | 19 | 32 | GO:0048364 | biological_process | root development | 0.006063706 | 2 | 279 |
Module168 | 19 | 33 | GO:0043255 | biological_process | regulation of carbohydrate biosynthetic process | 0.006218288 | 1 | 14 |
Module168 | 19 | 34 | GO:0010167 | biological_process | response to nitrate | 0.006218288 | 1 | 14 |
Module168 | 19 | 35 | GO:0006026 | biological_process | aminoglycan catabolic process | 0.007103978 | 1 | 16 |
Module168 | 19 | 36 | GO:0006030 | biological_process | chitin metabolic process | 0.007103978 | 1 | 16 |
Module168 | 19 | 37 | GO:0006032 | biological_process | chitin catabolic process | 0.007103978 | 1 | 16 |
Module168 | 19 | 38 | GO:0042537 | biological_process | benzene-containing compound metabolic process | 0.007103978 | 1 | 16 |
Module168 | 19 | 39 | GO:1901072 | biological_process | glucosamine-containing compound catabolic process | 0.007103978 | 1 | 16 |
Module168 | 19 | 40 | GO:0046348 | biological_process | amino sugar catabolic process | 0.007103978 | 1 | 16 |
Module168 | 19 | 41 | GO:1901071 | biological_process | glucosamine-containing compound metabolic process | 0.007546577 | 1 | 17 |
Module168 | 19 | 42 | GO:0006022 | biological_process | aminoglycan metabolic process | 0.007989011 | 1 | 18 |
Module168 | 19 | 43 | GO:0004568 | molecular_function | chitinase activity | 0.008746301 | 1 | 16 |
Module168 | 19 | 44 | GO:0006109 | biological_process | regulation of carbohydrate metabolic process | 0.009757104 | 1 | 22 |
Module168 | 19 | 45 | GO:0006040 | biological_process | amino sugar metabolic process | 0.010640165 | 1 | 24 |
Module168 | 19 | 46 | GO:0044425 | cellular_component | membrane part | 0.012331973 | 5 | 1895 |
Module168 | 19 | 47 | GO:0009825 | biological_process | multidimensional cell growth | 0.012404319 | 1 | 28 |
Module168 | 19 | 48 | GO:0044711 | biological_process | single-organism biosynthetic process | 0.012678427 | 3 | 1244 |
Module168 | 19 | 49 | GO:0009809 | biological_process | lignin biosynthetic process | 0.012844948 | 1 | 29 |
Module168 | 19 | 50 | GO:0010565 | biological_process | regulation of cellular ketone metabolic process | 0.014605824 | 1 | 33 |
Module168 | 19 | 51 | GO:1901136 | biological_process | carbohydrate derivative catabolic process | 0.014605824 | 1 | 33 |
Module168 | 19 | 52 | GO:1904029 | biological_process | regulation of cyclin-dependent protein kinase activity | 0.015485281 | 1 | 35 |
Module168 | 19 | 53 | GO:0000079 | biological_process | regulation of cyclin-dependent protein serine/threonine kinase activity | 0.015485281 | 1 | 35 |
Module168 | 19 | 54 | GO:0016998 | biological_process | cell wall macromolecule catabolic process | 0.016364083 | 1 | 37 |
Module168 | 19 | 55 | GO:0004553 | molecular_function | hydrolase activity, hydrolyzing O-glycosyl compounds | 0.018172144 | 2 | 390 |
Module168 | 19 | 56 | GO:0009808 | biological_process | lignin metabolic process | 0.019872757 | 1 | 45 |
Module168 | 19 | 57 | GO:0099402 | biological_process | plant organ development | 0.020251339 | 2 | 522 |
Module168 | 19 | 58 | GO:0016798 | molecular_function | hydrolase activity, acting on glycosyl bonds | 0.020993187 | 2 | 421 |
Module168 | 19 | 59 | GO:0009735 | biological_process | response to cytokinin | 0.021185818 | 1 | 48 |
Module168 | 19 | 60 | GO:0071900 | biological_process | regulation of protein serine/threonine kinase activity | 0.021185818 | 1 | 48 |
Module168 | 19 | 61 | GO:0016758 | molecular_function | transferase activity, transferring hexosyl groups | 0.023297674 | 2 | 445 |
Module168 | 19 | 62 | GO:0042180 | biological_process | cellular ketone metabolic process | 0.023370996 | 1 | 53 |
Module168 | 19 | 63 | GO:0043549 | biological_process | regulation of kinase activity | 0.023807543 | 1 | 54 |
Module168 | 19 | 64 | GO:0045859 | biological_process | regulation of protein kinase activity | 0.023807543 | 1 | 54 |
Module168 | 19 | 65 | GO:0001932 | biological_process | regulation of protein phosphorylation | 0.024243927 | 1 | 55 |
Module168 | 19 | 66 | GO:0009699 | biological_process | phenylpropanoid biosynthetic process | 0.025116209 | 1 | 57 |
Module168 | 19 | 67 | GO:0030247 | molecular_function | polysaccharide binding | 0.02549898 | 1 | 47 |
Module168 | 19 | 68 | GO:0001871 | molecular_function | pattern binding | 0.02549898 | 1 | 47 |
Module168 | 19 | 69 | GO:0042325 | biological_process | regulation of phosphorylation | 0.025987841 | 1 | 59 |
Module168 | 19 | 70 | GO:0051338 | biological_process | regulation of transferase activity | 0.027294071 | 1 | 62 |
Module168 | 19 | 71 | GO:0005773 | cellular_component | vacuole | 0.029155533 | 3 | 838 |
Module168 | 19 | 72 | GO:0019901 | molecular_function | protein kinase binding | 0.030849122 | 1 | 57 |
Module168 | 19 | 73 | GO:0051174 | biological_process | regulation of phosphorus metabolic process | 0.031637632 | 1 | 72 |
Module168 | 19 | 74 | GO:0019220 | biological_process | regulation of phosphate metabolic process | 0.031637632 | 1 | 72 |
Module168 | 19 | 75 | GO:0031399 | biological_process | regulation of protein modification process | 0.031637632 | 1 | 72 |
Module168 | 19 | 76 | GO:0009698 | biological_process | phenylpropanoid metabolic process | 0.033803344 | 1 | 77 |
Module168 | 19 | 77 | GO:0010053 | biological_process | root epidermal cell differentiation | 0.035965018 | 1 | 82 |
Module168 | 19 | 78 | GO:0019900 | molecular_function | kinase binding | 0.036704108 | 1 | 68 |
Module168 | 19 | 79 | GO:0090627 | biological_process | plant epidermal cell differentiation | 0.036828558 | 1 | 84 |
Module168 | 19 | 80 | GO:0044550 | biological_process | secondary metabolite biosynthetic process | 0.036828558 | 1 | 84 |
Module168 | 19 | 81 | GO:0016757 | molecular_function | transferase activity, transferring glycosyl groups | 0.037738339 | 2 | 577 |
Module168 | 19 | 82 | GO:0044036 | biological_process | cell wall macromolecule metabolic process | 0.038553706 | 1 | 88 |
Module168 | 19 | 83 | GO:0051726 | biological_process | regulation of cell cycle | 0.044571457 | 1 | 102 |
Module168 | 19 | 84 | GO:0016020 | cellular_component | membrane | 0.047761343 | 7 | 4716 |
Module168 | 19 | 85 | GO:1901565 | biological_process | organonitrogen compound catabolic process | 0.049277641 | 1 | 113 |
Gene A | Gene B | Partial correlation coefficient |
---|---|---|
GRMZM2G017013 | GRMZM2G001514 | 0.0364 |
GRMZM2G017013 | GRMZM2G021794 | 0.0354 |
GRMZM2G017013 | GRMZM2G027825 | 0.0413 |
GRMZM2G017013 | GRMZM2G079956 | 0.0397 |
GRMZM2G017013 | GRMZM2G110145 | 0.0378 |
GRMZM2G017013 | GRMZM2G122277 | 0.044 |
GRMZM2G017013 | GRMZM2G329181 | 0.0393 |
GRMZM2G017013 | GRMZM2G396540 | 0.0379 |
GRMZM2G001514 | GRMZM2G021794 | 0.0567 |
GRMZM2G001514 | GRMZM2G065718 | 0.051 |
GRMZM2G001514 | GRMZM2G075775 | 0.0374 |
GRMZM2G001514 | GRMZM2G079956 | 0.0354 |
GRMZM2G001514 | GRMZM2G110145 | 0.0449 |
GRMZM2G001514 | GRMZM2G122277 | 0.0443 |
GRMZM2G001514 | pza01714 | 0.0487 |
GRMZM2G001514 | GRMZM2G329181 | 0.0367 |
GRMZM2G001514 | GRMZM2G396540 | 0.0391 |
GRMZM2G001514 | GRMZM5G872070 | 0.05 |
GRMZM2G021794 | GRMZM2G075775 | 0.0454 |
GRMZM2G021794 | GRMZM2G157481 | 0.0361 |
GRMZM2G021794 | pza01714 | 0.0403 |
GRMZM2G021794 | GRMZM2G329181 | 0.0392 |
GRMZM2G021794 | GRMZM2G396540 | 0.0414 |
GRMZM2G021794 | GRMZM5G872070 | 0.0451 |
GRMZM2G027825 | GRMZM2G065718 | 0.0367 |
GRMZM2G027825 | GRMZM2G110145 | 0.0412 |
GRMZM2G027825 | GRMZM2G122277 | 0.0381 |
GRMZM2G027825 | GRMZM2G329181 | 0.0661 |
GRMZM2G075775 | exg1 | 0.0441 |
GRMZM2G075775 | GRMZM2G157481 | 0.0402 |
GRMZM2G075775 | pza01714 | 0.0372 |
GRMZM2G075775 | GRMZM2G322618 | 0.0403 |
GRMZM2G075775 | GRMZM2G329181 | 0.0364 |
GRMZM2G075775 | GRMZM5G872070 | 0.0458 |
GRMZM2G079956 | GRMZM2G110145 | 0.0366 |
GRMZM2G079956 | GRMZM2G122277 | 0.0356 |
GRMZM2G079956 | GRMZM2G329181 | 0.0401 |
GRMZM2G079956 | GRMZM5G872070 | 0.0383 |
GRMZM2G110145 | GRMZM2G122277 | 0.0724 |
GRMZM2G110145 | GRMZM2G329181 | 0.04 |
GRMZM2G122277 | GRMZM2G329181 | 0.0407 |
GRMZM2G157481 | GRMZM2G322618 | 0.0415 |
GRMZM2G157481 | GRMZM5G872070 | 0.0376 |
pza01714 | GRMZM2G396540 | 0.0358 |
pza01714 | GRMZM5G872070 | 0.0485 |
GRMZM2G322618 | GRMZM2G029879 | 0.0391 |
GRMZM2G322618 | GRMZM5G872070 | 0.042 |
GRMZM2G029879 | GRMZM5G872070 | 0.0456 |
GRMZM2G329181 | GRMZM2G084812 | 0.0368 |
GRMZM2G396540 | GRMZM2G077401 | 0.035 |
GRMZM2G396540 | GRMZM5G872070 | 0.054 |