This page contains information for Module171, including a list of the genes within the module, the Gene Ontology enrichement analysis results, and a heatmap showing these genes' tissue specific expression patterns. Also included is a subnetwork for the genes within the module. For this subnetwork, a SIF file (check here for details of SIF file format) is provided for downloding, which can be opened and viewed within the Cytoscape software. Alternatively, the subnetwork can be also can be opened and visualized by clicking the link provided below.
Maize Gene | Symbol | Moule No. | Arabidopsis Homologue | Arabidopsis Homologue Symbol | Arabidopsis Homologue Name | Arabidopsis Homologue Description | Arabidopsis Homologue TF_Family |
---|---|---|---|---|---|---|---|
GRMZM2G052796 | Module171 | AT5G18600 | AT5G18600 | Thioredoxin superfamily protein | |||
GRMZM2G035517 | Module171 | AT4G30610 | BRS1 | BRI1 SUPPRESSOR 1 | alpha/beta-Hydrolases superfamily protein | ||
GRMZM2G089106 | Module171 | AT4G20380 | LSD1 | LESION SIMULATING DISEASE | LSD1 zinc finger family protein | ||
GRMZM2G110286 | Module171 | AT3G21460 | AT3G21460 | Glutaredoxin family protein | |||
GRMZM2G109812 | Module171 | ||||||
GRMZM2G158384 | Module171 | ||||||
GRMZM2G160136 | bzip42 | Module171 | AT4G01120 | GBF2 | G-box binding factor 2 | G-box binding factor 2 | bZIP |
GRMZM2G316030 | Module171 | AT4G15550 | IAGLU | indole-3-acetate beta-D-glucosyltransferase | indole-3-acetate beta-D-glucosyltransferase | ||
GRMZM2G337706 | Module171 | AT2G47870 | AT2G47870 | Thioredoxin superfamily protein | |||
GRMZM2G371063 | Module171 | AT3G02000 | ROXY1 | Thioredoxin superfamily protein | |||
GRMZM2G400167 | pebp26 | Module171 | AT4G20370 | TSF | TWIN SISTER OF FT | PEBP (phosphatidylethanolamine-binding protein) family protein | |
GRMZM2G413315 | Module171 | AT3G21460 | AT3G21460 | Glutaredoxin family protein | |||
GRMZM2G428027 | Module171 | AT1G77760 | NIA1 | nitrate reductase 1 | nitrate reductase 1 | ||
GRMZM2G474258 | Module171 | AT2G33350 | AT2G33350 | CCT motif family protein | Orphans | ||
GRMZM5G854880 | Module171 | AT2G02220 | PSKR1 | phytosulfokin receptor 1 | phytosulfokin receptor 1 | ||
GRMZM5G860607 | Module171 | AT5G18600 | AT5G18600 | Thioredoxin superfamily protein | |||
GRMZM5G892308 | Module171 | AT5G18600 | AT5G18600 | Thioredoxin superfamily protein | |||
GRMZM6G706391 | Module171 | AT3G63470 | scpl40 | serine carboxypeptidase-like 40 | serine carboxypeptidase-like 40 | ||
zma-MIR169i | Module171 |
Module No. | Number of genes within the module | GO_Rank | GO ID | GO catogery | GO term | pValue | Number of genes with the GO within the module | Number of genes with the GO within the genome (background set) |
---|---|---|---|---|---|---|---|---|
Module171 | 19 | 1 | GO:0015035 | molecular_function | protein disulfide oxidoreductase activity | 2.01E-12 | 7 | 113 |
Module171 | 19 | 2 | GO:0015036 | molecular_function | disulfide oxidoreductase activity | 2.43E-12 | 7 | 116 |
Module171 | 19 | 3 | GO:0016667 | molecular_function | oxidoreductase activity, acting on a sulfur group of donors | 1.13E-11 | 7 | 144 |
Module171 | 19 | 4 | GO:0045454 | biological_process | cell redox homeostasis | 7.80E-11 | 7 | 156 |
Module171 | 19 | 5 | GO:0019725 | biological_process | cellular homeostasis | 8.21E-10 | 7 | 218 |
Module171 | 19 | 6 | GO:0009055 | molecular_function | electron carrier activity | 1.77E-09 | 8 | 499 |
Module171 | 19 | 7 | GO:0042592 | biological_process | homeostatic process | 6.29E-09 | 7 | 292 |
Module171 | 19 | 8 | GO:0065008 | biological_process | regulation of biological quality | 2.12E-07 | 7 | 487 |
Module171 | 19 | 9 | GO:0016491 | molecular_function | oxidoreductase activity | 1.33E-05 | 8 | 1587 |
Module171 | 19 | 10 | GO:0050794 | biological_process | regulation of cellular process | 0.000140475 | 9 | 2381 |
Module171 | 19 | 11 | GO:0050789 | biological_process | regulation of biological process | 0.000445624 | 9 | 2751 |
Module171 | 19 | 12 | GO:0004185 | molecular_function | serine-type carboxypeptidase activity | 0.000715308 | 2 | 47 |
Module171 | 19 | 13 | GO:0065007 | biological_process | biological regulation | 0.000723471 | 9 | 2926 |
Module171 | 19 | 14 | GO:0070008 | molecular_function | serine-type exopeptidase activity | 0.000809409 | 2 | 50 |
Module171 | 19 | 15 | GO:0004180 | molecular_function | carboxypeptidase activity | 0.000978813 | 2 | 55 |
Module171 | 19 | 16 | GO:0010618 | biological_process | aerenchyma formation | 0.002076766 | 1 | 2 |
Module171 | 19 | 17 | GO:0010602 | biological_process | regulation of 1-aminocyclopropane-1-carboxylate metabolic process | 0.002076766 | 1 | 2 |
Module171 | 19 | 18 | GO:0002240 | biological_process | response to molecule of oomycetes origin | 0.002076766 | 1 | 2 |
Module171 | 19 | 19 | GO:0018871 | biological_process | 1-aminocyclopropane-1-carboxylate metabolic process | 0.002076766 | 1 | 2 |
Module171 | 19 | 20 | GO:0008238 | molecular_function | exopeptidase activity | 0.002212631 | 2 | 83 |
Module171 | 19 | 21 | GO:0046857 | molecular_function | oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor | 0.003409745 | 1 | 4 |
Module171 | 19 | 22 | GO:0010310 | biological_process | regulation of hydrogen peroxide metabolic process | 0.004149526 | 1 | 4 |
Module171 | 19 | 23 | GO:0043546 | molecular_function | molybdopterin cofactor binding | 0.004260493 | 1 | 5 |
Module171 | 19 | 24 | GO:0016661 | molecular_function | oxidoreductase activity, acting on other nitrogenous compounds as donors | 0.005110566 | 1 | 6 |
Module171 | 19 | 25 | GO:0010104 | biological_process | regulation of ethylene-activated signaling pathway | 0.007251171 | 1 | 7 |
Module171 | 19 | 26 | GO:0042126 | biological_process | nitrate metabolic process | 0.007251171 | 1 | 7 |
Module171 | 19 | 27 | GO:0042128 | biological_process | nitrate assimilation | 0.007251171 | 1 | 7 |
Module171 | 19 | 28 | GO:0070297 | biological_process | regulation of phosphorelay signal transduction system | 0.007251171 | 1 | 7 |
Module171 | 19 | 29 | GO:0071941 | biological_process | nitrogen cycle metabolic process | 0.008283058 | 1 | 8 |
Module171 | 19 | 30 | GO:2001057 | biological_process | reactive nitrogen species metabolic process | 0.008283058 | 1 | 8 |
Module171 | 19 | 31 | GO:0030151 | molecular_function | molybdenum ion binding | 0.008504125 | 1 | 10 |
Module171 | 19 | 32 | GO:0009862 | biological_process | systemic acquired resistance, salicylic acid mediated signaling pathway | 0.009313949 | 1 | 9 |
Module171 | 19 | 33 | GO:0002239 | biological_process | response to oomycetes | 0.010343845 | 1 | 10 |
Module171 | 19 | 34 | GO:0008236 | molecular_function | serine-type peptidase activity | 0.010421546 | 2 | 184 |
Module171 | 19 | 35 | GO:0017171 | molecular_function | serine hydrolase activity | 0.010421546 | 2 | 184 |
Module171 | 19 | 36 | GO:0003824 | molecular_function | catalytic activity | 0.010815405 | 12 | 8627 |
Module171 | 19 | 37 | GO:2000377 | biological_process | regulation of reactive oxygen species metabolic process | 0.012400654 | 1 | 12 |
Module171 | 19 | 38 | GO:0033238 | biological_process | regulation of cellular amine metabolic process | 0.01342757 | 1 | 13 |
Module171 | 19 | 39 | GO:0006521 | biological_process | regulation of cellular amino acid metabolic process | 0.01342757 | 1 | 13 |
Module171 | 19 | 40 | GO:0042743 | biological_process | hydrogen peroxide metabolic process | 0.022625293 | 1 | 22 |
Module171 | 19 | 41 | GO:0009873 | biological_process | ethylene-activated signaling pathway | 0.022625293 | 1 | 22 |
Module171 | 19 | 42 | GO:0009626 | biological_process | plant-type hypersensitive response | 0.024658389 | 1 | 24 |
Module171 | 19 | 43 | GO:0001666 | biological_process | response to hypoxia | 0.025673464 | 1 | 25 |
Module171 | 19 | 44 | GO:0009863 | biological_process | salicylic acid mediated signaling pathway | 0.025673464 | 1 | 25 |
Module171 | 19 | 45 | GO:1902531 | biological_process | regulation of intracellular signal transduction | 0.026687557 | 1 | 26 |
Module171 | 19 | 46 | GO:0034050 | biological_process | host programmed cell death induced by symbiont | 0.02770067 | 1 | 27 |
Module171 | 19 | 47 | GO:0036293 | biological_process | response to decreased oxygen levels | 0.028712804 | 1 | 28 |
Module171 | 19 | 48 | GO:0043067 | biological_process | regulation of programmed cell death | 0.028712804 | 1 | 28 |
Module171 | 19 | 49 | GO:0044763 | biological_process | single-organism cellular process | 0.028896314 | 9 | 4840 |
Module171 | 19 | 50 | GO:0070482 | biological_process | response to oxygen levels | 0.02972396 | 1 | 29 |
Module171 | 19 | 51 | GO:0071446 | biological_process | cellular response to salicylic acid stimulus | 0.030734138 | 1 | 30 |
Module171 | 19 | 52 | GO:0071369 | biological_process | cellular response to ethylene stimulus | 0.031743339 | 1 | 31 |
Module171 | 19 | 53 | GO:0010565 | biological_process | regulation of cellular ketone metabolic process | 0.033758816 | 1 | 33 |
Module171 | 19 | 54 | GO:0010941 | biological_process | regulation of cell death | 0.034765092 | 1 | 34 |
Module171 | 19 | 55 | GO:0009627 | biological_process | systemic acquired resistance | 0.041781828 | 1 | 41 |
Gene A | Gene B | Partial correlation coefficient |
---|---|---|
GRMZM2G052796 | GRMZM2G035517 | 0.0574 |
GRMZM2G052796 | GRMZM2G089106 | 0.0642 |
GRMZM2G052796 | GRMZM2G110286 | 0.1675 |
GRMZM2G052796 | GRMZM2G158384 | 0.039 |
GRMZM2G052796 | GRMZM2G337706 | 0.0582 |
GRMZM2G052796 | pebp26 | 0.056 |
GRMZM2G052796 | GRMZM2G413315 | 0.0938 |
GRMZM2G052796 | GRMZM2G428027 | 0.0675 |
GRMZM2G052796 | GRMZM5G854880 | 0.0469 |
GRMZM2G052796 | GRMZM5G860607 | 0.0811 |
GRMZM2G052796 | GRMZM5G892308 | 0.0679 |
GRMZM2G052796 | GRMZM6G706391 | 0.1063 |
GRMZM2G052796 | zma-MIR169i | 0.0503 |
GRMZM2G035517 | GRMZM2G089106 | 0.0384 |
GRMZM2G035517 | GRMZM2G110286 | 0.0419 |
GRMZM2G035517 | GRMZM6G706391 | 0.1137 |
GRMZM2G089106 | GRMZM2G110286 | 0.0585 |
GRMZM2G089106 | pebp26 | 0.0359 |
GRMZM2G089106 | GRMZM5G860607 | 0.0555 |
GRMZM2G110286 | GRMZM2G316030 | 0.0517 |
GRMZM2G110286 | GRMZM2G337706 | 0.0478 |
GRMZM2G110286 | GRMZM2G371063 | 0.0675 |
GRMZM2G110286 | pebp26 | 0.0627 |
GRMZM2G110286 | GRMZM2G413315 | 0.0586 |
GRMZM2G110286 | GRMZM2G428027 | 0.038 |
GRMZM2G110286 | GRMZM5G860607 | 0.0844 |
GRMZM2G110286 | GRMZM5G892308 | 0.0946 |
GRMZM2G110286 | GRMZM6G706391 | 0.0556 |
GRMZM2G110286 | zma-MIR169i | 0.0446 |
GRMZM2G109812 | bzip42 | 0.0506 |
GRMZM2G158384 | GRMZM5G854880 | 0.0398 |
bzip42 | GRMZM2G474258 | 0.0357 |
GRMZM2G316030 | GRMZM2G337706 | 0.0507 |
GRMZM2G316030 | GRMZM5G892308 | 0.0519 |
GRMZM2G337706 | GRMZM2G371063 | 0.036 |
GRMZM2G337706 | GRMZM2G413315 | 0.0399 |
GRMZM2G337706 | GRMZM2G428027 | 0.0465 |
GRMZM2G337706 | GRMZM5G860607 | 0.0721 |
GRMZM2G337706 | GRMZM5G892308 | 0.1186 |
GRMZM2G371063 | GRMZM5G860607 | 0.0664 |
GRMZM2G371063 | GRMZM5G892308 | 0.0787 |
pebp26 | GRMZM2G413315 | 0.058 |
pebp26 | GRMZM2G428027 | 0.0424 |
pebp26 | zma-MIR169i | 0.0479 |
GRMZM2G413315 | GRMZM2G428027 | 0.0787 |
GRMZM2G413315 | GRMZM2G474258 | 0.0362 |
GRMZM2G413315 | GRMZM5G860607 | 0.085 |
GRMZM2G428027 | GRMZM5G860607 | 0.0476 |
GRMZM5G854880 | GRMZM6G706391 | 0.0399 |
GRMZM5G860607 | GRMZM5G892308 | 0.0637 |
GRMZM5G860607 | zma-MIR169i | 0.0443 |