This page contains information for Module202, including a list of the genes within the module, the Gene Ontology enrichement analysis results, and a heatmap showing these genes' tissue specific expression patterns. Also included is a subnetwork for the genes within the module. For this subnetwork, a SIF file (check here for details of SIF file format) is provided for downloding, which can be opened and viewed within the Cytoscape software. Alternatively, the subnetwork can be also can be opened and visualized by clicking the link provided below.
Maize Gene | Symbol | Moule No. | Arabidopsis Homologue | Arabidopsis Homologue Symbol | Arabidopsis Homologue Name | Arabidopsis Homologue Description | Arabidopsis Homologue TF_Family |
---|---|---|---|---|---|---|---|
GRMZM2G025742 | pin5 | Module202 | AT5G16530 | PIN5 | PIN-FORMED 5 | Auxin efflux carrier family protein | |
GRMZM2G031441 | Module202 | AT4G39250 | RL1 | RAD-like 1 | RAD-like 1 | MYB-related | |
GRMZM2G064657 | phos4 | Module202 | AT1G68740 | PHO1;H1 | EXS (ERD1/XPR1/SYG1) family protein | ||
GRMZM2G081666 | kch3 | Module202 | AT5G46240 | KAT1 | potassium channel in Arabidopsis thaliana 1 | potassium channel in Arabidopsis thaliana 1 | |
GRMZM2G158809 | pebp18 | Module202 | AT1G65480 | FT | FLOWERING LOCUS T | PEBP (phosphatidylethanolamine-binding protein) family protein | |
GRMZM2G168502 | Module202 | AT4G08290 | UMAMIT20 | Usually multiple acids move in and out Transporters 20 | nodulin MtN21 /EamA-like transporter family protein | ||
GRMZM2G007249 | acco2 | Module202 | AT1G05010 | EFE | ethylene-forming enzyme | ethylene-forming enzyme | |
GRMZM2G384661 | Module202 | AT5G16330 | AT5G16330 | NC domain-containing protein-related | |||
GRMZM2G400806 | Module202 | AT3G06483 | PDK | pyruvate dehydrogenase kinase | pyruvate dehydrogenase kinase | ||
GRMZM2G409976 | Module202 | AT2G17220 | Kin3 | kinase 3 | Protein kinase superfamily protein | ||
GRMZM2G440005 | pebp24 | Module202 | AT1G65480 | FT | FLOWERING LOCUS T | PEBP (phosphatidylethanolamine-binding protein) family protein | |
GRMZM2G450273 | Module202 | AT5G24860 | FPF1 | FLOWERING PROMOTING FACTOR 1 | flowering promoting factor 1 | ||
GRMZM2G478160 | Module202 | AT2G44310 | AT2G44310 | Calcium-binding EF-hand family protein | |||
GRMZM5G820822 | Module202 | AT3G45310 | AT3G45310 | Cysteine proteinases superfamily protein | |||
GRMZM5G870170 | mate1 | Module202 | AT1G51340 | AT1G51340 | MATE efflux family protein | ||
GRMZM5G891944 | phos1 | Module202 | AT1G68740 | PHO1;H1 | EXS (ERD1/XPR1/SYG1) family protein |
Module No. | Number of genes within the module | GO_Rank | GO ID | GO catogery | GO term | pValue | Number of genes with the GO within the module | Number of genes with the GO within the genome (background set) |
---|---|---|---|---|---|---|---|---|
Module202 | 16 | 1 | GO:0048582 | biological_process | positive regulation of post-embryonic development | 1.16E-05 | 3 | 57 |
Module202 | 16 | 2 | GO:0051240 | biological_process | positive regulation of multicellular organismal process | 1.49E-05 | 3 | 62 |
Module202 | 16 | 3 | GO:0051094 | biological_process | positive regulation of developmental process | 1.97E-05 | 3 | 68 |
Module202 | 16 | 4 | GO:0048878 | biological_process | chemical homeostasis | 0.000116063 | 3 | 123 |
Module202 | 16 | 5 | GO:0022891 | molecular_function | substrate-specific transmembrane transporter activity | 0.000364773 | 4 | 625 |
Module202 | 16 | 6 | GO:0009911 | biological_process | positive regulation of flower development | 0.000419078 | 2 | 38 |
Module202 | 16 | 7 | GO:0048580 | biological_process | regulation of post-embryonic development | 0.00043184 | 3 | 192 |
Module202 | 16 | 8 | GO:0005342 | molecular_function | organic acid transmembrane transporter activity | 0.000436365 | 2 | 52 |
Module202 | 16 | 9 | GO:0046943 | molecular_function | carboxylic acid transmembrane transporter activity | 0.000436365 | 2 | 52 |
Module202 | 16 | 10 | GO:0022892 | molecular_function | substrate-specific transporter activity | 0.000555705 | 4 | 698 |
Module202 | 16 | 11 | GO:2000243 | biological_process | positive regulation of reproductive process | 0.000614798 | 2 | 46 |
Module202 | 16 | 12 | GO:0048573 | biological_process | photoperiodism, flowering | 0.000669444 | 2 | 48 |
Module202 | 16 | 13 | GO:0022857 | molecular_function | transmembrane transporter activity | 0.000740776 | 4 | 753 |
Module202 | 16 | 14 | GO:0008514 | molecular_function | organic anion transmembrane transporter activity | 0.000835684 | 2 | 72 |
Module202 | 16 | 15 | GO:0009648 | biological_process | photoperiodism | 0.001079795 | 2 | 61 |
Module202 | 16 | 16 | GO:2000026 | biological_process | regulation of multicellular organismal development | 0.001091631 | 3 | 264 |
Module202 | 16 | 17 | GO:0015137 | molecular_function | citrate transmembrane transporter activity | 0.00121888 | 1 | 2 |
Module202 | 16 | 18 | GO:0051239 | biological_process | regulation of multicellular organismal process | 0.001320746 | 3 | 282 |
Module202 | 16 | 19 | GO:0042592 | biological_process | homeostatic process | 0.001460256 | 3 | 292 |
Module202 | 16 | 20 | GO:0046942 | biological_process | carboxylic acid transport | 0.001500802 | 2 | 72 |
Module202 | 16 | 21 | GO:0015849 | biological_process | organic acid transport | 0.001500802 | 2 | 72 |
Module202 | 16 | 22 | GO:0080162 | biological_process | intracellular auxin transport | 0.001631926 | 1 | 2 |
Module202 | 16 | 23 | GO:0015746 | biological_process | citrate transport | 0.001631926 | 1 | 2 |
Module202 | 16 | 24 | GO:0048518 | biological_process | positive regulation of biological process | 0.001799248 | 3 | 314 |
Module202 | 16 | 25 | GO:0050793 | biological_process | regulation of developmental process | 0.001815732 | 3 | 315 |
Module202 | 16 | 26 | GO:0015142 | molecular_function | tricarboxylic acid transmembrane transporter activity | 0.001827819 | 1 | 3 |
Module202 | 16 | 27 | GO:0005215 | molecular_function | transporter activity | 0.001834277 | 4 | 959 |
Module202 | 16 | 28 | GO:0070542 | biological_process | response to fatty acid | 0.002446981 | 1 | 3 |
Module202 | 16 | 29 | GO:0071398 | biological_process | cellular response to fatty acid | 0.002446981 | 1 | 3 |
Module202 | 16 | 30 | GO:0006842 | biological_process | tricarboxylic acid transport | 0.002446981 | 1 | 3 |
Module202 | 16 | 31 | GO:0055085 | biological_process | transmembrane transport | 0.002477666 | 4 | 766 |
Module202 | 16 | 32 | GO:0050801 | biological_process | ion homeostasis | 0.002488522 | 2 | 93 |
Module202 | 16 | 33 | GO:0008509 | molecular_function | anion transmembrane transporter activity | 0.002569529 | 2 | 127 |
Module202 | 16 | 34 | GO:0010228 | biological_process | vegetative to reproductive phase transition of meristem | 0.002814306 | 2 | 99 |
Module202 | 16 | 35 | GO:0015075 | molecular_function | ion transmembrane transporter activity | 0.002944299 | 3 | 504 |
Module202 | 16 | 36 | GO:0015711 | biological_process | organic anion transport | 0.003218484 | 2 | 106 |
Module202 | 16 | 37 | GO:0080144 | biological_process | amino acid homeostasis | 0.003261431 | 1 | 4 |
Module202 | 16 | 38 | GO:0009909 | biological_process | regulation of flower development | 0.003399587 | 2 | 109 |
Module202 | 16 | 39 | GO:0048831 | biological_process | regulation of shoot system development | 0.004306585 | 2 | 123 |
Module202 | 16 | 40 | GO:0015179 | molecular_function | L-amino acid transmembrane transporter activity | 0.004867503 | 1 | 8 |
Module202 | 16 | 41 | GO:0060919 | biological_process | auxin influx | 0.004888517 | 1 | 6 |
Module202 | 16 | 42 | GO:0044767 | biological_process | single-organism developmental process | 0.004915209 | 5 | 1538 |
Module202 | 16 | 43 | GO:0009416 | biological_process | response to light stimulus | 0.005410574 | 3 | 463 |
Module202 | 16 | 44 | GO:0032502 | biological_process | developmental process | 0.005576457 | 5 | 1583 |
Module202 | 16 | 45 | GO:0009314 | biological_process | response to radiation | 0.005880226 | 3 | 477 |
Module202 | 16 | 46 | GO:0005249 | molecular_function | voltage-gated potassium channel activity | 0.006081042 | 1 | 10 |
Module202 | 16 | 47 | GO:0065008 | biological_process | regulation of biological quality | 0.006230475 | 3 | 487 |
Module202 | 16 | 48 | GO:2000241 | biological_process | regulation of reproductive process | 0.00633758 | 2 | 150 |
Module202 | 16 | 49 | GO:0071732 | biological_process | cellular response to nitric oxide | 0.006513189 | 1 | 8 |
Module202 | 16 | 50 | GO:0009727 | biological_process | detection of ethylene stimulus | 0.006513189 | 1 | 8 |
Module202 | 16 | 51 | GO:0022843 | molecular_function | voltage-gated cation channel activity | 0.006687312 | 1 | 11 |
Module202 | 16 | 52 | GO:0005267 | molecular_function | potassium channel activity | 0.007293249 | 1 | 12 |
Module202 | 16 | 53 | GO:0080161 | molecular_function | auxin transmembrane transporter activity | 0.007898854 | 1 | 13 |
Module202 | 16 | 54 | GO:0010252 | biological_process | auxin homeostasis | 0.008135449 | 1 | 10 |
Module202 | 16 | 55 | GO:0071731 | biological_process | response to nitric oxide | 0.008135449 | 1 | 10 |
Module202 | 16 | 56 | GO:1902170 | biological_process | cellular response to reactive nitrogen species | 0.008135449 | 1 | 10 |
Module202 | 16 | 57 | GO:0006879 | biological_process | cellular iron ion homeostasis | 0.008135449 | 1 | 10 |
Module202 | 16 | 58 | GO:0043090 | biological_process | amino acid import | 0.008135449 | 1 | 10 |
Module202 | 16 | 59 | GO:0015562 | molecular_function | efflux transmembrane transporter activity | 0.008504125 | 1 | 14 |
Module202 | 16 | 60 | GO:0005261 | molecular_function | cation channel activity | 0.009109065 | 1 | 15 |
Module202 | 16 | 61 | GO:0006820 | biological_process | anion transport | 0.009602145 | 2 | 186 |
Module202 | 16 | 62 | GO:0071281 | biological_process | cellular response to iron ion | 0.010564323 | 1 | 13 |
Module202 | 16 | 63 | GO:0010030 | biological_process | positive regulation of seed germination | 0.010564323 | 1 | 13 |
Module202 | 16 | 64 | GO:0055072 | biological_process | iron ion homeostasis | 0.011372746 | 1 | 14 |
Module202 | 16 | 65 | GO:0009720 | biological_process | detection of hormone stimulus | 0.011372746 | 1 | 14 |
Module202 | 16 | 66 | GO:0009726 | biological_process | detection of endogenous stimulus | 0.011372746 | 1 | 14 |
Module202 | 16 | 67 | GO:0006811 | biological_process | ion transport | 0.012606402 | 3 | 629 |
Module202 | 16 | 68 | GO:1900673 | biological_process | olefin metabolic process | 0.01298779 | 1 | 16 |
Module202 | 16 | 69 | GO:1900674 | biological_process | olefin biosynthetic process | 0.01298779 | 1 | 16 |
Module202 | 16 | 70 | GO:0009692 | biological_process | ethylene metabolic process | 0.01298779 | 1 | 16 |
Module202 | 16 | 71 | GO:0009693 | biological_process | ethylene biosynthetic process | 0.01298779 | 1 | 16 |
Module202 | 16 | 72 | GO:0043450 | biological_process | alkene biosynthetic process | 0.01298779 | 1 | 16 |
Module202 | 16 | 73 | GO:0043449 | biological_process | cellular alkene metabolic process | 0.01298779 | 1 | 16 |
Module202 | 16 | 74 | GO:0046916 | biological_process | cellular transition metal ion homeostasis | 0.013794412 | 1 | 17 |
Module202 | 16 | 75 | GO:0055081 | biological_process | anion homeostasis | 0.015405859 | 1 | 19 |
Module202 | 16 | 76 | GO:0009593 | biological_process | detection of chemical stimulus | 0.016210684 | 1 | 20 |
Module202 | 16 | 77 | GO:0071248 | biological_process | cellular response to metal ion | 0.017014911 | 1 | 21 |
Module202 | 16 | 78 | GO:0065007 | biological_process | biological regulation | 0.017443877 | 6 | 2926 |
Module202 | 16 | 79 | GO:0034614 | biological_process | cellular response to reactive oxygen species | 0.017818541 | 1 | 22 |
Module202 | 16 | 80 | GO:0007275 | biological_process | multicellular organism development | 0.01845985 | 4 | 1347 |
Module202 | 16 | 81 | GO:0015171 | molecular_function | amino acid transmembrane transporter activity | 0.018743028 | 1 | 31 |
Module202 | 16 | 82 | GO:0005244 | molecular_function | voltage-gated ion channel activity | 0.019941327 | 1 | 33 |
Module202 | 16 | 83 | GO:0022832 | molecular_function | voltage-gated channel activity | 0.019941327 | 1 | 33 |
Module202 | 16 | 84 | GO:0071241 | biological_process | cellular response to inorganic substance | 0.020225847 | 1 | 25 |
Module202 | 16 | 85 | GO:0044707 | biological_process | single-multicellular organism process | 0.020692548 | 4 | 1393 |
Module202 | 16 | 86 | GO:0003333 | biological_process | amino acid transmembrane transport | 0.02102709 | 1 | 26 |
Module202 | 16 | 87 | GO:0010039 | biological_process | response to iron ion | 0.02102709 | 1 | 26 |
Module202 | 16 | 88 | GO:0009628 | biological_process | response to abiotic stimulus | 0.022450488 | 4 | 1427 |
Module202 | 16 | 89 | GO:0044765 | biological_process | single-organism transport | 0.023039161 | 4 | 1438 |
Module202 | 16 | 90 | GO:0009908 | biological_process | flower development | 0.023055622 | 2 | 295 |
Module202 | 16 | 91 | GO:0034599 | biological_process | cellular response to oxidative stress | 0.024226108 | 1 | 30 |
Module202 | 16 | 92 | GO:1902578 | biological_process | single-organism localization | 0.024582122 | 4 | 1466 |
Module202 | 16 | 93 | GO:0009791 | biological_process | post-embryonic development | 0.024984314 | 3 | 812 |
Module202 | 16 | 94 | GO:0090567 | biological_process | reproductive shoot system development | 0.024990991 | 2 | 308 |
Module202 | 16 | 95 | GO:0032501 | biological_process | multicellular organismal process | 0.026014353 | 4 | 1491 |
Module202 | 16 | 96 | GO:0015079 | molecular_function | potassium ion transmembrane transporter activity | 0.027103504 | 1 | 45 |
Module202 | 16 | 97 | GO:0022836 | molecular_function | gated channel activity | 0.027103504 | 1 | 45 |
Module202 | 16 | 98 | GO:0015238 | molecular_function | drug transmembrane transporter activity | 0.028886671 | 1 | 48 |
Module202 | 16 | 99 | GO:0055076 | biological_process | transition metal ion homeostasis | 0.029006818 | 1 | 36 |
Module202 | 16 | 100 | GO:1903825 | biological_process | organic acid transmembrane transport | 0.02980153 | 1 | 37 |
Module202 | 16 | 101 | GO:0006875 | biological_process | cellular metal ion homeostasis | 0.02980153 | 1 | 37 |
Module202 | 16 | 102 | GO:0090484 | molecular_function | drug transporter activity | 0.030073815 | 1 | 50 |
Module202 | 16 | 103 | GO:0030003 | biological_process | cellular cation homeostasis | 0.03138918 | 1 | 39 |
Module202 | 16 | 104 | GO:1901699 | biological_process | cellular response to nitrogen compound | 0.033766226 | 1 | 42 |
Module202 | 16 | 105 | GO:0006865 | biological_process | amino acid transport | 0.034557396 | 1 | 43 |
Module202 | 16 | 106 | GO:0010029 | biological_process | regulation of seed germination | 0.034557396 | 1 | 43 |
Module202 | 16 | 107 | GO:0051606 | biological_process | detection of stimulus | 0.035347976 | 1 | 44 |
Module202 | 16 | 108 | GO:1900140 | biological_process | regulation of seedling development | 0.035347976 | 1 | 44 |
Module202 | 16 | 109 | GO:0060918 | biological_process | auxin transport | 0.036137968 | 1 | 45 |
Module202 | 16 | 110 | GO:0006855 | biological_process | drug transmembrane transport | 0.036137968 | 1 | 45 |
Module202 | 16 | 111 | GO:0009914 | biological_process | hormone transport | 0.036927372 | 1 | 46 |
Module202 | 16 | 112 | GO:0015893 | biological_process | drug transport | 0.036927372 | 1 | 46 |
Module202 | 16 | 113 | GO:0005216 | molecular_function | ion channel activity | 0.03716929 | 1 | 62 |
Module202 | 16 | 114 | GO:0042493 | biological_process | response to drug | 0.037716188 | 1 | 47 |
Module202 | 16 | 115 | GO:0006873 | biological_process | cellular ion homeostasis | 0.038504417 | 1 | 48 |
Module202 | 16 | 116 | GO:0033554 | biological_process | cellular response to stress | 0.042165588 | 2 | 409 |
Module202 | 16 | 117 | GO:0050896 | biological_process | response to stimulus | 0.04245237 | 6 | 3528 |
Module202 | 16 | 118 | GO:0022838 | molecular_function | substrate-specific channel activity | 0.0436324 | 1 | 73 |
Module202 | 16 | 119 | GO:0022803 | molecular_function | passive transmembrane transporter activity | 0.0436324 | 1 | 73 |
Module202 | 16 | 120 | GO:0015267 | molecular_function | channel activity | 0.0436324 | 1 | 73 |
Module202 | 16 | 121 | GO:0044699 | biological_process | single-organism process | 0.043887028 | 9 | 7015 |
Module202 | 16 | 122 | GO:0016036 | biological_process | cellular response to phosphate starvation | 0.044005603 | 1 | 55 |
Module202 | 16 | 123 | GO:0006813 | biological_process | potassium ion transport | 0.045572106 | 1 | 57 |
Module202 | 16 | 124 | GO:0055082 | biological_process | cellular chemical homeostasis | 0.046354482 | 1 | 58 |
Module202 | 16 | 125 | GO:0007568 | biological_process | aging | 0.047917486 | 1 | 60 |
Module202 | 16 | 126 | GO:0098656 | biological_process | anion transmembrane transport | 0.048698114 | 1 | 61 |
Module202 | 16 | 127 | GO:0007623 | biological_process | circadian rhythm | 0.04947816 | 1 | 62 |
Module202 | 16 | 128 | GO:0048511 | biological_process | rhythmic process | 0.04947816 | 1 | 62 |
Gene A | Gene B | Partial correlation coefficient |
---|---|---|
pin5 | pebp24 | 0.04 |
GRMZM2G031441 | GRMZM2G384661 | 0.0372 |
GRMZM2G031441 | pebp24 | 0.0375 |
phos4 | GRMZM2G384661 | 0.0551 |
phos4 | pebp24 | 0.0622 |
phos4 | GRMZM2G478160 | 0.0384 |
phos4 | mate1 | 0.0405 |
phos4 | phos1 | 0.0668 |
kch3 | pebp18 | 0.0364 |
kch3 | pebp24 | 0.055 |
pebp18 | GRMZM2G400806 | 0.0622 |
pebp18 | pebp24 | 0.2248 |
GRMZM2G168502 | acco2 | 0.037 |
GRMZM2G168502 | GRMZM2G384661 | 0.059 |
GRMZM2G168502 | pebp24 | 0.0367 |
GRMZM2G384661 | phos1 | 0.0391 |
GRMZM2G400806 | pebp24 | 0.0413 |
GRMZM2G400806 | GRMZM5G820822 | 0.0359 |
GRMZM2G409976 | pebp24 | 0.0389 |
pebp24 | GRMZM2G450273 | 0.0358 |
pebp24 | mate1 | 0.0467 |
GRMZM2G478160 | phos1 | 0.0511 |