This page contains information for Module218, including a list of the genes within the module, the Gene Ontology enrichement analysis results, and a heatmap showing these genes' tissue specific expression patterns. Also included is a subnetwork for the genes within the module. For this subnetwork, a SIF file (check here for details of SIF file format) is provided for downloding, which can be opened and viewed within the Cytoscape software. Alternatively, the subnetwork can be also can be opened and visualized by clicking the link provided below.
Maize Gene | Symbol | Moule No. | Arabidopsis Homologue | Arabidopsis Homologue Symbol | Arabidopsis Homologue Name | Arabidopsis Homologue Description | Arabidopsis Homologue TF_Family |
---|---|---|---|---|---|---|---|
AC202439.3_FG006 | Module218 | AT5G45380 | DUR3 | DEGRADATION OF UREA 3 | solute:sodium symporters;urea transmembrane transporters | ||
GRMZM2G059740 | Module218 | AT4G32300 | SD2-5 | S-domain-2 5 | S-domain-2 5 | ||
GRMZM2G076394 | Module218 | AT2G34410 | RWA3 | REDUCED WALL ACETYLATION 3 | O-acetyltransferase family protein | ||
GRMZM2G043799 | Module218 | AT4G00330 | CRCK2 | calmodulin-binding receptor-like cytoplasmic kinase 2 | calmodulin-binding receptor-like cytoplasmic kinase 2 | ||
GRMZM2G084486 | Module218 | AT4G13420 | HAK5 | high affinity K+ transporter 5 | high affinity K+ transporter 5 | ||
GRMZM2G080487 | Module218 | ||||||
GRMZM2G106493 | Module218 | AT5G65600 | AT5G65600 | Concanavalin A-like lectin protein kinase family protein | |||
GRMZM2G126572 | Module218 | AT3G60200 | AT3G60200 | ||||
GRMZM2G328785 | ptk1 | Module218 | AT2G19130 | AT2G19130 | S-locus lectin protein kinase family protein | ||
GRMZM2G370510 | Module218 | AT3G45870 | UMAMIT3 | Usually multiple acids move in and out Transporters 3 | nodulin MtN21 /EamA-like transporter family protein | ||
GRMZM2G411668 | Module218 | AT2G19130 | AT2G19130 | S-locus lectin protein kinase family protein | |||
GRMZM2G060481 | Module218 | AT1G68530 | KCS6 | 3-ketoacyl-CoA synthase 6 | 3-ketoacyl-CoA synthase 6 | ||
GRMZM2G576752 | Module218 | AT1G21240 | WAK3 | wall associated kinase 3 | wall associated kinase 3 | ||
GRMZM5G863076 | Module218 | AT4G15610 | AT4G15610 | Uncharacterised protein family (UPF0497) | |||
GRMZM5G863146 | Module218 | AT3G18215 | AT3G18215 | Protein of unknown function, DUF599 |
Module No. | Number of genes within the module | GO_Rank | GO ID | GO catogery | GO term | pValue | Number of genes with the GO within the module | Number of genes with the GO within the genome (background set) |
---|---|---|---|---|---|---|---|---|
Module218 | 15 | 1 | GO:0004674 | molecular_function | protein serine/threonine kinase activity | 4.09E-05 | 5 | 858 |
Module218 | 15 | 2 | GO:0048544 | biological_process | recognition of pollen | 0.000148533 | 2 | 28 |
Module218 | 15 | 3 | GO:0009875 | biological_process | pollen-pistil interaction | 0.00015948 | 2 | 29 |
Module218 | 15 | 4 | GO:0008037 | biological_process | cell recognition | 0.00015948 | 2 | 29 |
Module218 | 15 | 5 | GO:0004672 | molecular_function | protein kinase activity | 0.000165935 | 5 | 1149 |
Module218 | 15 | 6 | GO:0016773 | molecular_function | phosphotransferase activity, alcohol group as acceptor | 0.000330846 | 5 | 1329 |
Module218 | 15 | 7 | GO:0006468 | biological_process | protein phosphorylation | 0.000495647 | 5 | 1190 |
Module218 | 15 | 8 | GO:0016301 | molecular_function | kinase activity | 0.000511578 | 5 | 1458 |
Module218 | 15 | 9 | GO:0016772 | molecular_function | transferase activity, transferring phosphorus-containing groups | 0.001104776 | 5 | 1720 |
Module218 | 15 | 10 | GO:0016310 | biological_process | phosphorylation | 0.001626566 | 5 | 1537 |
Module218 | 15 | 11 | GO:0015204 | molecular_function | urea transmembrane transporter activity | 0.001645137 | 1 | 3 |
Module218 | 15 | 12 | GO:0015840 | biological_process | urea transport | 0.002002373 | 1 | 3 |
Module218 | 15 | 13 | GO:0071918 | biological_process | urea transmembrane transport | 0.002002373 | 1 | 3 |
Module218 | 15 | 14 | GO:0036211 | biological_process | protein modification process | 0.002924116 | 5 | 1748 |
Module218 | 15 | 15 | GO:0006464 | biological_process | cellular protein modification process | 0.002924116 | 5 | 1748 |
Module218 | 15 | 16 | GO:0016740 | molecular_function | transferase activity | 0.00323874 | 6 | 3316 |
Module218 | 15 | 17 | GO:0030246 | molecular_function | carbohydrate binding | 0.003415267 | 2 | 164 |
Module218 | 15 | 18 | GO:0005524 | molecular_function | ATP binding | 0.003515019 | 5 | 2216 |
Module218 | 15 | 19 | GO:0043412 | biological_process | macromolecule modification | 0.003813468 | 5 | 1854 |
Module218 | 15 | 20 | GO:0032559 | molecular_function | adenyl ribonucleotide binding | 0.004010707 | 5 | 2282 |
Module218 | 15 | 21 | GO:0005794 | cellular_component | Golgi apparatus | 0.004036923 | 3 | 542 |
Module218 | 15 | 22 | GO:0030554 | molecular_function | adenyl nucleotide binding | 0.004042341 | 5 | 2286 |
Module218 | 15 | 23 | GO:0042887 | molecular_function | amide transmembrane transporter activity | 0.004381687 | 1 | 8 |
Module218 | 15 | 24 | GO:0006796 | biological_process | phosphate-containing compound metabolic process | 0.005234031 | 5 | 1990 |
Module218 | 15 | 25 | GO:0006793 | biological_process | phosphorus metabolic process | 0.005375937 | 5 | 2002 |
Module218 | 15 | 26 | GO:0009856 | biological_process | pollination | 0.005685215 | 2 | 175 |
Module218 | 15 | 27 | GO:0044706 | biological_process | multi-multicellular organism process | 0.005685215 | 2 | 175 |
Module218 | 15 | 28 | GO:0035639 | molecular_function | purine ribonucleoside triphosphate binding | 0.005792833 | 5 | 2478 |
Module218 | 15 | 29 | GO:0019755 | biological_process | one-carbon compound transport | 0.005996429 | 1 | 9 |
Module218 | 15 | 30 | GO:0032550 | molecular_function | purine ribonucleoside binding | 0.006507838 | 5 | 2544 |
Module218 | 15 | 31 | GO:0032555 | molecular_function | purine ribonucleotide binding | 0.006507838 | 5 | 2544 |
Module218 | 15 | 32 | GO:0001883 | molecular_function | purine nucleoside binding | 0.006507838 | 5 | 2544 |
Module218 | 15 | 33 | GO:0032549 | molecular_function | ribonucleoside binding | 0.006587326 | 5 | 2551 |
Module218 | 15 | 34 | GO:0017076 | molecular_function | purine nucleotide binding | 0.00659874 | 5 | 2552 |
Module218 | 15 | 35 | GO:0001882 | molecular_function | nucleoside binding | 0.00659874 | 5 | 2552 |
Module218 | 15 | 36 | GO:0032553 | molecular_function | ribonucleotide binding | 0.006959873 | 5 | 2583 |
Module218 | 15 | 37 | GO:0097367 | molecular_function | carbohydrate derivative binding | 0.007273838 | 5 | 2609 |
Module218 | 15 | 38 | GO:0043168 | molecular_function | anion binding | 0.013336315 | 5 | 2999 |
Module218 | 15 | 39 | GO:0044703 | biological_process | multi-organism reproductive process | 0.013494016 | 2 | 274 |
Module218 | 15 | 40 | GO:0009834 | biological_process | plant-type secondary cell wall biogenesis | 0.021175681 | 1 | 32 |
Module218 | 15 | 41 | GO:1901265 | molecular_function | nucleoside phosphate binding | 0.02186005 | 5 | 3369 |
Module218 | 15 | 42 | GO:0000166 | molecular_function | nucleotide binding | 0.02186005 | 5 | 3369 |
Module218 | 15 | 43 | GO:0044267 | biological_process | cellular protein metabolic process | 0.022365573 | 5 | 2783 |
Module218 | 15 | 44 | GO:0036094 | molecular_function | small molecule binding | 0.024173758 | 5 | 3451 |
Module218 | 15 | 45 | GO:0015079 | molecular_function | potassium ion transmembrane transporter activity | 0.024425807 | 1 | 45 |
Module218 | 15 | 46 | GO:0030247 | molecular_function | polysaccharide binding | 0.02549898 | 1 | 47 |
Module218 | 15 | 47 | GO:0001871 | molecular_function | pattern binding | 0.02549898 | 1 | 47 |
Module218 | 15 | 48 | GO:0012505 | cellular_component | endomembrane system | 0.02688248 | 3 | 1074 |
Module218 | 15 | 49 | GO:0042886 | biological_process | amide transport | 0.028362212 | 1 | 43 |
Module218 | 15 | 50 | GO:0071804 | biological_process | cellular potassium ion transport | 0.029013201 | 1 | 44 |
Module218 | 15 | 51 | GO:0071805 | biological_process | potassium ion transmembrane transport | 0.029013201 | 1 | 44 |
Module218 | 15 | 52 | GO:0016020 | cellular_component | membrane | 0.034352886 | 6 | 4716 |
Module218 | 15 | 53 | GO:0009987 | biological_process | cellular process | 0.037324818 | 9 | 9353 |
Module218 | 15 | 54 | GO:0006813 | biological_process | potassium ion transport | 0.037440854 | 1 | 57 |
Module218 | 15 | 55 | GO:0019538 | biological_process | protein metabolic process | 0.041847092 | 5 | 3241 |
Module218 | 15 | 56 | GO:0022891 | molecular_function | substrate-specific transmembrane transporter activity | 0.043680454 | 2 | 625 |
Module218 | 15 | 57 | GO:0009832 | biological_process | plant-type cell wall biogenesis | 0.045162449 | 1 | 69 |
Gene A | Gene B | Partial correlation coefficient |
---|---|---|
AC202439.3_FG006 | GRMZM2G084486 | 0.0462 |
AC202439.3_FG006 | GRMZM5G863146 | 0.0351 |
GRMZM2G059740 | GRMZM2G106493 | 0.035 |
GRMZM2G076394 | GRMZM2G043799 | 0.0358 |
GRMZM2G076394 | ptk1 | 0.0426 |
GRMZM2G076394 | GRMZM2G370510 | 0.0381 |
GRMZM2G084486 | GRMZM2G080487 | 0.036 |
GRMZM2G084486 | GRMZM2G106493 | 0.0857 |
GRMZM2G084486 | GRMZM2G411668 | 0.0375 |
GRMZM2G084486 | GRMZM2G576752 | 0.0373 |
GRMZM2G080487 | GRMZM2G576752 | 0.0357 |
GRMZM2G106493 | ptk1 | 0.0543 |
GRMZM2G106493 | GRMZM2G411668 | 0.0373 |
GRMZM2G106493 | GRMZM5G863076 | 0.0479 |
GRMZM2G126572 | GRMZM5G863146 | 0.0362 |
GRMZM2G411668 | GRMZM2G060481 | 0.0354 |