This page contains information for Module225, including a list of the genes within the module, the Gene Ontology enrichement analysis results, and a heatmap showing these genes' tissue specific expression patterns. Also included is a subnetwork for the genes within the module. For this subnetwork, a SIF file (check here for details of SIF file format) is provided for downloding, which can be opened and viewed within the Cytoscape software. Alternatively, the subnetwork can be also can be opened and visualized by clicking the link provided below.
Maize Gene | Symbol | Moule No. | Arabidopsis Homologue | Arabidopsis Homologue Symbol | Arabidopsis Homologue Name | Arabidopsis Homologue Description | Arabidopsis Homologue TF_Family |
---|---|---|---|---|---|---|---|
AC202435.3_FG003 | Module225 | AT1G14700 | PAP3 | purple acid phosphatase 3 | purple acid phosphatase 3 | ||
GRMZM2G014089 | Module225 | AT1G02520 | ABCB11 | ATP-binding cassette B11 | P-glycoprotein 11 | ||
GRMZM2G087556 | Module225 | ||||||
GRMZM2G073223 | Module225 | AT5G59810 | SBT5.4 | Subtilase family protein | |||
GRMZM2G093422 | Module225 | AT2G45100 | AT2G45100 | Cyclin/Brf1-like TBP-binding protein | |||
GRMZM2G116823 | Module225 | AT5G06730 | AT5G06730 | Peroxidase superfamily protein | |||
GRMZM2G109286 | Module225 | AT1G13680 | AT1G13680 | PLC-like phosphodiesterases superfamily protein | |||
GRMZM2G138756 | Module225 | AT5G50400 | PAP27 | purple acid phosphatase 27 | purple acid phosphatase 27 | ||
GRMZM2G066801 | Module225 | AT3G13050 | NiaP | nicotinate transporter | Major facilitator superfamily protein | ||
GRMZM2G113800 | Module225 | AT1G44750 | PUP11 | purine permease 11 | purine permease 11 | ||
GRMZM2G315279 | Module225 | ||||||
GRMZM2G357081 | Module225 | AT5G26751 | SK 11 | shaggy-related kinase 11 | shaggy-related kinase 11 | ||
GRMZM2G456547 | Module225 | AT4G31240 | AT4G31240 | protein kinase C-like zinc finger protein | |||
GRMZM2G010363 | Module225 | AT5G47730 | AT5G47730 | Sec14p-like phosphatidylinositol transfer family protein |
Module No. | Number of genes within the module | GO_Rank | GO ID | GO catogery | GO term | pValue | Number of genes with the GO within the module | Number of genes with the GO within the genome (background set) |
---|---|---|---|---|---|---|---|---|
Module225 | 14 | 1 | GO:0052510 | biological_process | positive regulation by organism of defense response of other organism involved in symbiotic interaction | 0.00207638 | 1 | 4 |
Module225 | 14 | 2 | GO:0052509 | biological_process | positive regulation by symbiont of host defense response | 0.00207638 | 1 | 4 |
Module225 | 14 | 3 | GO:0052033 | biological_process | pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response | 0.00207638 | 1 | 4 |
Module225 | 14 | 4 | GO:0052305 | biological_process | positive regulation by organism of innate immune response in other organism involved in symbiotic interaction | 0.00207638 | 1 | 4 |
Module225 | 14 | 5 | GO:0052306 | biological_process | modulation by organism of innate immune response in other organism involved in symbiotic interaction | 0.00207638 | 1 | 4 |
Module225 | 14 | 6 | GO:0052308 | biological_process | pathogen-associated molecular pattern dependent modulation by organism of innate immune response in other organism involved in symbiotic interaction | 0.00207638 | 1 | 4 |
Module225 | 14 | 7 | GO:0052166 | biological_process | positive regulation by symbiont of host innate immune response | 0.00207638 | 1 | 4 |
Module225 | 14 | 8 | GO:0052167 | biological_process | modulation by symbiont of host innate immune response | 0.00207638 | 1 | 4 |
Module225 | 14 | 9 | GO:0052169 | biological_process | pathogen-associated molecular pattern dependent modulation by symbiont of host innate immune response | 0.00207638 | 1 | 4 |
Module225 | 14 | 10 | GO:0052257 | biological_process | pathogen-associated molecular pattern dependent induction by organism of innate immune response of other organism involved in symbiotic interaction | 0.00207638 | 1 | 4 |
Module225 | 14 | 11 | GO:0052564 | biological_process | response to immune response of other organism involved in symbiotic interaction | 0.002594898 | 1 | 5 |
Module225 | 14 | 12 | GO:0052552 | biological_process | modulation by organism of immune response of other organism involved in symbiotic interaction | 0.002594898 | 1 | 5 |
Module225 | 14 | 13 | GO:0052553 | biological_process | modulation by symbiont of host immune response | 0.002594898 | 1 | 5 |
Module225 | 14 | 14 | GO:0052555 | biological_process | positive regulation by organism of immune response of other organism involved in symbiotic interaction | 0.002594898 | 1 | 5 |
Module225 | 14 | 15 | GO:0052556 | biological_process | positive regulation by symbiont of host immune response | 0.002594898 | 1 | 5 |
Module225 | 14 | 16 | GO:0052572 | biological_process | response to host immune response | 0.002594898 | 1 | 5 |
Module225 | 14 | 17 | GO:0075136 | biological_process | response to host | 0.002594898 | 1 | 5 |
Module225 | 14 | 18 | GO:0052031 | biological_process | modulation by symbiont of host defense response | 0.002594898 | 1 | 5 |
Module225 | 14 | 19 | GO:0052173 | biological_process | response to defenses of other organism involved in symbiotic interaction | 0.002594898 | 1 | 5 |
Module225 | 14 | 20 | GO:0052255 | biological_process | modulation by organism of defense response of other organism involved in symbiotic interaction | 0.002594898 | 1 | 5 |
Module225 | 14 | 21 | GO:0052200 | biological_process | response to host defenses | 0.002594898 | 1 | 5 |
Module225 | 14 | 22 | GO:0047134 | molecular_function | protein-disulfide reductase activity | 0.003044694 | 1 | 5 |
Module225 | 14 | 23 | GO:0017025 | molecular_function | TBP-class protein binding | 0.004260234 | 1 | 7 |
Module225 | 14 | 24 | GO:0045926 | biological_process | negative regulation of growth | 0.007251171 | 1 | 14 |
Module225 | 14 | 25 | GO:0051817 | biological_process | modification of morphology or physiology of other organism involved in symbiotic interaction | 0.008283365 | 1 | 16 |
Module225 | 14 | 26 | GO:0044003 | biological_process | modification by symbiont of host morphology or physiology | 0.008283365 | 1 | 16 |
Module225 | 14 | 27 | GO:0016021 | cellular_component | integral component of membrane | 0.009035441 | 3 | 1436 |
Module225 | 14 | 28 | GO:0016668 | molecular_function | oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor | 0.009109065 | 1 | 15 |
Module225 | 14 | 29 | GO:0008134 | molecular_function | transcription factor binding | 0.009713672 | 1 | 16 |
Module225 | 14 | 30 | GO:0031224 | cellular_component | intrinsic component of membrane | 0.010207574 | 3 | 1498 |
Module225 | 14 | 31 | GO:0035821 | biological_process | modification of morphology or physiology of other organism | 0.010344992 | 1 | 20 |
Module225 | 14 | 32 | GO:0051701 | biological_process | interaction with host | 0.0118888 | 1 | 23 |
Module225 | 14 | 33 | GO:0042578 | molecular_function | phosphoric ester hydrolase activity | 0.012594882 | 2 | 288 |
Module225 | 14 | 34 | GO:0045089 | biological_process | positive regulation of innate immune response | 0.013944001 | 1 | 27 |
Module225 | 14 | 35 | GO:0050778 | biological_process | positive regulation of immune response | 0.014457228 | 1 | 28 |
Module225 | 14 | 36 | GO:0002684 | biological_process | positive regulation of immune system process | 0.014457228 | 1 | 28 |
Module225 | 14 | 37 | GO:0031349 | biological_process | positive regulation of defense response | 0.015482995 | 1 | 30 |
Module225 | 14 | 38 | GO:0016787 | molecular_function | hydrolase activity | 0.017786208 | 5 | 2828 |
Module225 | 14 | 39 | GO:0003993 | molecular_function | acid phosphatase activity | 0.019941327 | 1 | 33 |
Module225 | 14 | 40 | GO:0044425 | cellular_component | membrane part | 0.020019874 | 3 | 1895 |
Module225 | 14 | 41 | GO:0048519 | biological_process | negative regulation of biological process | 0.02081434 | 2 | 449 |
Module225 | 14 | 42 | GO:0044403 | biological_process | symbiosis, encompassing mutualism through parasitism | 0.022637778 | 1 | 44 |
Module225 | 14 | 43 | GO:0045088 | biological_process | regulation of innate immune response | 0.023147124 | 1 | 45 |
Module225 | 14 | 44 | GO:0044419 | biological_process | interspecies interaction between organisms | 0.023656243 | 1 | 46 |
Module225 | 14 | 45 | GO:0050776 | biological_process | regulation of immune response | 0.024165134 | 1 | 47 |
Module225 | 14 | 46 | GO:0002682 | biological_process | regulation of immune system process | 0.025182234 | 1 | 49 |
Module225 | 14 | 47 | GO:0006352 | biological_process | DNA-templated transcription, initiation | 0.027213708 | 1 | 53 |
Module225 | 14 | 48 | GO:0010043 | biological_process | response to zinc ion | 0.029747947 | 1 | 58 |
Module225 | 14 | 49 | GO:0008081 | molecular_function | phosphoric diester hydrolase activity | 0.031259652 | 1 | 52 |
Module225 | 14 | 50 | GO:0072593 | biological_process | reactive oxygen species metabolic process | 0.032276525 | 1 | 63 |
Module225 | 14 | 51 | GO:0040008 | biological_process | regulation of growth | 0.036310502 | 1 | 71 |
Module225 | 14 | 52 | GO:0048584 | biological_process | positive regulation of response to stimulus | 0.03882441 | 1 | 76 |
Module225 | 14 | 53 | GO:0016020 | cellular_component | membrane | 0.039855266 | 4 | 4716 |
Module225 | 14 | 54 | GO:1990267 | biological_process | response to transition metal nanoparticle | 0.044834869 | 1 | 88 |
Module225 | 14 | 55 | GO:0031347 | biological_process | regulation of defense response | 0.044834869 | 1 | 88 |
Module225 | 14 | 56 | GO:0009624 | biological_process | response to nematode | 0.045334283 | 1 | 89 |
Gene A | Gene B | Partial correlation coefficient |
---|---|---|
AC202435.3_FG003 | GRMZM2G087556 | 0.086 |
AC202435.3_FG003 | GRMZM2G093422 | 0.0353 |
AC202435.3_FG003 | GRMZM2G315279 | 0.0383 |
AC202435.3_FG003 | GRMZM2G357081 | 0.055 |
AC202435.3_FG003 | GRMZM2G456547 | 0.0883 |
GRMZM2G014089 | GRMZM2G456547 | 0.0391 |
GRMZM2G087556 | GRMZM2G073223 | 0.0425 |
GRMZM2G087556 | GRMZM2G456547 | 0.0466 |
GRMZM2G093422 | GRMZM2G315279 | 0.0397 |
GRMZM2G116823 | GRMZM2G109286 | 0.0527 |
GRMZM2G109286 | GRMZM2G456547 | 0.0883 |
GRMZM2G138756 | GRMZM2G066801 | 0.04 |
GRMZM2G138756 | GRMZM2G456547 | 0.0572 |
GRMZM2G113800 | GRMZM2G456547 | 0.0517 |
GRMZM2G456547 | GRMZM2G010363 | 0.0416 |