This page contains information for Module280, including a list of the genes within the module, the Gene Ontology enrichement analysis results, and a heatmap showing these genes' tissue specific expression patterns. Also included is a subnetwork for the genes within the module. For this subnetwork, a SIF file (check here for details of SIF file format) is provided for downloding, which can be opened and viewed within the Cytoscape software. Alternatively, the subnetwork can be also can be opened and visualized by clicking the link provided below.
Maize Gene | Symbol | Moule No. | Arabidopsis Homologue | Arabidopsis Homologue Symbol | Arabidopsis Homologue Name | Arabidopsis Homologue Description | Arabidopsis Homologue TF_Family |
---|---|---|---|---|---|---|---|
GRMZM2G006977 | Module280 | AT4G37640 | ACA2 | calcium ATPase 2 | calcium ATPase 2 | ||
GRMZM2G010909 | Module280 | AT5G01740 | AT5G01740 | Nuclear transport factor 2 (NTF2) family protein | |||
GRMZM2G056014 | cap1 | Module280 | AT1G07670 | ECA4 | endomembrane-type CA-ATPase 4 | endomembrane-type CA-ATPase 4 | |
GRMZM2G011592 | cax3 | Module280 | AT3G51860 | CAX3 | cation exchanger 3 | cation exchanger 3 | |
GRMZM2G123977 | Module280 | AT3G12360 | ITN1 | INCREASED TOLERANCE TO NACL | Ankyrin repeat family protein | ||
GRMZM2G126745 | Module280 | AT2G17020 | AT2G17020 | F-box/RNI-like superfamily protein | |||
GRMZM2G132712 | Module280 | AT5G57110 | ACA8 | autoinhibited Ca2+ -ATPase, isoform 8 | autoinhibited Ca2+ -ATPase, isoform 8 | ||
GRMZM2G145972 | Module280 | AT4G21490 | NDB3 | NAD(P)H dehydrogenase B3 | NAD(P)H dehydrogenase B3 | ||
GRMZM2G174896 | Module280 | AT5G21326 | CIPK26 | calcineurin B-like protein (CBL)-interacting protein kinase 26 | Ca2+regulated serine-threonine protein kinase family protein | ||
GRMZM2G423129 | Module280 | AT2G46600 | AT2G46600 | Calcium-binding EF-hand family protein | |||
GRMZM2G009940 | Module280 | AT4G11410 | AT4G11410 | NAD(P)-binding Rossmann-fold superfamily protein | |||
GRMZM2G305159 | Module280 | AT2G41560 | ACA4 | autoinhibited Ca(2+)-ATPase, isoform 4 | autoinhibited Ca(2+)-ATPase, isoform 4 |
Module No. | Number of genes within the module | GO_Rank | GO ID | GO catogery | GO term | pValue | Number of genes with the GO within the module | Number of genes with the GO within the genome (background set) |
---|---|---|---|---|---|---|---|---|
Module280 | 12 | 1 | GO:0015085 | molecular_function | calcium ion transmembrane transporter activity | 2.22E-09 | 4 | 28 |
Module280 | 12 | 2 | GO:0006816 | biological_process | calcium ion transport | 3.60E-09 | 4 | 29 |
Module280 | 12 | 3 | GO:0072509 | molecular_function | divalent inorganic cation transmembrane transporter activity | 6.39E-08 | 4 | 63 |
Module280 | 12 | 4 | GO:0005388 | molecular_function | calcium-transporting ATPase activity | 1.25E-07 | 3 | 16 |
Module280 | 12 | 5 | GO:0070838 | biological_process | divalent metal ion transport | 1.29E-07 | 4 | 69 |
Module280 | 12 | 6 | GO:0072511 | biological_process | divalent inorganic cation transport | 1.54E-07 | 4 | 72 |
Module280 | 12 | 7 | GO:0070588 | biological_process | calcium ion transmembrane transport | 2.83E-07 | 3 | 19 |
Module280 | 12 | 8 | GO:0015662 | molecular_function | ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism | 4.51E-07 | 3 | 24 |
Module280 | 12 | 9 | GO:0019829 | molecular_function | cation-transporting ATPase activity | 5.45E-07 | 4 | 107 |
Module280 | 12 | 10 | GO:0042625 | molecular_function | ATPase coupled ion transmembrane transporter activity | 5.45E-07 | 4 | 107 |
Module280 | 12 | 11 | GO:0030001 | biological_process | metal ion transport | 7.09E-07 | 5 | 269 |
Module280 | 12 | 12 | GO:0046873 | molecular_function | metal ion transmembrane transporter activity | 1.74E-06 | 4 | 143 |
Module280 | 12 | 13 | GO:0022804 | molecular_function | active transmembrane transporter activity | 1.86E-06 | 5 | 353 |
Module280 | 12 | 14 | GO:0042626 | molecular_function | ATPase activity, coupled to transmembrane movement of substances | 2.11E-06 | 4 | 150 |
Module280 | 12 | 15 | GO:0043492 | molecular_function | ATPase activity, coupled to movement of substances | 2.17E-06 | 4 | 151 |
Module280 | 12 | 16 | GO:0008324 | molecular_function | cation transmembrane transporter activity | 2.35E-06 | 5 | 370 |
Module280 | 12 | 17 | GO:0016820 | molecular_function | hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances | 2.40E-06 | 4 | 155 |
Module280 | 12 | 18 | GO:0030026 | biological_process | cellular manganese ion homeostasis | 2.97E-06 | 2 | 4 |
Module280 | 12 | 19 | GO:0015399 | molecular_function | primary active transmembrane transporter activity | 4.65E-06 | 4 | 183 |
Module280 | 12 | 20 | GO:0015405 | molecular_function | P-P-bond-hydrolysis-driven transmembrane transporter activity | 4.65E-06 | 4 | 183 |
Module280 | 12 | 21 | GO:0055071 | biological_process | manganese ion homeostasis | 7.42E-06 | 2 | 6 |
Module280 | 12 | 22 | GO:0006812 | biological_process | cation transport | 9.60E-06 | 5 | 457 |
Module280 | 12 | 23 | GO:0015075 | molecular_function | ion transmembrane transporter activity | 1.06E-05 | 5 | 504 |
Module280 | 12 | 24 | GO:0005516 | molecular_function | calmodulin binding | 2.15E-05 | 3 | 85 |
Module280 | 12 | 25 | GO:0022890 | molecular_function | inorganic cation transmembrane transporter activity | 2.60E-05 | 4 | 283 |
Module280 | 12 | 26 | GO:0022891 | molecular_function | substrate-specific transmembrane transporter activity | 3.02E-05 | 5 | 625 |
Module280 | 12 | 27 | GO:0042623 | molecular_function | ATPase activity, coupled | 3.23E-05 | 4 | 299 |
Module280 | 12 | 28 | GO:0006811 | biological_process | ion transport | 4.52E-05 | 5 | 629 |
Module280 | 12 | 29 | GO:0022892 | molecular_function | substrate-specific transporter activity | 5.13E-05 | 5 | 698 |
Module280 | 12 | 30 | GO:0046916 | biological_process | cellular transition metal ion homeostasis | 6.70E-05 | 2 | 17 |
Module280 | 12 | 31 | GO:0022857 | molecular_function | transmembrane transporter activity | 7.37E-05 | 5 | 753 |
Module280 | 12 | 32 | GO:0016887 | molecular_function | ATPase activity | 8.48E-05 | 4 | 383 |
Module280 | 12 | 33 | GO:0005215 | molecular_function | transporter activity | 0.000232113 | 5 | 959 |
Module280 | 12 | 34 | GO:0016021 | cellular_component | integral component of membrane | 0.000246788 | 5 | 1436 |
Module280 | 12 | 35 | GO:0098662 | biological_process | inorganic cation transmembrane transport | 0.000253977 | 3 | 178 |
Module280 | 12 | 36 | GO:0098655 | biological_process | cation transmembrane transport | 0.000258205 | 3 | 179 |
Module280 | 12 | 37 | GO:0098660 | biological_process | inorganic ion transmembrane transport | 0.000284536 | 3 | 185 |
Module280 | 12 | 38 | GO:0031224 | cellular_component | intrinsic component of membrane | 0.000303272 | 5 | 1498 |
Module280 | 12 | 39 | GO:0055076 | biological_process | transition metal ion homeostasis | 0.000308068 | 2 | 36 |
Module280 | 12 | 40 | GO:0006875 | biological_process | cellular metal ion homeostasis | 0.000325543 | 2 | 37 |
Module280 | 12 | 41 | GO:0030003 | biological_process | cellular cation homeostasis | 0.000361917 | 2 | 39 |
Module280 | 12 | 42 | GO:0006873 | biological_process | cellular ion homeostasis | 0.000548974 | 2 | 48 |
Module280 | 12 | 43 | GO:0034220 | biological_process | ion transmembrane transport | 0.00060286 | 3 | 239 |
Module280 | 12 | 44 | GO:0055082 | biological_process | cellular chemical homeostasis | 0.000801301 | 2 | 58 |
Module280 | 12 | 45 | GO:0044425 | cellular_component | membrane part | 0.000948862 | 5 | 1895 |
Module280 | 12 | 46 | GO:0055065 | biological_process | metal ion homeostasis | 0.0010055 | 2 | 65 |
Module280 | 12 | 47 | GO:0055080 | biological_process | cation homeostasis | 0.001198431 | 2 | 71 |
Module280 | 12 | 48 | GO:0017111 | molecular_function | nucleoside-triphosphatase activity | 0.001225591 | 4 | 771 |
Module280 | 12 | 49 | GO:0007338 | biological_process | single fertilization | 0.001483624 | 1 | 2 |
Module280 | 12 | 50 | GO:0006882 | biological_process | cellular zinc ion homeostasis | 0.001483624 | 1 | 2 |
Module280 | 12 | 51 | GO:0016462 | molecular_function | pyrophosphatase activity | 0.001514285 | 4 | 816 |
Module280 | 12 | 52 | GO:0098771 | biological_process | inorganic ion homeostasis | 0.001594643 | 2 | 82 |
Module280 | 12 | 53 | GO:0055085 | biological_process | transmembrane transport | 0.0016505 | 4 | 766 |
Module280 | 12 | 54 | GO:0016818 | molecular_function | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 0.001686508 | 4 | 840 |
Module280 | 12 | 55 | GO:0016817 | molecular_function | hydrolase activity, acting on acid anhydrides | 0.001832344 | 4 | 859 |
Module280 | 12 | 56 | GO:0009624 | biological_process | response to nematode | 0.001875137 | 2 | 89 |
Module280 | 12 | 57 | GO:0050801 | biological_process | ion homeostasis | 0.002045234 | 2 | 93 |
Module280 | 12 | 58 | GO:0044765 | biological_process | single-organism transport | 0.002184196 | 5 | 1438 |
Module280 | 12 | 59 | GO:0010042 | biological_process | response to manganese ion | 0.002224693 | 1 | 3 |
Module280 | 12 | 60 | GO:0010351 | biological_process | lithium ion transport | 0.002224693 | 1 | 3 |
Module280 | 12 | 61 | GO:1901265 | molecular_function | nucleoside phosphate binding | 0.002305276 | 7 | 3369 |
Module280 | 12 | 62 | GO:0000166 | molecular_function | nucleotide binding | 0.002305276 | 7 | 3369 |
Module280 | 12 | 63 | GO:1902578 | biological_process | single-organism localization | 0.002383118 | 5 | 1466 |
Module280 | 12 | 64 | GO:0036094 | molecular_function | small molecule binding | 0.002671345 | 7 | 3451 |
Module280 | 12 | 65 | GO:0048878 | biological_process | chemical homeostasis | 0.003544671 | 2 | 123 |
Module280 | 12 | 66 | GO:0015369 | molecular_function | calcium:proton antiporter activity | 0.004017281 | 1 | 6 |
Module280 | 12 | 67 | GO:0051139 | molecular_function | metal ion:proton antiporter activity | 0.0046854 | 1 | 7 |
Module280 | 12 | 68 | GO:0015368 | molecular_function | calcium:cation antiporter activity | 0.0046854 | 1 | 7 |
Module280 | 12 | 69 | GO:0006828 | biological_process | manganese ion transport | 0.005922619 | 1 | 8 |
Module280 | 12 | 70 | GO:0051592 | biological_process | response to calcium ion | 0.006660722 | 1 | 9 |
Module280 | 12 | 71 | GO:0006874 | biological_process | cellular calcium ion homeostasis | 0.006660722 | 1 | 9 |
Module280 | 12 | 72 | GO:0009555 | biological_process | pollen development | 0.006890995 | 2 | 173 |
Module280 | 12 | 73 | GO:0043168 | molecular_function | anion binding | 0.00739193 | 6 | 2999 |
Module280 | 12 | 74 | GO:0072503 | biological_process | cellular divalent inorganic cation homeostasis | 0.007398332 | 1 | 10 |
Module280 | 12 | 75 | GO:0006810 | biological_process | transport | 0.007863919 | 5 | 1919 |
Module280 | 12 | 76 | GO:0016020 | cellular_component | membrane | 0.007951017 | 6 | 4716 |
Module280 | 12 | 77 | GO:0051234 | biological_process | establishment of localization | 0.008061522 | 5 | 1930 |
Module280 | 12 | 78 | GO:0055069 | biological_process | zinc ion homeostasis | 0.008872073 | 1 | 12 |
Module280 | 12 | 79 | GO:0051179 | biological_process | localization | 0.008946854 | 5 | 1977 |
Module280 | 12 | 80 | GO:0015491 | molecular_function | cation:cation antiporter activity | 0.009350834 | 1 | 14 |
Module280 | 12 | 81 | GO:0072505 | biological_process | divalent inorganic anion homeostasis | 0.009608205 | 1 | 13 |
Module280 | 12 | 82 | GO:0072506 | biological_process | trivalent inorganic anion homeostasis | 0.009608205 | 1 | 13 |
Module280 | 12 | 83 | GO:0055062 | biological_process | phosphate ion homeostasis | 0.009608205 | 1 | 13 |
Module280 | 12 | 84 | GO:0055083 | biological_process | monovalent inorganic anion homeostasis | 0.009608205 | 1 | 13 |
Module280 | 12 | 85 | GO:0046872 | molecular_function | metal ion binding | 0.010007509 | 6 | 3184 |
Module280 | 12 | 86 | GO:0043621 | molecular_function | protein self-association | 0.010015699 | 1 | 15 |
Module280 | 12 | 87 | GO:0005524 | molecular_function | ATP binding | 0.010198118 | 5 | 2216 |
Module280 | 12 | 88 | GO:0043169 | molecular_function | cation binding | 0.010198493 | 6 | 3196 |
Module280 | 12 | 89 | GO:0055074 | biological_process | calcium ion homeostasis | 0.010343845 | 1 | 14 |
Module280 | 12 | 90 | GO:0019725 | biological_process | cellular homeostasis | 0.010761648 | 2 | 218 |
Module280 | 12 | 91 | GO:0032559 | molecular_function | adenyl ribonucleotide binding | 0.011551948 | 5 | 2282 |
Module280 | 12 | 92 | GO:0030554 | molecular_function | adenyl nucleotide binding | 0.011637928 | 5 | 2286 |
Module280 | 12 | 93 | GO:0048229 | biological_process | gametophyte development | 0.012628519 | 2 | 237 |
Module280 | 12 | 94 | GO:0055081 | biological_process | anion homeostasis | 0.014014672 | 1 | 19 |
Module280 | 12 | 95 | GO:0006814 | biological_process | sodium ion transport | 0.014014672 | 1 | 19 |
Module280 | 12 | 96 | GO:0010091 | biological_process | trichome branching | 0.014747365 | 1 | 20 |
Module280 | 12 | 97 | GO:0044699 | biological_process | single-organism process | 0.014889155 | 9 | 7015 |
Module280 | 12 | 98 | GO:0005886 | cellular_component | plasma membrane | 0.015366601 | 4 | 2055 |
Module280 | 12 | 99 | GO:0035639 | molecular_function | purine ribonucleoside triphosphate binding | 0.016327 | 5 | 2478 |
Module280 | 12 | 100 | GO:0005509 | molecular_function | calcium ion binding | 0.016441331 | 2 | 300 |
Module280 | 12 | 101 | GO:0032550 | molecular_function | purine ribonucleoside binding | 0.018208199 | 5 | 2544 |
Module280 | 12 | 102 | GO:0032555 | molecular_function | purine ribonucleotide binding | 0.018208199 | 5 | 2544 |
Module280 | 12 | 103 | GO:0001883 | molecular_function | purine nucleoside binding | 0.018208199 | 5 | 2544 |
Module280 | 12 | 104 | GO:0072507 | biological_process | divalent inorganic cation homeostasis | 0.018403487 | 1 | 25 |
Module280 | 12 | 105 | GO:0032549 | molecular_function | ribonucleoside binding | 0.01841625 | 5 | 2551 |
Module280 | 12 | 106 | GO:0017076 | molecular_function | purine nucleotide binding | 0.018446107 | 5 | 2552 |
Module280 | 12 | 107 | GO:0001882 | molecular_function | nucleoside binding | 0.018446107 | 5 | 2552 |
Module280 | 12 | 108 | GO:0042592 | biological_process | homeostatic process | 0.018771526 | 2 | 292 |
Module280 | 12 | 109 | GO:0099516 | molecular_function | ion antiporter activity | 0.019281317 | 1 | 29 |
Module280 | 12 | 110 | GO:0032553 | molecular_function | ribonucleotide binding | 0.019388591 | 5 | 2583 |
Module280 | 12 | 111 | GO:0097367 | molecular_function | carbohydrate derivative binding | 0.020204609 | 5 | 2609 |
Module280 | 12 | 112 | GO:0009566 | biological_process | fertilization | 0.024227888 | 1 | 33 |
Module280 | 12 | 113 | GO:0015299 | molecular_function | solute:proton antiporter activity | 0.024540491 | 1 | 37 |
Module280 | 12 | 114 | GO:0015298 | molecular_function | solute:cation antiporter activity | 0.025851272 | 1 | 39 |
Module280 | 12 | 115 | GO:0005783 | cellular_component | endoplasmic reticulum | 0.027308102 | 2 | 479 |
Module280 | 12 | 116 | GO:0071944 | cellular_component | cell periphery | 0.029126957 | 4 | 2455 |
Module280 | 12 | 117 | GO:0044763 | biological_process | single-organism cellular process | 0.030086897 | 7 | 4840 |
Module280 | 12 | 118 | GO:0010090 | biological_process | trichome morphogenesis | 0.035064874 | 1 | 48 |
Module280 | 12 | 119 | GO:0009705 | cellular_component | plant-type vacuole membrane | 0.039154053 | 1 | 70 |
Module280 | 12 | 120 | GO:0010026 | biological_process | trichome differentiation | 0.041514951 | 1 | 57 |
Module280 | 12 | 121 | GO:0098588 | cellular_component | bounding membrane of organelle | 0.042963765 | 2 | 611 |
Module280 | 12 | 122 | GO:0000041 | biological_process | transition metal ion transport | 0.045081536 | 1 | 62 |
Module280 | 12 | 123 | GO:0090626 | biological_process | plant epidermis morphogenesis | 0.045081536 | 1 | 62 |
Module280 | 12 | 124 | GO:0065008 | biological_process | regulation of biological quality | 0.048395969 | 2 | 487 |
Gene A | Gene B | Partial correlation coefficient |
---|---|---|
GRMZM2G006977 | GRMZM2G123977 | 0.0423 |
GRMZM2G006977 | GRMZM2G145972 | 0.0387 |
GRMZM2G010909 | GRMZM2G123977 | 0.0501 |
cap1 | cax3 | 0.052 |
cap1 | GRMZM2G123977 | 0.0531 |
cap1 | GRMZM2G126745 | 0.0499 |
cax3 | GRMZM2G132712 | 0.0436 |
cax3 | GRMZM2G174896 | 0.0488 |
cax3 | GRMZM2G423129 | 0.0435 |
GRMZM2G123977 | GRMZM2G126745 | 0.0357 |
GRMZM2G126745 | GRMZM2G132712 | 0.0369 |
GRMZM2G126745 | GRMZM2G423129 | 0.0535 |
GRMZM2G132712 | GRMZM2G174896 | 0.035 |
GRMZM2G132712 | GRMZM2G423129 | 0.0657 |
GRMZM2G423129 | GRMZM2G009940 | 0.0389 |
GRMZM2G423129 | GRMZM2G305159 | 0.0419 |