Module287
This page contains information for Module287, including a list of the genes within the module, the Gene Ontology enrichement analysis results, and a heatmap showing these genes' tissue specific expression patterns. Also included is a subnetwork for the genes within the module. For this subnetwork, a SIF file (check here for details of SIF file format ) is provided for downloding, which can be opened and viewed within the Cytoscape software . Alternatively, the subnetwork can be also can be opened and visualized by clicking the link provided below.
The list of genes within the module (containing 12 genes) Click to Show / Hide Gene List
Gene Ontology enrichment analysis Click to Show / Hide Results
Module No. Number of genes within the module GO_Rank GO ID GO catogery GO term pValue Number of genes with the GO within the module Number of genes with the GO within the genome (background set)
Module287 12 1 GO:0032259 biological_process methylation 0.002457881 2 277
Module287 12 2 GO:0036260 biological_process RNA capping 0.002669038 1 9
Module287 12 3 GO:0009452 biological_process 7-methylguanosine RNA capping 0.002669038 1 9
Module287 12 4 GO:0008168 molecular_function methyltransferase activity 0.00436786 2 287
Module287 12 5 GO:0016741 molecular_function transferase activity, transferring one-carbon groups 0.004825332 2 302
Module287 12 6 GO:0001510 biological_process RNA methylation 0.008876013 1 30
Module287 12 7 GO:0016740 molecular_function transferase activity 0.017608947 4 3316
Module287 12 8 GO:0009451 biological_process RNA modification 0.026741561 1 91
Module287 12 9 GO:0000151 cellular_component ubiquitin ligase complex 0.034563632 1 123
Module287 12 10 GO:0043414 biological_process macromolecule methylation 0.03457167 1 118
Module287 12 11 GO:0016567 biological_process protein ubiquitination 0.040916747 1 140
Module287 12 12 GO:0032446 biological_process protein modification by small protein conjugation 0.042641781 1 146
Module287 12 13 GO:0070647 biological_process protein modification by small protein conjugation or removal 0.04665781 1 160
A development heatmap for the genes within the module (showing these genes' tissue-specific expression patterns)Click to Download the Heatmap
A subnetwork extracted for the genes witin module
All gene pairs of the subnetwork Click to Show / Hide Gene Pairs
Gene A Gene B Partial correlation coefficient
GRMZM2G024312 GRMZM2G361100 0.0401
GRMZM2G024312 GRMZM5G875038 0.0722
GRMZM2G082714 GRMZM5G875038 0.065
GRMZM2G045675 GRMZM2G151887 0.0391
GRMZM2G045675 GRMZM2G327051 0.0434
GRMZM2G098988 GRMZM5G875038 0.0494
GRMZM2G151887 GRMZM2G704428 0.0353
GRMZM2G162945 GRMZM2G361100 0.0423
GRMZM2G175910 GRMZM5G875038 0.0441
GRMZM2G327051 GRMZM5G875038 0.0732
GRMZM2G366383 GRMZM2G704428 0.0416
A sif file of the subnetwork (This file conains the information of the subnetwork, which be opened using Cytoscape to produce a visualization of the subenetwork.)Click to Download the SIF file
Visualization of the subnetwork Click to Visualize the Subnetwork