This page contains information for Module332, including a list of the genes within the module, the Gene Ontology enrichement analysis results, and a heatmap showing these genes' tissue specific expression patterns. Also included is a subnetwork for the genes within the module. For this subnetwork, a SIF file (check here for details of SIF file format) is provided for downloding, which can be opened and viewed within the Cytoscape software. Alternatively, the subnetwork can be also can be opened and visualized by clicking the link provided below.
Maize Gene | Symbol | Moule No. | Arabidopsis Homologue | Arabidopsis Homologue Symbol | Arabidopsis Homologue Name | Arabidopsis Homologue Description | Arabidopsis Homologue TF_Family |
---|---|---|---|---|---|---|---|
GRMZM2G079777 | Module332 | AT3G58730 | AT3G58730 | vacuolar ATP synthase subunit D (VATD) / V-ATPase D subunit / vacuolar proton pump D subunit (VATPD) | |||
GRMZM2G021635 | Module332 | AT3G58730 | AT3G58730 | vacuolar ATP synthase subunit D (VATD) / V-ATPase D subunit / vacuolar proton pump D subunit (VATPD) | |||
GRMZM2G094928 | Module332 | AT3G01390 | VMA10 | vacuolar membrane ATPase 10 | vacuolar membrane ATPase 10 | ||
GRMZM2G045135 | umc1254 | Module332 | AT5G10460 | AT5G10460 | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein | ||
GRMZM2G101020 | atp1 | Module332 | AT1G19910 | AVA-P2 | ATPase, F0/V0 complex, subunit C protein | ||
AC216067.3_FG002 | Module332 | AT1G19910 | AVA-P2 | ATPase, F0/V0 complex, subunit C protein | |||
GRMZM2G028432 | vpp4 | Module332 | AT2G16510 | AT2G16510 | ATPase, F0/V0 complex, subunit C protein | ||
GRMZM2G124103 | Module332 | AT3G01390 | VMA10 | vacuolar membrane ATPase 10 | vacuolar membrane ATPase 10 | ||
GRMZM2G177005 | Module332 | AT1G19910 | AVA-P2 | ATPase, F0/V0 complex, subunit C protein | |||
GRMZM5G893252 | Module332 | AT1G19910 | AVA-P2 | ATPase, F0/V0 complex, subunit C protein | |||
GRMZM2G115750 | Module332 | AT3G24160 | PMP | putative type 1 membrane protein | putative type 1 membrane protein |
Module No. | Number of genes within the module | GO_Rank | GO ID | GO catogery | GO term | pValue | Number of genes with the GO within the module | Number of genes with the GO within the genome (background set) |
---|---|---|---|---|---|---|---|---|
Module332 | 11 | 1 | GO:0033176 | cellular_component | proton-transporting V-type ATPase complex | 4.84E-16 | 7 | 33 |
Module332 | 11 | 2 | GO:0006818 | biological_process | hydrogen transport | 6.39E-15 | 7 | 97 |
Module332 | 11 | 3 | GO:0015992 | biological_process | proton transport | 6.39E-15 | 7 | 97 |
Module332 | 11 | 4 | GO:0016469 | cellular_component | proton-transporting two-sector ATPase complex | 2.69E-13 | 7 | 77 |
Module332 | 11 | 5 | GO:0015672 | biological_process | monovalent inorganic cation transport | 5.34E-13 | 7 | 180 |
Module332 | 11 | 6 | GO:0005774 | cellular_component | vacuolar membrane | 4.05E-12 | 9 | 373 |
Module332 | 11 | 7 | GO:0044437 | cellular_component | vacuolar part | 4.56E-12 | 9 | 378 |
Module332 | 11 | 8 | GO:0033179 | cellular_component | proton-transporting V-type ATPase, V0 domain | 4.90E-12 | 5 | 19 |
Module332 | 11 | 9 | GO:0022857 | molecular_function | transmembrane transporter activity | 8.29E-12 | 9 | 753 |
Module332 | 11 | 10 | GO:0090662 | biological_process | ATP hydrolysis coupled transmembrane transport | 2.30E-11 | 5 | 47 |
Module332 | 11 | 11 | GO:0015991 | biological_process | ATP hydrolysis coupled proton transport | 2.30E-11 | 5 | 47 |
Module332 | 11 | 12 | GO:0015988 | biological_process | energy coupled proton transmembrane transport, against electrochemical gradient | 2.30E-11 | 5 | 47 |
Module332 | 11 | 13 | GO:0098805 | cellular_component | whole membrane | 6.31E-11 | 9 | 506 |
Module332 | 11 | 14 | GO:0005215 | molecular_function | transporter activity | 7.30E-11 | 9 | 959 |
Module332 | 11 | 15 | GO:0005773 | cellular_component | vacuole | 9.69E-11 | 10 | 838 |
Module332 | 11 | 16 | GO:0033177 | cellular_component | proton-transporting two-sector ATPase complex, proton-transporting domain | 1.16E-10 | 5 | 34 |
Module332 | 11 | 17 | GO:1902600 | biological_process | hydrogen ion transmembrane transport | 2.58E-10 | 5 | 75 |
Module332 | 11 | 18 | GO:0098588 | cellular_component | bounding membrane of organelle | 3.42E-10 | 9 | 611 |
Module332 | 11 | 19 | GO:0006812 | biological_process | cation transport | 3.83E-10 | 7 | 457 |
Module332 | 11 | 20 | GO:0006811 | biological_process | ion transport | 3.59E-09 | 7 | 629 |
Module332 | 11 | 21 | GO:0031090 | cellular_component | organelle membrane | 5.04E-09 | 9 | 826 |
Module332 | 11 | 22 | GO:0015078 | molecular_function | hydrogen ion transmembrane transporter activity | 1.10E-08 | 5 | 142 |
Module332 | 11 | 23 | GO:0098662 | biological_process | inorganic cation transmembrane transport | 2.06E-08 | 5 | 178 |
Module332 | 11 | 24 | GO:0098655 | biological_process | cation transmembrane transport | 2.12E-08 | 5 | 179 |
Module332 | 11 | 25 | GO:0098660 | biological_process | inorganic ion transmembrane transport | 2.50E-08 | 5 | 185 |
Module332 | 11 | 26 | GO:0098796 | cellular_component | membrane protein complex | 3.92E-08 | 7 | 414 |
Module332 | 11 | 27 | GO:0015077 | molecular_function | monovalent inorganic cation transmembrane transporter activity | 6.30E-08 | 5 | 201 |
Module332 | 11 | 28 | GO:0034220 | biological_process | ion transmembrane transport | 9.02E-08 | 5 | 239 |
Module332 | 11 | 29 | GO:0022890 | molecular_function | inorganic cation transmembrane transporter activity | 3.46E-07 | 5 | 283 |
Module332 | 11 | 30 | GO:0044765 | biological_process | single-organism transport | 1.13E-06 | 7 | 1438 |
Module332 | 11 | 31 | GO:1902578 | biological_process | single-organism localization | 1.29E-06 | 7 | 1466 |
Module332 | 11 | 32 | GO:0008324 | molecular_function | cation transmembrane transporter activity | 1.30E-06 | 5 | 370 |
Module332 | 11 | 33 | GO:0016820 | molecular_function | hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances | 1.54E-06 | 4 | 155 |
Module332 | 11 | 34 | GO:0015075 | molecular_function | ion transmembrane transporter activity | 5.95E-06 | 5 | 504 |
Module332 | 11 | 35 | GO:0006810 | biological_process | transport | 8.24E-06 | 7 | 1919 |
Module332 | 11 | 36 | GO:0051234 | biological_process | establishment of localization | 8.57E-06 | 7 | 1930 |
Module332 | 11 | 37 | GO:0051179 | biological_process | localization | 1.01E-05 | 7 | 1977 |
Module332 | 11 | 38 | GO:0022891 | molecular_function | substrate-specific transmembrane transporter activity | 1.70E-05 | 5 | 625 |
Module332 | 11 | 39 | GO:0055085 | biological_process | transmembrane transport | 2.84E-05 | 5 | 766 |
Module332 | 11 | 40 | GO:0022892 | molecular_function | substrate-specific transporter activity | 2.90E-05 | 5 | 698 |
Module332 | 11 | 41 | GO:0016471 | cellular_component | vacuolar proton-transporting V-type ATPase complex | 3.54E-05 | 2 | 9 |
Module332 | 11 | 42 | GO:0043234 | cellular_component | protein complex | 8.17E-05 | 7 | 1283 |
Module332 | 11 | 43 | GO:0005886 | cellular_component | plasma membrane | 0.000191476 | 8 | 2055 |
Module332 | 11 | 44 | GO:0044446 | cellular_component | intracellular organelle part | 0.000427008 | 9 | 3055 |
Module332 | 11 | 45 | GO:0044422 | cellular_component | organelle part | 0.00043285 | 9 | 3060 |
Module332 | 11 | 46 | GO:0044444 | cellular_component | cytoplasmic part | 0.000642167 | 11 | 5412 |
Module332 | 11 | 47 | GO:0071944 | cellular_component | cell periphery | 0.000703377 | 8 | 2455 |
Module332 | 11 | 48 | GO:0044425 | cellular_component | membrane part | 0.000999187 | 7 | 1895 |
Module332 | 11 | 49 | GO:0016817 | molecular_function | hydrolase activity, acting on acid anhydrides | 0.001216213 | 4 | 859 |
Module332 | 11 | 50 | GO:0032991 | cellular_component | macromolecular complex | 0.001331316 | 7 | 1984 |
Module332 | 11 | 51 | GO:0005737 | cellular_component | cytoplasm | 0.001661308 | 11 | 5900 |
Module332 | 11 | 52 | GO:0016020 | cellular_component | membrane | 0.002065481 | 10 | 4716 |
Module332 | 11 | 53 | GO:0043231 | cellular_component | intracellular membrane-bounded organelle | 0.002694735 | 11 | 6165 |
Module332 | 11 | 54 | GO:0043227 | cellular_component | membrane-bounded organelle | 0.002699551 | 11 | 6166 |
Module332 | 11 | 55 | GO:0042626 | molecular_function | ATPase activity, coupled to transmembrane movement of substances | 0.003562101 | 2 | 150 |
Module332 | 11 | 56 | GO:0043492 | molecular_function | ATPase activity, coupled to movement of substances | 0.00360874 | 2 | 151 |
Module332 | 11 | 57 | GO:0000325 | cellular_component | plant-type vacuole | 0.004992586 | 2 | 104 |
Module332 | 11 | 58 | GO:0015399 | molecular_function | primary active transmembrane transporter activity | 0.005251543 | 2 | 183 |
Module332 | 11 | 59 | GO:0015405 | molecular_function | P-P-bond-hydrolysis-driven transmembrane transporter activity | 0.005251543 | 2 | 183 |
Module332 | 11 | 60 | GO:0043229 | cellular_component | intracellular organelle | 0.006337384 | 11 | 6663 |
Module332 | 11 | 61 | GO:0043226 | cellular_component | organelle | 0.006358356 | 11 | 6665 |
Module332 | 11 | 62 | GO:0016021 | cellular_component | integral component of membrane | 0.010504073 | 5 | 1436 |
Module332 | 11 | 63 | GO:0031224 | cellular_component | intrinsic component of membrane | 0.012564806 | 5 | 1498 |
Module332 | 11 | 64 | GO:0042623 | molecular_function | ATPase activity, coupled | 0.013528564 | 2 | 299 |
Module332 | 11 | 65 | GO:0016787 | molecular_function | hydrolase activity | 0.017786208 | 5 | 2828 |
Module332 | 11 | 66 | GO:0022804 | molecular_function | active transmembrane transporter activity | 0.018537241 | 2 | 353 |
Module332 | 11 | 67 | GO:0016887 | molecular_function | ATPase activity | 0.021614586 | 2 | 383 |
Module332 | 11 | 68 | GO:0044424 | cellular_component | intracellular part | 0.031821939 | 11 | 7715 |
Module332 | 11 | 69 | GO:0044699 | biological_process | single-organism process | 0.045072977 | 7 | 7015 |
Gene A | Gene B | Partial correlation coefficient |
---|---|---|
GRMZM2G079777 | GRMZM2G021635 | 0.0388 |
GRMZM2G079777 | GRMZM5G893252 | 0.0427 |
GRMZM2G094928 | umc1254 | 0.0367 |
GRMZM2G094928 | GRMZM2G124103 | 0.0423 |
GRMZM2G094928 | GRMZM2G177005 | 0.0368 |
atp1 | AC216067.3_FG002 | 0.0356 |
atp1 | vpp4 | 0.0477 |
atp1 | GRMZM2G177005 | 0.0362 |
AC216067.3_FG002 | GRMZM2G177005 | 0.0526 |
AC216067.3_FG002 | GRMZM5G893252 | 0.0354 |
GRMZM2G124103 | GRMZM2G177005 | 0.0368 |
GRMZM2G177005 | GRMZM5G893252 | 0.0383 |
GRMZM5G893252 | GRMZM2G115750 | 0.0352 |