Module336
This page contains information for Module336, including a list of the genes within the module, the Gene Ontology enrichement analysis results, and a heatmap showing these genes' tissue specific expression patterns. Also included is a subnetwork for the genes within the module. For this subnetwork, a SIF file (check here for details of SIF file format ) is provided for downloding, which can be opened and viewed within the Cytoscape software . Alternatively, the subnetwork can be also can be opened and visualized by clicking the link provided below.
The list of genes within the module (containing 11 genes) Click to Show / Hide Gene List
Gene Ontology enrichment analysis Click to Show / Hide Results
Module No. Number of genes within the module GO_Rank GO ID GO catogery GO term pValue Number of genes with the GO within the module Number of genes with the GO within the genome (background set)
Module336 11 1 GO:0042780 biological_process tRNA 3'-end processing 0.000890274 1 3
Module336 11 2 GO:0042781 molecular_function 3'-tRNA processing endoribonuclease activity 0.001096959 1 3
Module336 11 3 GO:0043628 biological_process ncRNA 3'-end processing 0.001186899 1 4
Module336 11 4 GO:0031123 biological_process RNA 3'-end processing 0.005628365 1 19
Module336 11 5 GO:0006888 biological_process ER to Golgi vesicle-mediated transport 0.008286124 1 28
Module336 11 6 GO:0016891 molecular_function endoribonuclease activity, producing 5'-phosphomonoesters 0.00874763 1 24
Module336 11 7 GO:0016893 molecular_function endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters 0.012011507 1 33
Module336 11 8 GO:0004521 molecular_function endoribonuclease activity 0.012735595 1 35
Module336 11 9 GO:0048193 biological_process Golgi vesicle transport 0.017985683 1 61
Module336 11 10 GO:0008033 biological_process tRNA processing 0.017985683 1 61
Module336 11 11 GO:0004540 molecular_function ribonuclease activity 0.018512398 1 51
Module336 11 12 GO:0004519 molecular_function endonuclease activity 0.024977604 1 69
Module336 11 13 GO:0034470 biological_process ncRNA processing 0.033993288 1 116
Module336 11 14 GO:0006399 biological_process tRNA metabolic process 0.038036511 1 130
Module336 11 15 GO:0015934 cellular_component large ribosomal subunit 0.045629754 1 163
A development heatmap for the genes within the module (showing these genes' tissue-specific expression patterns)Click to Download the Heatmap
A subnetwork extracted for the genes witin module
All gene pairs of the subnetwork Click to Show / Hide Gene Pairs
Gene A Gene B Partial correlation coefficient
GRMZM2G121663 GRMZM2G018062 0.0378
GRMZM2G121663 GRMZM2G147727 0.0385
GRMZM2G147727 GRMZM2G078382 0.035
GRMZM2G147727 GRMZM2G092131 0.0398
GRMZM2G078382 GRMZM5G836322 0.0367
GRMZM2G092131 GRMZM5G890241 0.0379
GRMZM2G058681 GRMZM5G836322 0.0352
GRMZM2G469012 GRMZM2G003979 0.0395
GRMZM2G003979 GRMZM5G890241 0.0399
GRMZM5G890241 GRMZM2G020401 0.0375
A sif file of the subnetwork (This file conains the information of the subnetwork, which be opened using Cytoscape to produce a visualization of the subenetwork.)Click to Download the SIF file
Visualization of the subnetwork Click to Visualize the Subnetwork