Module359
This page contains information for Module359, including a list of the genes within the module, the Gene Ontology enrichement analysis results, and a heatmap showing these genes' tissue specific expression patterns. Also included is a subnetwork for the genes within the module. For this subnetwork, a SIF file (check here for details of SIF file format ) is provided for downloding, which can be opened and viewed within the Cytoscape software . Alternatively, the subnetwork can be also can be opened and visualized by clicking the link provided below.
The list of genes within the module (containing 10 genes) Click to Show / Hide Gene List
Gene Ontology enrichment analysis Click to Show / Hide Results
Module No. Number of genes within the module GO_Rank GO ID GO catogery GO term pValue Number of genes with the GO within the module Number of genes with the GO within the genome (background set)
Module359 10 1 GO:0045003 biological_process double-strand break repair via synthesis-dependent strand annealing 0.000296824 1 4
Module359 10 2 GO:0010332 biological_process response to gamma radiation 0.000890472 1 12
Module359 10 3 GO:0010212 biological_process response to ionizing radiation 0.001187296 1 16
Module359 10 4 GO:0000724 biological_process double-strand break repair via homologous recombination 0.00148412 1 20
Module359 10 5 GO:0000725 biological_process recombinational repair 0.00148412 1 20
Module359 10 6 GO:0006302 biological_process double-strand break repair 0.002374592 1 32
Module359 10 7 GO:0006310 biological_process DNA recombination 0.004897596 1 66
Module359 10 8 GO:0006281 biological_process DNA repair 0.013505491 1 182
Module359 10 9 GO:0006974 biological_process cellular response to DNA damage stimulus 0.014247551 1 192
Module359 10 10 GO:0006259 biological_process DNA metabolic process 0.027901454 1 376
Module359 10 11 GO:0033554 biological_process cellular response to stress 0.030350252 1 409
Module359 10 12 GO:0004386 molecular_function helicase activity 0.031128952 1 172
Module359 10 13 GO:0009314 biological_process response to radiation 0.03539626 1 477
A development heatmap for the genes within the module (showing these genes' tissue-specific expression patterns)Click to Download the Heatmap
A subnetwork extracted for the genes witin module
All gene pairs of the subnetwork Click to Show / Hide Gene Pairs
Gene A Gene B Partial correlation coefficient
GRMZM2G031958 GRMZM2G405133 0.0428
GRMZM2G059821 GRMZM2G055119 0.0373
GRMZM2G059821 GRMZM2G083138 0.0453
GRMZM2G059821 GRMZM2G125449 0.0872
GRMZM2G055119 GRMZM2G125449 0.0368
GRMZM2G055119 GRMZM2G701888 0.0425
GRMZM2G083138 GRMZM2G405133 0.0356
GRMZM2G083138 GRMZM6G157558 0.0359
GRMZM2G125449 GRMZM2G162267 0.1205
GRMZM2G125449 GRMZM2G701888 0.0407
GRMZM2G130580 GRMZM2G162267 0.0481
A sif file of the subnetwork (This file conains the information of the subnetwork, which be opened using Cytoscape to produce a visualization of the subenetwork.)Click to Download the SIF file
Visualization of the subnetwork Click to Visualize the Subnetwork