This page contains information for Module382, including a list of the genes within the module, the Gene Ontology enrichement analysis results, and a heatmap showing these genes' tissue specific expression patterns. Also included is a subnetwork for the genes within the module. For this subnetwork, a SIF file (check here for details of SIF file format) is provided for downloding, which can be opened and viewed within the Cytoscape software. Alternatively, the subnetwork can be also can be opened and visualized by clicking the link provided below.
Maize Gene | Symbol | Moule No. | Arabidopsis Homologue | Arabidopsis Homologue Symbol | Arabidopsis Homologue Name | Arabidopsis Homologue Description | Arabidopsis Homologue TF_Family |
---|---|---|---|---|---|---|---|
AC196489.3_FG002 | Module382 | AT2G37190 | AT2G37190 | Ribosomal protein L11 family protein | |||
AC197246.3_FG001 | Module382 | AT2G43130 | ARA4 | P-loop containing nucleoside triphosphate hydrolases superfamily protein | |||
AC234161.1_FG010 | Module382 | AT5G47570 | AT5G47570 | ||||
GRMZM2G008252 | Module382 | AT1G68680 | AT1G68680 | ||||
GRMZM2G069458 | Module382 | AT2G33040 | ATP3 | gamma subunit of Mt ATP synthase | gamma subunit of Mt ATP synthase | ||
GRMZM2G109561 | Module382 | AT3G10050 | OMR1 | L-O-methylthreonine resistant 1 | L-O-methylthreonine resistant 1 | ||
GRMZM2G112050 | Module382 | AT4G00100 | RPS13A | ribosomal protein S13A | ribosomal protein S13A | ||
GRMZM2G144101 | Module382 | AT3G46560 | TIM9 | Tim10/DDP family zinc finger protein | |||
GRMZM2G322413 | Module382 | AT5G27850 | AT5G27850 | Ribosomal protein L18e/L15 superfamily protein |
Module No. | Number of genes within the module | GO_Rank | GO ID | GO catogery | GO term | pValue | Number of genes with the GO within the module | Number of genes with the GO within the genome (background set) |
---|---|---|---|---|---|---|---|---|
Module382 | 9 | 1 | GO:0005743 | cellular_component | mitochondrial inner membrane | 0.000191384 | 3 | 163 |
Module382 | 9 | 2 | GO:0031966 | cellular_component | mitochondrial membrane | 0.000324927 | 3 | 195 |
Module382 | 9 | 3 | GO:0019866 | cellular_component | organelle inner membrane | 0.000398463 | 3 | 209 |
Module382 | 9 | 4 | GO:0005740 | cellular_component | mitochondrial envelope | 0.000415506 | 3 | 212 |
Module382 | 9 | 5 | GO:0003735 | molecular_function | structural constituent of ribosome | 0.000541177 | 3 | 505 |
Module382 | 9 | 6 | GO:0044429 | cellular_component | mitochondrial part | 0.000746874 | 3 | 259 |
Module382 | 9 | 7 | GO:0005747 | cellular_component | mitochondrial respiratory chain complex I | 0.000842044 | 2 | 59 |
Module382 | 9 | 8 | GO:0032991 | cellular_component | macromolecular complex | 0.000866146 | 6 | 1984 |
Module382 | 9 | 9 | GO:0005198 | molecular_function | structural molecule activity | 0.000896484 | 3 | 600 |
Module382 | 9 | 10 | GO:0030964 | cellular_component | NADH dehydrogenase complex | 0.001021312 | 2 | 65 |
Module382 | 9 | 11 | GO:0045271 | cellular_component | respiratory chain complex I | 0.001021312 | 2 | 65 |
Module382 | 9 | 12 | GO:1901566 | biological_process | organonitrogen compound biosynthetic process | 0.001152099 | 4 | 1315 |
Module382 | 9 | 13 | GO:0005746 | cellular_component | mitochondrial respiratory chain | 0.00207834 | 2 | 93 |
Module382 | 9 | 14 | GO:0098803 | cellular_component | respiratory chain complex | 0.00207834 | 2 | 93 |
Module382 | 9 | 15 | GO:0070469 | cellular_component | respiratory chain | 0.002893738 | 2 | 110 |
Module382 | 9 | 16 | GO:0098796 | cellular_component | membrane protein complex | 0.002896637 | 3 | 414 |
Module382 | 9 | 17 | GO:0098800 | cellular_component | inner mitochondrial membrane protein complex | 0.003321904 | 2 | 118 |
Module382 | 9 | 18 | GO:0006412 | biological_process | translation | 0.003397952 | 3 | 781 |
Module382 | 9 | 19 | GO:0043043 | biological_process | peptide biosynthetic process | 0.00349872 | 3 | 789 |
Module382 | 9 | 20 | GO:1901564 | biological_process | organonitrogen compound metabolic process | 0.003637315 | 4 | 1779 |
Module382 | 9 | 21 | GO:0098798 | cellular_component | mitochondrial protein complex | 0.003778145 | 2 | 126 |
Module382 | 9 | 22 | GO:0006518 | biological_process | peptide metabolic process | 0.003798908 | 3 | 812 |
Module382 | 9 | 23 | GO:0043604 | biological_process | amide biosynthetic process | 0.003934333 | 3 | 822 |
Module382 | 9 | 24 | GO:1990204 | cellular_component | oxidoreductase complex | 0.00413859 | 2 | 132 |
Module382 | 9 | 25 | GO:0043603 | biological_process | cellular amide metabolic process | 0.004581363 | 3 | 867 |
Module382 | 9 | 26 | GO:0044455 | cellular_component | mitochondrial membrane part | 0.005039823 | 2 | 146 |
Module382 | 9 | 27 | GO:0046933 | molecular_function | proton-transporting ATP synthase activity, rotational mechanism | 0.00874763 | 1 | 24 |
Module382 | 9 | 28 | GO:0031970 | cellular_component | organelle envelope lumen | 0.009063811 | 1 | 12 |
Module382 | 9 | 29 | GO:0005758 | cellular_component | mitochondrial intermembrane space | 0.009063811 | 1 | 12 |
Module382 | 9 | 30 | GO:0005840 | cellular_component | ribosome | 0.009168066 | 3 | 623 |
Module382 | 9 | 31 | GO:0046961 | molecular_function | proton-transporting ATPase activity, rotational mechanism | 0.010199349 | 1 | 28 |
Module382 | 9 | 32 | GO:0036442 | molecular_function | hydrogen-exporting ATPase activity | 0.011286976 | 1 | 31 |
Module382 | 9 | 33 | GO:0005795 | cellular_component | Golgi stack | 0.012819131 | 1 | 17 |
Module382 | 9 | 34 | GO:0044271 | biological_process | cellular nitrogen compound biosynthetic process | 0.013377626 | 4 | 2526 |
Module382 | 9 | 35 | GO:1990904 | cellular_component | ribonucleoprotein complex | 0.013716516 | 3 | 721 |
Module382 | 9 | 36 | GO:0030529 | cellular_component | intracellular ribonucleoprotein complex | 0.013716516 | 3 | 721 |
Module382 | 9 | 37 | GO:0015031 | biological_process | protein transport | 0.014054886 | 2 | 431 |
Module382 | 9 | 38 | GO:0044769 | molecular_function | ATPase activity, coupled to transmembrane movement of ions, rotational mechanism | 0.014182445 | 1 | 39 |
Module382 | 9 | 39 | GO:0045184 | biological_process | establishment of protein localization | 0.014305801 | 2 | 435 |
Module382 | 9 | 40 | GO:0045261 | cellular_component | proton-transporting ATP synthase complex, catalytic core F(1) | 0.015066341 | 1 | 20 |
Module382 | 9 | 41 | GO:0008104 | biological_process | protein localization | 0.015525009 | 2 | 454 |
Module382 | 9 | 42 | GO:0015985 | biological_process | energy coupled proton transport, down electrochemical gradient | 0.017242231 | 1 | 39 |
Module382 | 9 | 43 | GO:0015986 | biological_process | ATP synthesis coupled proton transport | 0.017242231 | 1 | 39 |
Module382 | 9 | 44 | GO:0031090 | cellular_component | organelle membrane | 0.019849201 | 3 | 826 |
Module382 | 9 | 45 | GO:0031967 | cellular_component | organelle envelope | 0.02103603 | 3 | 844 |
Module382 | 9 | 46 | GO:0031975 | cellular_component | envelope | 0.021644562 | 3 | 853 |
Module382 | 9 | 47 | GO:0005798 | cellular_component | Golgi-associated vesicle | 0.021781136 | 1 | 29 |
Module382 | 9 | 48 | GO:0033036 | biological_process | macromolecule localization | 0.021822785 | 2 | 543 |
Module382 | 9 | 49 | GO:0006754 | biological_process | ATP biosynthetic process | 0.022060378 | 1 | 50 |
Module382 | 9 | 50 | GO:0009145 | biological_process | purine nucleoside triphosphate biosynthetic process | 0.025987841 | 1 | 59 |
Module382 | 9 | 51 | GO:0009206 | biological_process | purine ribonucleoside triphosphate biosynthetic process | 0.025987841 | 1 | 59 |
Module382 | 9 | 52 | GO:0005739 | cellular_component | mitochondrion | 0.026188924 | 3 | 916 |
Module382 | 9 | 53 | GO:0009201 | biological_process | ribonucleoside triphosphate biosynthetic process | 0.026858823 | 1 | 61 |
Module382 | 9 | 54 | GO:0033178 | cellular_component | proton-transporting two-sector ATPase complex, catalytic domain | 0.027716181 | 1 | 37 |
Module382 | 9 | 55 | GO:0009142 | biological_process | nucleoside triphosphate biosynthetic process | 0.027729156 | 1 | 63 |
Module382 | 9 | 56 | GO:0017111 | molecular_function | nucleoside-triphosphatase activity | 0.029169936 | 2 | 771 |
Module382 | 9 | 57 | GO:0045259 | cellular_component | proton-transporting ATP synthase complex | 0.02919501 | 1 | 39 |
Module382 | 9 | 58 | GO:0009168 | biological_process | purine ribonucleoside monophosphate biosynthetic process | 0.030770215 | 1 | 70 |
Module382 | 9 | 59 | GO:0009127 | biological_process | purine nucleoside monophosphate biosynthetic process | 0.030770215 | 1 | 70 |
Module382 | 9 | 60 | GO:0016462 | molecular_function | pyrophosphatase activity | 0.032433773 | 2 | 816 |
Module382 | 9 | 61 | GO:1902600 | biological_process | hydrogen ion transmembrane transport | 0.032937544 | 1 | 75 |
Module382 | 9 | 62 | GO:0016818 | molecular_function | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 0.034234276 | 2 | 840 |
Module382 | 9 | 63 | GO:0009156 | biological_process | ribonucleoside monophosphate biosynthetic process | 0.034668498 | 1 | 79 |
Module382 | 9 | 64 | GO:0016817 | molecular_function | hydrolase activity, acting on acid anhydrides | 0.035688657 | 2 | 859 |
Module382 | 9 | 65 | GO:0009124 | biological_process | nucleoside monophosphate biosynthetic process | 0.035965018 | 1 | 82 |
Module382 | 9 | 66 | GO:0071702 | biological_process | organic substance transport | 0.036753561 | 2 | 717 |
Module382 | 9 | 67 | GO:0046129 | biological_process | purine ribonucleoside biosynthetic process | 0.037691454 | 1 | 86 |
Module382 | 9 | 68 | GO:0042451 | biological_process | purine nucleoside biosynthetic process | 0.037691454 | 1 | 86 |
Module382 | 9 | 69 | GO:0019829 | molecular_function | cation-transporting ATPase activity | 0.038509889 | 1 | 107 |
Module382 | 9 | 70 | GO:0042625 | molecular_function | ATPase coupled ion transmembrane transporter activity | 0.038509889 | 1 | 107 |
Module382 | 9 | 71 | GO:1902494 | cellular_component | catalytic complex | 0.039573922 | 2 | 431 |
Module382 | 9 | 72 | GO:0009152 | biological_process | purine ribonucleotide biosynthetic process | 0.039845875 | 1 | 91 |
Module382 | 9 | 73 | GO:0044444 | cellular_component | cytoplasmic part | 0.041088926 | 7 | 5412 |
Module382 | 9 | 74 | GO:0006810 | biological_process | transport | 0.041236474 | 3 | 1919 |
Module382 | 9 | 75 | GO:0006164 | biological_process | purine nucleotide biosynthetic process | 0.041566517 | 1 | 95 |
Module382 | 9 | 76 | GO:0051234 | biological_process | establishment of localization | 0.041865389 | 3 | 1930 |
Module382 | 9 | 77 | GO:0042455 | biological_process | ribonucleoside biosynthetic process | 0.042425874 | 1 | 97 |
Module382 | 9 | 78 | GO:0009163 | biological_process | nucleoside biosynthetic process | 0.042425874 | 1 | 97 |
Module382 | 9 | 79 | GO:0006818 | biological_process | hydrogen transport | 0.042425874 | 1 | 97 |
Module382 | 9 | 80 | GO:0015992 | biological_process | proton transport | 0.042425874 | 1 | 97 |
Module382 | 9 | 81 | GO:0009260 | biological_process | ribonucleotide biosynthetic process | 0.044142661 | 1 | 101 |
Module382 | 9 | 82 | GO:0046390 | biological_process | ribose phosphate biosynthetic process | 0.044142661 | 1 | 101 |
Module382 | 9 | 83 | GO:0051179 | biological_process | localization | 0.044613414 | 3 | 1977 |
Module382 | 9 | 84 | GO:0034641 | biological_process | cellular nitrogen compound metabolic process | 0.044874376 | 4 | 3545 |
Module382 | 9 | 85 | GO:0044249 | biological_process | cellular biosynthetic process | 0.044918392 | 4 | 3546 |
Module382 | 9 | 86 | GO:0003924 | molecular_function | GTPase activity | 0.046272575 | 1 | 129 |
Module382 | 9 | 87 | GO:1901576 | biological_process | organic substance biosynthetic process | 0.047611528 | 4 | 3606 |
Module382 | 9 | 88 | GO:1901659 | biological_process | glycosyl compound biosynthetic process | 0.048423411 | 1 | 111 |
Module382 | 9 | 89 | GO:0072522 | biological_process | purine-containing compound biosynthetic process | 0.049277641 | 1 | 113 |
Gene A | Gene B | Partial correlation coefficient |
---|---|---|
AC196489.3_FG002 | AC197246.3_FG001 | 0.0511 |
AC196489.3_FG002 | AC234161.1_FG010 | 0.06 |
AC196489.3_FG002 | GRMZM2G008252 | 0.0615 |
AC196489.3_FG002 | GRMZM2G112050 | 0.0395 |
AC196489.3_FG002 | GRMZM2G144101 | 0.035 |
AC196489.3_FG002 | GRMZM2G322413 | 0.0361 |
AC197246.3_FG001 | AC234161.1_FG010 | 0.0542 |
AC234161.1_FG010 | GRMZM2G008252 | 0.0456 |
AC234161.1_FG010 | GRMZM2G069458 | 0.0353 |
AC234161.1_FG010 | GRMZM2G109561 | 0.0396 |