Module472
This page contains information for Module472, including a list of the genes within the module, the Gene Ontology enrichement analysis results, and a heatmap showing these genes' tissue specific expression patterns. Also included is a subnetwork for the genes within the module. For this subnetwork, a SIF file (check here for details of SIF file format ) is provided for downloding, which can be opened and viewed within the Cytoscape software . Alternatively, the subnetwork can be also can be opened and visualized by clicking the link provided below.
The list of genes within the module (containing 8 genes) Click to Show / Hide Gene List
Gene Ontology enrichment analysis Click to Show / Hide Results
Module No. Number of genes within the module GO_Rank GO ID GO catogery GO term pValue Number of genes with the GO within the module Number of genes with the GO within the genome (background set)
Module472 8 1 GO:0032266 molecular_function phosphatidylinositol-3-phosphate binding 0.000487641 1 2
Module472 8 2 GO:0044452 cellular_component nucleolar part 0.000568505 1 3
Module472 8 3 GO:0005732 cellular_component small nucleolar ribonucleoprotein complex 0.000568505 1 3
Module472 8 4 GO:0006379 biological_process mRNA cleavage 0.000593582 1 4
Module472 8 5 GO:0090501 biological_process RNA phosphodiester bond hydrolysis 0.001186988 1 8
Module472 8 6 GO:1901981 molecular_function phosphatidylinositol phosphate binding 0.001949495 1 8
Module472 8 7 GO:0032182 molecular_function ubiquitin-like protein binding 0.003652964 1 15
Module472 8 8 GO:0043130 molecular_function ubiquitin binding 0.003652964 1 15
Module472 8 9 GO:0090305 biological_process nucleic acid phosphodiester bond hydrolysis 0.005335893 1 36
Module472 8 10 GO:0006364 biological_process rRNA processing 0.007702819 1 52
Module472 8 11 GO:0016072 biological_process rRNA metabolic process 0.008441905 1 57
Module472 8 12 GO:0008033 biological_process tRNA processing 0.009032976 1 61
Module472 8 13 GO:0035091 molecular_function phosphatidylinositol binding 0.009718986 1 40
Module472 8 14 GO:0004540 molecular_function ribonuclease activity 0.012379243 1 51
Module472 8 15 GO:0042254 biological_process ribosome biogenesis 0.01287064 1 87
Module472 8 16 GO:0022613 biological_process ribonucleoprotein complex biogenesis 0.014049962 1 95
Module472 8 17 GO:0016071 biological_process mRNA metabolic process 0.016406491 1 111
Module472 8 18 GO:0034470 biological_process ncRNA processing 0.017142328 1 116
Module472 8 19 GO:0006399 biological_process tRNA metabolic process 0.019201208 1 130
Module472 8 20 GO:0005543 molecular_function phospholipid binding 0.025600218 1 106
Module472 8 21 GO:0034660 biological_process ncRNA metabolic process 0.029463222 1 200
Module472 8 22 GO:0004518 molecular_function nuclease activity 0.033706513 1 140
Module472 8 23 GO:0008289 molecular_function lipid binding 0.036318276 1 151
Module472 8 24 GO:0006396 biological_process RNA processing 0.045625205 1 311
A development heatmap for the genes within the module (showing these genes' tissue-specific expression patterns)Click to Download the Heatmap
A subnetwork extracted for the genes witin module
All gene pairs of the subnetwork Click to Show / Hide Gene Pairs
Gene A Gene B Partial correlation coefficient
GRMZM2G006399 GRMZM2G511318 0.0377
GRMZM2G117022 GRMZM2G162668 0.0393
GRMZM2G151979 GRMZM2G511318 0.041
GRMZM2G162668 GRMZM2G511318 0.0353
GRMZM2G511318 GRMZM2G061105 0.035
GRMZM2G511318 GRMZM2G330298 0.0387
GRMZM2G511318 GRMZM5G854284 0.0464
A sif file of the subnetwork (This file conains the information of the subnetwork, which be opened using Cytoscape to produce a visualization of the subenetwork.)Click to Download the SIF file
Visualization of the subnetwork Click to Visualize the Subnetwork