This page contains information for Module543, including a list of the genes within the module, the Gene Ontology enrichement analysis results, and a heatmap showing these genes' tissue specific expression patterns. Also included is a subnetwork for the genes within the module. For this subnetwork, a SIF file (check here for details of SIF file format) is provided for downloding, which can be opened and viewed within the Cytoscape software. Alternatively, the subnetwork can be also can be opened and visualized by clicking the link provided below.
Maize Gene | Symbol | Moule No. | Arabidopsis Homologue | Arabidopsis Homologue Symbol | Arabidopsis Homologue Name | Arabidopsis Homologue Description | Arabidopsis Homologue TF_Family |
---|---|---|---|---|---|---|---|
GRMZM2G027723 | cesa2 | Module543 | AT4G32410 | CESA1 | cellulose synthase 1 | cellulose synthase 1 | |
GRMZM2G025231 | cesa7 | Module543 | AT4G39350 | CESA2 | cellulose synthase A2 | cellulose synthase A2 | |
GRMZM2G028353 | Module543 | AT4G39350 | CESA2 | cellulose synthase A2 | cellulose synthase A2 | ||
GRMZM2G112336 | cesa1 | Module543 | AT4G32410 | CESA1 | cellulose synthase 1 | cellulose synthase 1 | |
GRMZM2G162702 | Module543 | AT1G56720 | AT1G56720 | Protein kinase superfamily protein | |||
GRMZM2G424832 | cesa4 | Module543 | AT5G05170 | CEV1 | CONSTITUTIVE EXPRESSION OF VSP 1 | Cellulose synthase family protein | |
GRMZM5G826714 | Module543 | AT5G60920 | COB | COBRA | COBRA-like extracellular glycosyl-phosphatidyl inositol-anchored protein family |
Module No. | Number of genes within the module | GO_Rank | GO ID | GO catogery | GO term | pValue | Number of genes with the GO within the module | Number of genes with the GO within the genome (background set) |
---|---|---|---|---|---|---|---|---|
Module543 | 7 | 1 | GO:0016760 | molecular_function | cellulose synthase (UDP-forming) activity | 1.03E-13 | 5 | 31 |
Module543 | 7 | 2 | GO:0016759 | molecular_function | cellulose synthase activity | 1.03E-13 | 5 | 31 |
Module543 | 7 | 3 | GO:0030244 | biological_process | cellulose biosynthetic process | 1.78E-11 | 5 | 54 |
Module543 | 7 | 4 | GO:0035251 | molecular_function | UDP-glucosyltransferase activity | 2.10E-11 | 5 | 86 |
Module543 | 7 | 5 | GO:0030243 | biological_process | cellulose metabolic process | 2.58E-11 | 5 | 58 |
Module543 | 7 | 6 | GO:0046527 | molecular_function | glucosyltransferase activity | 4.10E-11 | 5 | 98 |
Module543 | 7 | 7 | GO:0051274 | biological_process | beta-glucan biosynthetic process | 6.33E-11 | 5 | 69 |
Module543 | 7 | 8 | GO:0051273 | biological_process | beta-glucan metabolic process | 8.45E-11 | 5 | 73 |
Module543 | 7 | 9 | GO:0009250 | biological_process | glucan biosynthetic process | 4.44E-10 | 5 | 101 |
Module543 | 7 | 10 | GO:0008194 | molecular_function | UDP-glycosyltransferase activity | 8.70E-10 | 5 | 179 |
Module543 | 7 | 11 | GO:0033692 | biological_process | cellular polysaccharide biosynthetic process | 1.54E-09 | 5 | 129 |
Module543 | 7 | 12 | GO:0009833 | biological_process | plant-type primary cell wall biogenesis | 1.72E-09 | 3 | 6 |
Module543 | 7 | 13 | GO:0000271 | biological_process | polysaccharide biosynthetic process | 1.79E-09 | 5 | 133 |
Module543 | 7 | 14 | GO:0006073 | biological_process | cellular glucan metabolic process | 6.97E-09 | 5 | 174 |
Module543 | 7 | 15 | GO:0044042 | biological_process | glucan metabolic process | 6.97E-09 | 5 | 174 |
Module543 | 7 | 16 | GO:0034637 | biological_process | cellular carbohydrate biosynthetic process | 7.17E-09 | 5 | 175 |
Module543 | 7 | 17 | GO:0044264 | biological_process | cellular polysaccharide metabolic process | 1.40E-08 | 5 | 200 |
Module543 | 7 | 18 | GO:0009832 | biological_process | plant-type cell wall biogenesis | 2.18E-08 | 4 | 69 |
Module543 | 7 | 19 | GO:0016051 | biological_process | carbohydrate biosynthetic process | 2.59E-08 | 5 | 226 |
Module543 | 7 | 20 | GO:0005976 | biological_process | polysaccharide metabolic process | 3.29E-08 | 5 | 237 |
Module543 | 7 | 21 | GO:0042546 | biological_process | cell wall biogenesis | 5.85E-08 | 4 | 88 |
Module543 | 7 | 22 | GO:0016758 | molecular_function | transferase activity, transferring hexosyl groups | 8.43E-08 | 5 | 445 |
Module543 | 7 | 23 | GO:0071669 | biological_process | plant-type cell wall organization or biogenesis | 1.44E-07 | 4 | 110 |
Module543 | 7 | 24 | GO:0044262 | biological_process | cellular carbohydrate metabolic process | 1.46E-07 | 5 | 319 |
Module543 | 7 | 25 | GO:0016757 | molecular_function | transferase activity, transferring glycosyl groups | 3.08E-07 | 5 | 577 |
Module543 | 7 | 26 | GO:0000281 | biological_process | mitotic cytokinesis | 9.77E-07 | 3 | 42 |
Module543 | 7 | 27 | GO:0061640 | biological_process | cytoskeleton-dependent cytokinesis | 1.13E-06 | 3 | 44 |
Module543 | 7 | 28 | GO:0044723 | biological_process | single-organism carbohydrate metabolic process | 1.59E-06 | 5 | 516 |
Module543 | 7 | 29 | GO:0071554 | biological_process | cell wall organization or biogenesis | 3.75E-06 | 4 | 248 |
Module543 | 7 | 30 | GO:0000910 | biological_process | cytokinesis | 4.43E-06 | 3 | 69 |
Module543 | 7 | 31 | GO:1903047 | biological_process | mitotic cell cycle process | 6.42E-06 | 3 | 78 |
Module543 | 7 | 32 | GO:0000278 | biological_process | mitotic cell cycle | 7.75E-06 | 3 | 83 |
Module543 | 7 | 33 | GO:0005975 | biological_process | carbohydrate metabolic process | 3.28E-05 | 5 | 954 |
Module543 | 7 | 34 | GO:0008270 | molecular_function | zinc ion binding | 3.62E-05 | 5 | 1508 |
Module543 | 7 | 35 | GO:0031224 | cellular_component | intrinsic component of membrane | 4.99E-05 | 6 | 1498 |
Module543 | 7 | 36 | GO:0016740 | molecular_function | transferase activity | 6.80E-05 | 6 | 3316 |
Module543 | 7 | 37 | GO:0051301 | biological_process | cell division | 6.89E-05 | 3 | 172 |
Module543 | 7 | 38 | GO:0022402 | biological_process | cell cycle process | 8.15E-05 | 3 | 182 |
Module543 | 7 | 39 | GO:0044085 | biological_process | cellular component biogenesis | 0.000101484 | 4 | 572 |
Module543 | 7 | 40 | GO:0044711 | biological_process | single-organism biosynthetic process | 0.000119169 | 5 | 1244 |
Module543 | 7 | 41 | GO:0044425 | cellular_component | membrane part | 0.000197375 | 6 | 1895 |
Module543 | 7 | 42 | GO:0007049 | biological_process | cell cycle | 0.000213934 | 3 | 252 |
Module543 | 7 | 43 | GO:0046914 | molecular_function | transition metal ion binding | 0.000243967 | 5 | 2226 |
Module543 | 7 | 44 | GO:0042538 | biological_process | hyperosmotic salinity response | 0.000326744 | 2 | 54 |
Module543 | 7 | 45 | GO:0006972 | biological_process | hyperosmotic response | 0.00050322 | 2 | 67 |
Module543 | 7 | 46 | GO:0016021 | cellular_component | integral component of membrane | 0.000766455 | 5 | 1436 |
Module543 | 7 | 47 | GO:0009651 | biological_process | response to salt stress | 0.00136154 | 3 | 474 |
Module543 | 7 | 48 | GO:0046872 | molecular_function | metal ion binding | 0.001382445 | 5 | 3184 |
Module543 | 7 | 49 | GO:0043169 | molecular_function | cation binding | 0.001407686 | 5 | 3196 |
Module543 | 7 | 50 | GO:0006970 | biological_process | response to osmotic stress | 0.001750433 | 3 | 517 |
Module543 | 7 | 51 | GO:0009930 | cellular_component | longitudinal side of cell surface | 0.001988824 | 1 | 3 |
Module543 | 7 | 52 | GO:0043167 | molecular_function | ion binding | 0.002005628 | 6 | 5827 |
Module543 | 7 | 53 | GO:0010215 | biological_process | cellulose microfibril organization | 0.00207638 | 1 | 4 |
Module543 | 7 | 54 | GO:0071668 | biological_process | plant-type cell wall assembly | 0.002594898 | 1 | 5 |
Module543 | 7 | 55 | GO:0070726 | biological_process | cell wall assembly | 0.002594898 | 1 | 5 |
Module543 | 7 | 56 | GO:0010192 | biological_process | mucilage biosynthetic process | 0.003113184 | 1 | 6 |
Module543 | 7 | 57 | GO:0034645 | biological_process | cellular macromolecule biosynthetic process | 0.003335252 | 5 | 2507 |
Module543 | 7 | 58 | GO:0071840 | biological_process | cellular component organization or biogenesis | 0.003438496 | 4 | 1435 |
Module543 | 7 | 59 | GO:0009059 | biological_process | macromolecule biosynthetic process | 0.003466801 | 5 | 2528 |
Module543 | 7 | 60 | GO:0005794 | cellular_component | Golgi apparatus | 0.004036923 | 3 | 542 |
Module543 | 7 | 61 | GO:0005515 | molecular_function | protein binding | 0.004070887 | 5 | 3991 |
Module543 | 7 | 62 | GO:0010191 | biological_process | mucilage metabolic process | 0.004666658 | 1 | 9 |
Module543 | 7 | 63 | GO:0010214 | biological_process | seed coat development | 0.006734729 | 1 | 13 |
Module543 | 7 | 64 | GO:0009986 | cellular_component | cell surface | 0.008593772 | 1 | 13 |
Module543 | 7 | 65 | GO:0044763 | biological_process | single-organism cellular process | 0.010382349 | 6 | 4840 |
Module543 | 7 | 66 | GO:0044260 | biological_process | cellular macromolecule metabolic process | 0.011907351 | 6 | 4961 |
Module543 | 7 | 67 | GO:0030198 | biological_process | extracellular matrix organization | 0.013944001 | 1 | 27 |
Module543 | 7 | 68 | GO:0043062 | biological_process | extracellular structure organization | 0.013944001 | 1 | 27 |
Module543 | 7 | 69 | GO:0009825 | biological_process | multidimensional cell growth | 0.014457228 | 1 | 28 |
Module543 | 7 | 70 | GO:0044249 | biological_process | cellular biosynthetic process | 0.016159146 | 5 | 3546 |
Module543 | 7 | 71 | GO:1901576 | biological_process | organic substance biosynthetic process | 0.017409187 | 5 | 3606 |
Module543 | 7 | 72 | GO:0043170 | biological_process | macromolecule metabolic process | 0.020634983 | 6 | 5482 |
Module543 | 7 | 73 | GO:0009058 | biological_process | biosynthetic process | 0.020943169 | 5 | 3760 |
Module543 | 7 | 74 | GO:0003824 | molecular_function | catalytic activity | 0.02113986 | 6 | 8627 |
Module543 | 7 | 75 | GO:0044710 | biological_process | single-organism metabolic process | 0.021992024 | 5 | 3802 |
Module543 | 7 | 76 | GO:0012505 | cellular_component | endomembrane system | 0.02688248 | 3 | 1074 |
Module543 | 7 | 77 | GO:0009664 | biological_process | plant-type cell wall organization | 0.027213708 | 1 | 53 |
Module543 | 7 | 78 | GO:0009628 | biological_process | response to abiotic stimulus | 0.029899209 | 3 | 1427 |
Module543 | 7 | 79 | GO:0016020 | cellular_component | membrane | 0.034352886 | 6 | 4716 |
Module543 | 7 | 80 | GO:0031225 | cellular_component | anchored component of membrane | 0.034640305 | 1 | 53 |
Module543 | 7 | 81 | GO:0046658 | cellular_component | anchored component of plasma membrane | 0.034640305 | 1 | 53 |
Module543 | 7 | 82 | GO:0046777 | biological_process | protein autophosphorylation | 0.037819522 | 1 | 74 |
Module543 | 7 | 83 | GO:0031226 | cellular_component | intrinsic component of plasma membrane | 0.043616924 | 1 | 67 |
Gene A | Gene B | Partial correlation coefficient |
---|---|---|
cesa2 | cesa7 | 0.042 |
cesa2 | cesa1 | 0.0437 |
cesa2 | cesa4 | 0.0381 |
cesa2 | GRMZM5G826714 | 0.0414 |
cesa7 | GRMZM2G028353 | 0.0465 |
cesa7 | cesa1 | 0.0387 |
cesa7 | cesa4 | 0.0363 |
cesa7 | GRMZM5G826714 | 0.0389 |
GRMZM2G028353 | GRMZM2G162702 | 0.0387 |