Module573
This page contains information for Module573, including a list of the genes within the module, the Gene Ontology enrichement analysis results, and a heatmap showing these genes' tissue specific expression patterns. Also included is a subnetwork for the genes within the module. For this subnetwork, a SIF file (check here for details of SIF file format ) is provided for downloding, which can be opened and viewed within the Cytoscape software . Alternatively, the subnetwork can be also can be opened and visualized by clicking the link provided below.
The list of genes within the module (containing 7 genes) Click to Show / Hide Gene List
Maize Gene Symbol Moule No. Arabidopsis Homologue Arabidopsis Homologue Symbol Arabidopsis Homologue Name Arabidopsis Homologue Description Arabidopsis Homologue TF_Family
GRMZM2G058310 amyb5 Module573 AT4G15210 BAM5 beta-amylase 5 beta-amylase 5
GRMZM2G152975 Module573 AT1G64710 AT1G64710 GroES-like zinc-binding dehydrogenase family protein
GRMZM2G160430 Module573 AT1G75220 ERDL6 ERD6-like 6 Major facilitator superfamily protein
GRMZM2G165597 Module573 AT1G06840 AT1G06840 Leucine-rich repeat protein kinase family protein
AC191283.3_FG004 Module573 AT1G06840 AT1G06840 Leucine-rich repeat protein kinase family protein
GRMZM2G358467 Module573
GRMZM5G812228 Module573 AT4G23850 LACS4 long-chain acyl-CoA synthetase 4 AMP-dependent synthetase and ligase family protein
Gene Ontology enrichment analysis Click to Show / Hide Results
Module No. Number of genes within the module GO_Rank GO ID GO catogery GO term pValue Number of genes with the GO within the module Number of genes with the GO within the genome (background set)
Module573 7 1 GO:0080027 biological_process response to herbivore 0.002594898 1 7
Module573 7 2 GO:0016161 molecular_function beta-amylase activity 0.004564257 1 15
Module573 7 3 GO:0005983 biological_process starch catabolic process 0.006292547 1 17
Module573 7 4 GO:0016160 molecular_function amylase activity 0.006688533 1 22
Module573 7 5 GO:0009251 biological_process glucan catabolic process 0.00703076 1 19
Module573 7 6 GO:0044247 biological_process cellular polysaccharide catabolic process 0.00703076 1 19
Module573 7 7 GO:0044275 biological_process cellular carbohydrate catabolic process 0.011083088 1 30
Module573 7 8 GO:0000272 biological_process polysaccharide catabolic process 0.016953757 1 46
Module573 7 9 GO:0005982 biological_process starch metabolic process 0.018782612 1 51
Module573 7 10 GO:0005886 cellular_component plasma membrane 0.03790544 2 2055
A development heatmap for the genes within the module (showing these genes' tissue-specific expression patterns)Click to Download the Heatmap
A subnetwork extracted for the genes witin module
All gene pairs of the subnetwork Click to Show / Hide Gene Pairs
Gene A Gene B Partial correlation coefficient
amyb5 GRMZM2G152975 0.0402
amyb5 GRMZM2G160430 0.0354
amyb5 GRMZM2G165597 0.0381
amyb5 GRMZM2G358467 0.0912
GRMZM2G165597 AC191283.3_FG004 0.0706
GRMZM2G165597 GRMZM5G812228 0.0415
A sif file of the subnetwork (This file conains the information of the subnetwork, which be opened using Cytoscape to produce a visualization of the subenetwork.)Click to Download the SIF file
Visualization of the subnetwork Click to Visualize the Subnetwork