Module611
This page contains information for Module611, including a list of the genes within the module, the Gene Ontology enrichement analysis results, and a heatmap showing these genes' tissue specific expression patterns. Also included is a subnetwork for the genes within the module. For this subnetwork, a SIF file (check here for details of SIF file format ) is provided for downloding, which can be opened and viewed within the Cytoscape software . Alternatively, the subnetwork can be also can be opened and visualized by clicking the link provided below.
The list of genes within the module (containing 7 genes) Click to Show / Hide Gene List
Maize Gene Symbol Moule No. Arabidopsis Homologue Arabidopsis Homologue Symbol Arabidopsis Homologue Name Arabidopsis Homologue Description Arabidopsis Homologue TF_Family
GRMZM2G108807 Module611 AT2G31200 ADF6 actin depolymerizing factor 6 actin depolymerizing factor 6
GRMZM2G108833 Module611 AT2G31200 ADF6 actin depolymerizing factor 6 actin depolymerizing factor 6
GRMZM2G143332 Module611 AT2G31200 ADF6 actin depolymerizing factor 6 actin depolymerizing factor 6
GRMZM2G151468 Module611 AT5G18670 BMY3 beta-amylase 3 beta-amylase 3
GRMZM2G161854 Module611 AT1G20910 AT1G20910 ARID/BRIGHT DNA-binding domain-containing protein ARID
GRMZM2G172686 Module611 AT2G26070 RTE1 REVERSION-TO-ETHYLENE SENSITIVITY1 Protein of unknown function (DUF778)
GRMZM2G568484 Module611
Gene Ontology enrichment analysis Click to Show / Hide Results
Module No. Number of genes within the module GO_Rank GO ID GO catogery GO term pValue Number of genes with the GO within the module Number of genes with the GO within the genome (background set)
Module611 7 1 GO:0003779 molecular_function actin binding 7.03E-07 3 93
Module611 7 2 GO:0008092 molecular_function cytoskeletal protein binding 2.12E-06 3 134
Module611 7 3 GO:0000272 biological_process polysaccharide catabolic process 0.003413476 1 46
Module611 7 4 GO:0016161 molecular_function beta-amylase activity 0.003652964 1 15
Module611 7 5 GO:0016160 molecular_function amylase activity 0.005354252 1 22
Module611 7 6 GO:0016052 biological_process carbohydrate catabolic process 0.010463045 1 141
Module611 7 7 GO:0005976 biological_process polysaccharide metabolic process 0.017586821 1 237
Module611 7 8 GO:0009057 biological_process macromolecule catabolic process 0.024265361 1 327
Module611 7 9 GO:1901575 biological_process organic substance catabolic process 0.044672009 1 602
Module611 7 10 GO:0005515 molecular_function protein binding 0.047072498 3 3991
Module611 7 11 GO:0009056 biological_process catabolic process 0.048233897 1 650
A development heatmap for the genes within the module (showing these genes' tissue-specific expression patterns)Click to Download the Heatmap
A subnetwork extracted for the genes witin module
All gene pairs of the subnetwork Click to Show / Hide Gene Pairs
Gene A Gene B Partial correlation coefficient
GRMZM2G108807 GRMZM2G108833 0.1697
GRMZM2G108807 GRMZM2G143332 0.104
GRMZM2G108807 GRMZM2G151468 0.0397
GRMZM2G108807 GRMZM2G172686 0.0547
GRMZM2G108807 GRMZM2G568484 0.1099
GRMZM2G108833 GRMZM2G143332 0.1109
GRMZM2G108833 GRMZM2G151468 0.0526
GRMZM2G108833 GRMZM2G161854 0.039
GRMZM2G108833 GRMZM2G172686 0.0403
GRMZM2G108833 GRMZM2G568484 0.0904
GRMZM2G143332 GRMZM2G151468 0.0592
GRMZM2G143332 GRMZM2G172686 0.0492
GRMZM2G143332 GRMZM2G568484 0.0549
GRMZM2G161854 GRMZM2G172686 0.0398
A sif file of the subnetwork (This file conains the information of the subnetwork, which be opened using Cytoscape to produce a visualization of the subenetwork.)Click to Download the SIF file
Visualization of the subnetwork Click to Visualize the Subnetwork