This page contains information for Module621, including a list of the genes within the module, the Gene Ontology enrichement analysis results, and a heatmap showing these genes' tissue specific expression patterns. Also included is a subnetwork for the genes within the module. For this subnetwork, a SIF file (check here for details of SIF file format) is provided for downloding, which can be opened and viewed within the Cytoscape software. Alternatively, the subnetwork can be also can be opened and visualized by clicking the link provided below.
Maize Gene | Symbol | Moule No. | Arabidopsis Homologue | Arabidopsis Homologue Symbol | Arabidopsis Homologue Name | Arabidopsis Homologue Description | Arabidopsis Homologue TF_Family |
---|---|---|---|---|---|---|---|
GRMZM2G154344 | Module621 | AT3G01130 | AT3G01130 | ||||
GRMZM2G125452 | Module621 | AT5G15320 | AT5G15320 | ||||
GRMZM2G163468 | Module621 | AT3G08610 | AT3G08610 | ||||
GRMZM2G056606 | Module621 | AT4G00585 | AT4G00585 | ||||
GRMZM2G313672 | Module621 | AT4G20150 | AT4G20150 | ||||
GRMZM5G809335 | Module621 | ||||||
GRMZM2G152808 | Module621 |
Module No. | Number of genes within the module | GO_Rank | GO ID | GO catogery | GO term | pValue | Number of genes with the GO within the module | Number of genes with the GO within the genome (background set) |
---|---|---|---|---|---|---|---|---|
Module621 | 7 | 1 | GO:0098800 | cellular_component | inner mitochondrial membrane protein complex | 1.61E-10 | 5 | 118 |
Module621 | 7 | 2 | GO:0098798 | cellular_component | mitochondrial protein complex | 2.24E-10 | 5 | 126 |
Module621 | 7 | 3 | GO:0044455 | cellular_component | mitochondrial membrane part | 4.73E-10 | 5 | 146 |
Module621 | 7 | 4 | GO:0005743 | cellular_component | mitochondrial inner membrane | 8.27E-10 | 5 | 163 |
Module621 | 7 | 5 | GO:0031966 | cellular_component | mitochondrial membrane | 2.05E-09 | 5 | 195 |
Module621 | 7 | 6 | GO:0019866 | cellular_component | organelle inner membrane | 2.91E-09 | 5 | 209 |
Module621 | 7 | 7 | GO:0005740 | cellular_component | mitochondrial envelope | 3.12E-09 | 5 | 212 |
Module621 | 7 | 8 | GO:0044429 | cellular_component | mitochondrial part | 8.57E-09 | 5 | 259 |
Module621 | 7 | 9 | GO:0098796 | cellular_component | membrane protein complex | 9.08E-08 | 5 | 414 |
Module621 | 7 | 10 | GO:0005747 | cellular_component | mitochondrial respiratory chain complex I | 1.65E-06 | 3 | 59 |
Module621 | 7 | 11 | GO:0030964 | cellular_component | NADH dehydrogenase complex | 2.21E-06 | 3 | 65 |
Module621 | 7 | 12 | GO:0045271 | cellular_component | respiratory chain complex I | 2.21E-06 | 3 | 65 |
Module621 | 7 | 13 | GO:0031090 | cellular_component | organelle membrane | 2.91E-06 | 5 | 826 |
Module621 | 7 | 14 | GO:0031967 | cellular_component | organelle envelope | 3.24E-06 | 5 | 844 |
Module621 | 7 | 15 | GO:0031975 | cellular_component | envelope | 3.41E-06 | 5 | 853 |
Module621 | 7 | 16 | GO:0005739 | cellular_component | mitochondrion | 4.88E-06 | 5 | 916 |
Module621 | 7 | 17 | GO:0005746 | cellular_component | mitochondrial respiratory chain | 6.54E-06 | 3 | 93 |
Module621 | 7 | 18 | GO:0098803 | cellular_component | respiratory chain complex | 6.54E-06 | 3 | 93 |
Module621 | 7 | 19 | GO:0000276 | cellular_component | mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) | 8.07E-06 | 2 | 10 |
Module621 | 7 | 20 | GO:0015985 | biological_process | energy coupled proton transport, down electrochemical gradient | 8.16E-06 | 2 | 39 |
Module621 | 7 | 21 | GO:0015986 | biological_process | ATP synthesis coupled proton transport | 8.16E-06 | 2 | 39 |
Module621 | 7 | 22 | GO:0070469 | cellular_component | respiratory chain | 1.09E-05 | 3 | 110 |
Module621 | 7 | 23 | GO:0006754 | biological_process | ATP biosynthetic process | 1.35E-05 | 2 | 50 |
Module621 | 7 | 24 | GO:1990204 | cellular_component | oxidoreductase complex | 1.88E-05 | 3 | 132 |
Module621 | 7 | 25 | GO:0045263 | cellular_component | proton-transporting ATP synthase complex, coupling factor F(o) | 1.88E-05 | 2 | 15 |
Module621 | 7 | 26 | GO:0009145 | biological_process | purine nucleoside triphosphate biosynthetic process | 1.88E-05 | 2 | 59 |
Module621 | 7 | 27 | GO:0009206 | biological_process | purine ribonucleoside triphosphate biosynthetic process | 1.88E-05 | 2 | 59 |
Module621 | 7 | 28 | GO:0009201 | biological_process | ribonucleoside triphosphate biosynthetic process | 2.02E-05 | 2 | 61 |
Module621 | 7 | 29 | GO:0009142 | biological_process | nucleoside triphosphate biosynthetic process | 2.15E-05 | 2 | 63 |
Module621 | 7 | 30 | GO:0043234 | cellular_component | protein complex | 2.64E-05 | 5 | 1283 |
Module621 | 7 | 31 | GO:0009168 | biological_process | purine ribonucleoside monophosphate biosynthetic process | 2.66E-05 | 2 | 70 |
Module621 | 7 | 32 | GO:0009127 | biological_process | purine nucleoside monophosphate biosynthetic process | 2.66E-05 | 2 | 70 |
Module621 | 7 | 33 | GO:1902600 | biological_process | hydrogen ion transmembrane transport | 3.06E-05 | 2 | 75 |
Module621 | 7 | 34 | GO:0009156 | biological_process | ribonucleoside monophosphate biosynthetic process | 3.39E-05 | 2 | 79 |
Module621 | 7 | 35 | GO:0009124 | biological_process | nucleoside monophosphate biosynthetic process | 3.66E-05 | 2 | 82 |
Module621 | 7 | 36 | GO:0046129 | biological_process | purine ribonucleoside biosynthetic process | 4.03E-05 | 2 | 86 |
Module621 | 7 | 37 | GO:0042451 | biological_process | purine nucleoside biosynthetic process | 4.03E-05 | 2 | 86 |
Module621 | 7 | 38 | GO:0009152 | biological_process | purine ribonucleotide biosynthetic process | 4.51E-05 | 2 | 91 |
Module621 | 7 | 39 | GO:0005753 | cellular_component | mitochondrial proton-transporting ATP synthase complex | 4.53E-05 | 2 | 23 |
Module621 | 7 | 40 | GO:0006164 | biological_process | purine nucleotide biosynthetic process | 4.92E-05 | 2 | 95 |
Module621 | 7 | 41 | GO:0042455 | biological_process | ribonucleoside biosynthetic process | 5.13E-05 | 2 | 97 |
Module621 | 7 | 42 | GO:0009163 | biological_process | nucleoside biosynthetic process | 5.13E-05 | 2 | 97 |
Module621 | 7 | 43 | GO:0006818 | biological_process | hydrogen transport | 5.13E-05 | 2 | 97 |
Module621 | 7 | 44 | GO:0015992 | biological_process | proton transport | 5.13E-05 | 2 | 97 |
Module621 | 7 | 45 | GO:0009260 | biological_process | ribonucleotide biosynthetic process | 5.56E-05 | 2 | 101 |
Module621 | 7 | 46 | GO:0046390 | biological_process | ribose phosphate biosynthetic process | 5.56E-05 | 2 | 101 |
Module621 | 7 | 47 | GO:1901659 | biological_process | glycosyl compound biosynthetic process | 6.72E-05 | 2 | 111 |
Module621 | 7 | 48 | GO:0072522 | biological_process | purine-containing compound biosynthetic process | 6.97E-05 | 2 | 113 |
Module621 | 7 | 49 | GO:0015078 | molecular_function | hydrogen ion transmembrane transporter activity | 7.44E-05 | 2 | 142 |
Module621 | 7 | 50 | GO:0033177 | cellular_component | proton-transporting two-sector ATPase complex, proton-transporting domain | 0.000100149 | 2 | 34 |
Module621 | 7 | 51 | GO:0009165 | biological_process | nucleotide biosynthetic process | 0.000104114 | 2 | 138 |
Module621 | 7 | 52 | GO:1901293 | biological_process | nucleoside phosphate biosynthetic process | 0.00011026 | 2 | 142 |
Module621 | 7 | 53 | GO:0045259 | cellular_component | proton-transporting ATP synthase complex | 0.000132157 | 2 | 39 |
Module621 | 7 | 54 | GO:0015077 | molecular_function | monovalent inorganic cation transmembrane transporter activity | 0.000149401 | 2 | 201 |
Module621 | 7 | 55 | GO:0046034 | biological_process | ATP metabolic process | 0.000163864 | 2 | 173 |
Module621 | 7 | 56 | GO:0098662 | biological_process | inorganic cation transmembrane transport | 0.000173502 | 2 | 178 |
Module621 | 7 | 57 | GO:0098655 | biological_process | cation transmembrane transport | 0.000175462 | 2 | 179 |
Module621 | 7 | 58 | GO:0015672 | biological_process | monovalent inorganic cation transport | 0.000177434 | 2 | 180 |
Module621 | 7 | 59 | GO:0009144 | biological_process | purine nucleoside triphosphate metabolic process | 0.00018141 | 2 | 182 |
Module621 | 7 | 60 | GO:0009205 | biological_process | purine ribonucleoside triphosphate metabolic process | 0.00018141 | 2 | 182 |
Module621 | 7 | 61 | GO:0009199 | biological_process | ribonucleoside triphosphate metabolic process | 0.00018543 | 2 | 184 |
Module621 | 7 | 62 | GO:0044425 | cellular_component | membrane part | 0.000185902 | 5 | 1895 |
Module621 | 7 | 63 | GO:0098660 | biological_process | inorganic ion transmembrane transport | 0.000187456 | 2 | 185 |
Module621 | 7 | 64 | GO:0009141 | biological_process | nucleoside triphosphate metabolic process | 0.000191542 | 2 | 187 |
Module621 | 7 | 65 | GO:0009167 | biological_process | purine ribonucleoside monophosphate metabolic process | 0.000204065 | 2 | 193 |
Module621 | 7 | 66 | GO:0009126 | biological_process | purine nucleoside monophosphate metabolic process | 0.000204065 | 2 | 193 |
Module621 | 7 | 67 | GO:0009161 | biological_process | ribonucleoside monophosphate metabolic process | 0.000223593 | 2 | 202 |
Module621 | 7 | 68 | GO:0009123 | biological_process | nucleoside monophosphate metabolic process | 0.0002303 | 2 | 205 |
Module621 | 7 | 69 | GO:0032991 | cellular_component | macromolecular complex | 0.00023391 | 5 | 1984 |
Module621 | 7 | 70 | GO:0009150 | biological_process | purine ribonucleotide metabolic process | 0.000287528 | 2 | 229 |
Module621 | 7 | 71 | GO:0046128 | biological_process | purine ribonucleoside metabolic process | 0.00029005 | 2 | 230 |
Module621 | 7 | 72 | GO:0042278 | biological_process | purine nucleoside metabolic process | 0.000292584 | 2 | 231 |
Module621 | 7 | 73 | GO:0022890 | molecular_function | inorganic cation transmembrane transporter activity | 0.000296594 | 2 | 283 |
Module621 | 7 | 74 | GO:0006163 | biological_process | purine nucleotide metabolic process | 0.000310624 | 2 | 238 |
Module621 | 7 | 75 | GO:0034220 | biological_process | ion transmembrane transport | 0.000313246 | 2 | 239 |
Module621 | 7 | 76 | GO:0009259 | biological_process | ribonucleotide metabolic process | 0.000313246 | 2 | 239 |
Module621 | 7 | 77 | GO:0090407 | biological_process | organophosphate biosynthetic process | 0.000323841 | 2 | 243 |
Module621 | 7 | 78 | GO:0009119 | biological_process | ribonucleoside metabolic process | 0.000334613 | 2 | 247 |
Module621 | 7 | 79 | GO:0009116 | biological_process | nucleoside metabolic process | 0.000379461 | 2 | 263 |
Module621 | 7 | 80 | GO:0019693 | biological_process | ribose phosphate metabolic process | 0.000397006 | 2 | 269 |
Module621 | 7 | 81 | GO:0072521 | biological_process | purine-containing compound metabolic process | 0.000399969 | 2 | 270 |
Module621 | 7 | 82 | GO:1901137 | biological_process | carbohydrate derivative biosynthetic process | 0.000417977 | 2 | 276 |
Module621 | 7 | 83 | GO:1901657 | biological_process | glycosyl compound metabolic process | 0.000442604 | 2 | 284 |
Module621 | 7 | 84 | GO:0008324 | molecular_function | cation transmembrane transporter activity | 0.000507405 | 2 | 370 |
Module621 | 7 | 85 | GO:0016469 | cellular_component | proton-transporting two-sector ATPase complex | 0.000518093 | 2 | 77 |
Module621 | 7 | 86 | GO:0009117 | biological_process | nucleotide metabolic process | 0.000597888 | 2 | 330 |
Module621 | 7 | 87 | GO:0006753 | biological_process | nucleoside phosphate metabolic process | 0.000627273 | 2 | 338 |
Module621 | 7 | 88 | GO:1902494 | cellular_component | catalytic complex | 0.000636191 | 3 | 431 |
Module621 | 7 | 89 | GO:0055086 | biological_process | nucleobase-containing small molecule metabolic process | 0.000818386 | 2 | 386 |
Module621 | 7 | 90 | GO:0015075 | molecular_function | ion transmembrane transporter activity | 0.000942162 | 2 | 504 |
Module621 | 7 | 91 | GO:0006812 | biological_process | cation transport | 0.001147602 | 2 | 457 |
Module621 | 7 | 92 | GO:0022891 | molecular_function | substrate-specific transmembrane transporter activity | 0.001449411 | 2 | 625 |
Module621 | 7 | 93 | GO:1901135 | biological_process | carbohydrate derivative metabolic process | 0.00149194 | 2 | 521 |
Module621 | 7 | 94 | GO:0019637 | biological_process | organophosphate metabolic process | 0.00160285 | 2 | 540 |
Module621 | 7 | 95 | GO:0022892 | molecular_function | substrate-specific transporter activity | 0.00180807 | 2 | 698 |
Module621 | 7 | 96 | GO:0044446 | cellular_component | intracellular organelle part | 0.002028456 | 5 | 3055 |
Module621 | 7 | 97 | GO:0044422 | cellular_component | organelle part | 0.002045121 | 5 | 3060 |
Module621 | 7 | 98 | GO:0022857 | molecular_function | transmembrane transporter activity | 0.002104456 | 2 | 753 |
Module621 | 7 | 99 | GO:0006811 | biological_process | ion transport | 0.002175307 | 2 | 629 |
Module621 | 7 | 100 | GO:0055085 | biological_process | transmembrane transport | 0.003227011 | 2 | 766 |
Module621 | 7 | 101 | GO:0005215 | molecular_function | transporter activity | 0.003414374 | 2 | 959 |
Module621 | 7 | 102 | GO:0044711 | biological_process | single-organism biosynthetic process | 0.008515335 | 2 | 1244 |
Module621 | 7 | 103 | GO:1901566 | biological_process | organonitrogen compound biosynthetic process | 0.009515494 | 2 | 1315 |
Module621 | 7 | 104 | GO:0044765 | biological_process | single-organism transport | 0.011379571 | 2 | 1438 |
Module621 | 7 | 105 | GO:1902578 | biological_process | single-organism localization | 0.011827197 | 2 | 1466 |
Module621 | 7 | 106 | GO:0044281 | biological_process | small molecule metabolic process | 0.01208686 | 2 | 1482 |
Module621 | 7 | 107 | GO:0034654 | biological_process | nucleobase-containing compound biosynthetic process | 0.01407134 | 2 | 1599 |
Module621 | 7 | 108 | GO:1901564 | biological_process | organonitrogen compound metabolic process | 0.017418788 | 2 | 1779 |
Module621 | 7 | 109 | GO:0016020 | cellular_component | membrane | 0.017802447 | 5 | 4716 |
Module621 | 7 | 110 | GO:0018130 | biological_process | heterocycle biosynthetic process | 0.017911934 | 2 | 1804 |
Module621 | 7 | 111 | GO:0019438 | biological_process | aromatic compound biosynthetic process | 0.018171091 | 2 | 1817 |
Module621 | 7 | 112 | GO:0006810 | biological_process | transport | 0.020269069 | 2 | 1919 |
Module621 | 7 | 113 | GO:1901362 | biological_process | organic cyclic compound biosynthetic process | 0.020374857 | 2 | 1924 |
Module621 | 7 | 114 | GO:0051234 | biological_process | establishment of localization | 0.020502167 | 2 | 1930 |
Module621 | 7 | 115 | GO:0051179 | biological_process | localization | 0.021513141 | 2 | 1977 |
Module621 | 7 | 116 | GO:0006796 | biological_process | phosphate-containing compound metabolic process | 0.021797068 | 2 | 1990 |
Module621 | 7 | 117 | GO:0006793 | biological_process | phosphorus metabolic process | 0.022060807 | 2 | 2002 |
Module621 | 7 | 118 | GO:0044271 | biological_process | cellular nitrogen compound biosynthetic process | 0.03512408 | 2 | 2526 |
Module621 | 7 | 119 | GO:0044444 | cellular_component | cytoplasmic part | 0.035441995 | 5 | 5412 |
Module621 | 7 | 120 | GO:0006139 | biological_process | nucleobase-containing compound metabolic process | 0.037126744 | 2 | 2597 |
Module621 | 7 | 121 | GO:0046483 | biological_process | heterocycle metabolic process | 0.045217967 | 2 | 2866 |
Module621 | 7 | 122 | GO:0006725 | biological_process | cellular aromatic compound metabolic process | 0.046585241 | 2 | 2909 |
Module621 | 7 | 123 | GO:1901360 | biological_process | organic cyclic compound metabolic process | 0.049512895 | 2 | 2999 |
Gene A | Gene B | Partial correlation coefficient |
---|---|---|
GRMZM2G154344 | GRMZM2G125452 | 0.0556 |
GRMZM2G154344 | GRMZM2G163468 | 0.0476 |
GRMZM2G154344 | GRMZM2G313672 | 0.0411 |
GRMZM2G154344 | GRMZM5G809335 | 0.0417 |
GRMZM2G125452 | GRMZM5G809335 | 0.0405 |
GRMZM2G163468 | GRMZM2G056606 | 0.0387 |
GRMZM2G163468 | GRMZM5G809335 | 0.0352 |
GRMZM5G809335 | GRMZM2G152808 | 0.0477 |