Module638
This page contains information for Module638, including a list of the genes within the module, the Gene Ontology enrichement analysis results, and a heatmap showing these genes' tissue specific expression patterns. Also included is a subnetwork for the genes within the module. For this subnetwork, a SIF file (check here for details of SIF file format ) is provided for downloding, which can be opened and viewed within the Cytoscape software . Alternatively, the subnetwork can be also can be opened and visualized by clicking the link provided below.
The list of genes within the module (containing 6 genes) Click to Show / Hide Gene List
Maize Gene Symbol Moule No. Arabidopsis Homologue Arabidopsis Homologue Symbol Arabidopsis Homologue Name Arabidopsis Homologue Description Arabidopsis Homologue TF_Family
AC205471.4_FG008 Module638 AT2G42800 RLP29 receptor like protein 29 receptor like protein 29
AC204763.2_FG001 Module638 AT2G42800 RLP29 receptor like protein 29 receptor like protein 29
GRMZM2G011463 Module638 AT5G20820 AT5G20820 SAUR-like auxin-responsive protein family
GRMZM2G086474 bhlh134 Module638 AT1G72210 AT1G72210 basic helix-loop-helix (bHLH) DNA-binding superfamily protein bHLH
GRMZM2G169973 ofp13 Module638 AT2G18500 OFP7 ovate family protein 7 ovate family protein 7 OFP
GRMZM2G308440 Module638
Gene Ontology enrichment analysis Click to Show / Hide Results
Module No. Number of genes within the module GO_Rank GO ID GO catogery GO term pValue Number of genes with the GO within the module Number of genes with the GO within the genome (background set)
Module638 6 1 GO:0009734 biological_process auxin-activated signaling pathway 0.008682102 1 117
Module638 6 2 GO:0071365 biological_process cellular response to auxin stimulus 0.009053131 1 122
Module638 6 3 GO:0005515 molecular_function protein binding 0.014392917 3 3991
Module638 6 4 GO:0005516 molecular_function calmodulin binding 0.015465517 1 85
Module638 6 5 GO:0009733 biological_process response to auxin 0.016993173 1 229
Module638 6 6 GO:0009755 biological_process hormone-mediated signaling pathway 0.021519739 1 290
Module638 6 7 GO:0032870 biological_process cellular response to hormone stimulus 0.023449095 1 316
Module638 6 8 GO:0071495 biological_process cellular response to endogenous stimulus 0.023820125 1 321
Module638 6 9 GO:0071310 biological_process cellular response to organic substance 0.028420896 1 383
Module638 6 10 GO:0070887 biological_process cellular response to chemical stimulus 0.033392698 1 450
Module638 6 11 GO:0009505 cellular_component plant-type cell wall 0.041447204 1 221
A development heatmap for the genes within the module (showing these genes' tissue-specific expression patterns)Click to Download the Heatmap
A subnetwork extracted for the genes witin module
All gene pairs of the subnetwork Click to Show / Hide Gene Pairs
Gene A Gene B Partial correlation coefficient
AC205471.4_FG008 AC204763.2_FG001 0.0931
AC205471.4_FG008 bhlh134 0.0416
AC205471.4_FG008 ofp13 0.0454
AC205471.4_FG008 GRMZM2G308440 0.0781
AC204763.2_FG001 bhlh134 0.0364
AC204763.2_FG001 ofp13 0.0408
AC204763.2_FG001 GRMZM2G308440 0.0384
GRMZM2G011463 GRMZM2G308440 0.0401
ofp13 GRMZM2G308440 0.0361
A sif file of the subnetwork (This file conains the information of the subnetwork, which be opened using Cytoscape to produce a visualization of the subenetwork.)Click to Download the SIF file
Visualization of the subnetwork Click to Visualize the Subnetwork