Module659
This page contains information for Module659, including a list of the genes within the module, the Gene Ontology enrichement analysis results, and a heatmap showing these genes' tissue specific expression patterns. Also included is a subnetwork for the genes within the module. For this subnetwork, a SIF file (check here for details of SIF file format ) is provided for downloding, which can be opened and viewed within the Cytoscape software . Alternatively, the subnetwork can be also can be opened and visualized by clicking the link provided below.
The list of genes within the module (containing 6 genes) Click to Show / Hide Gene List
Maize Gene Symbol Moule No. Arabidopsis Homologue Arabidopsis Homologue Symbol Arabidopsis Homologue Name Arabidopsis Homologue Description Arabidopsis Homologue TF_Family
GRMZM2G018813 Module659 AT5G45890 SAG12 senescence-associated gene 12 senescence-associated gene 12
GRMZM2G045706 Module659 AT5G45890 SAG12 senescence-associated gene 12 senescence-associated gene 12
GRMZM2G070761 Module659 AT5G45890 SAG12 senescence-associated gene 12 senescence-associated gene 12
GRMZM2G087728 Module659 AT5G45890 SAG12 senescence-associated gene 12 senescence-associated gene 12
GRMZM2G383883 Module659 AT5G62950 AT5G62950 RNA polymerase II, Rpb4, core protein
GRMZM2G426922 Module659 AT1G80310 MOT2 molybdate transporter 2 sulfate transmembrane transporters
Gene Ontology enrichment analysis Click to Show / Hide Results
Module No. Number of genes within the module GO_Rank GO ID GO catogery GO term pValue Number of genes with the GO within the module Number of genes with the GO within the genome (background set)
Module659 6 1 GO:0008234 molecular_function cysteine-type peptidase activity 0.000105572 2 98
Module659 6 2 GO:0070011 molecular_function peptidase activity, acting on L-amino acid peptides 0.002747089 2 502
Module659 6 3 GO:0008233 molecular_function peptidase activity 0.003209157 2 543
Module659 6 4 GO:0006508 biological_process proteolysis 0.007479079 2 685
Module659 6 5 GO:0003899 molecular_function DNA-directed RNA polymerase activity 0.013291886 1 73
Module659 6 6 GO:0034062 molecular_function RNA polymerase activity 0.014197954 1 78
Module659 6 7 GO:0016779 molecular_function nucleotidyltransferase activity 0.034706098 1 192
A development heatmap for the genes within the module (showing these genes' tissue-specific expression patterns)Click to Download the Heatmap
A subnetwork extracted for the genes witin module
All gene pairs of the subnetwork Click to Show / Hide Gene Pairs
Gene A Gene B Partial correlation coefficient
GRMZM2G018813 GRMZM2G045706 0.0458
GRMZM2G018813 GRMZM2G070761 0.1407
GRMZM2G018813 GRMZM2G087728 0.0625
GRMZM2G018813 GRMZM2G426922 0.0466
GRMZM2G045706 GRMZM2G070761 0.0552
GRMZM2G045706 GRMZM2G087728 0.0416
GRMZM2G070761 GRMZM2G087728 0.0604
GRMZM2G383883 GRMZM2G426922 0.0415
A sif file of the subnetwork (This file conains the information of the subnetwork, which be opened using Cytoscape to produce a visualization of the subenetwork.)Click to Download the SIF file
Visualization of the subnetwork Click to Visualize the Subnetwork