This page contains information for Module680, including a list of the genes within the module, the Gene Ontology enrichement analysis results, and a heatmap showing these genes' tissue specific expression patterns. Also included is a subnetwork for the genes within the module. For this subnetwork, a SIF file (check here for details of SIF file format) is provided for downloding, which can be opened and viewed within the Cytoscape software. Alternatively, the subnetwork can be also can be opened and visualized by clicking the link provided below.
Maize Gene | Symbol | Moule No. | Arabidopsis Homologue | Arabidopsis Homologue Symbol | Arabidopsis Homologue Name | Arabidopsis Homologue Description | Arabidopsis Homologue TF_Family |
---|---|---|---|---|---|---|---|
GRMZM2G037177 | Module680 | AT1G47260 | GAMMA CA2 | gamma carbonic anhydrase 2 | gamma carbonic anhydrase 2 | ||
GRMZM2G067417 | Module680 | AT4G28060 | AT4G28060 | Cytochrome c oxidase, subunit Vib family protein | |||
GRMZM2G150616 | vdac1a | Module680 | AT3G01280 | VDAC1 | voltage dependent anion channel 1 | voltage dependent anion channel 1 | |
GRMZM2G146670 | vdac1b | Module680 | AT3G01280 | VDAC1 | voltage dependent anion channel 1 | voltage dependent anion channel 1 | |
GRMZM2G158479 | Module680 | AT3G27240 | AT3G27240 | Cytochrome C1 family | |||
GRMZM2G704150 | Module680 | AT1G72170 | AT1G72170 | Domain of unknown function (DUF543) |
Module No. | Number of genes within the module | GO_Rank | GO ID | GO catogery | GO term | pValue | Number of genes with the GO within the module | Number of genes with the GO within the genome (background set) |
---|---|---|---|---|---|---|---|---|
Module680 | 6 | 1 | GO:0005739 | cellular_component | mitochondrion | 4.21E-07 | 6 | 916 |
Module680 | 6 | 2 | GO:0031966 | cellular_component | mitochondrial membrane | 1.65E-06 | 4 | 195 |
Module680 | 6 | 3 | GO:0005740 | cellular_component | mitochondrial envelope | 2.30E-06 | 4 | 212 |
Module680 | 6 | 4 | GO:0044429 | cellular_component | mitochondrial part | 5.12E-06 | 4 | 259 |
Module680 | 6 | 5 | GO:0044070 | biological_process | regulation of anion transport | 5.65E-06 | 2 | 19 |
Module680 | 6 | 6 | GO:0043269 | biological_process | regulation of ion transport | 1.25E-05 | 2 | 28 |
Module680 | 6 | 7 | GO:0008308 | molecular_function | voltage-gated anion channel activity | 1.71E-05 | 2 | 22 |
Module680 | 6 | 8 | GO:0005253 | molecular_function | anion channel activity | 1.88E-05 | 2 | 23 |
Module680 | 6 | 9 | GO:0051049 | biological_process | regulation of transport | 2.84E-05 | 2 | 42 |
Module680 | 6 | 10 | GO:0032879 | biological_process | regulation of localization | 3.41E-05 | 2 | 46 |
Module680 | 6 | 11 | GO:0005244 | molecular_function | voltage-gated ion channel activity | 3.91E-05 | 2 | 33 |
Module680 | 6 | 12 | GO:0022832 | molecular_function | voltage-gated channel activity | 3.91E-05 | 2 | 33 |
Module680 | 6 | 13 | GO:0022836 | molecular_function | gated channel activity | 7.32E-05 | 2 | 45 |
Module680 | 6 | 14 | GO:0005216 | molecular_function | ion channel activity | 0.00013953 | 2 | 62 |
Module680 | 6 | 15 | GO:0005741 | cellular_component | mitochondrial outer membrane | 0.000177844 | 2 | 37 |
Module680 | 6 | 16 | GO:0022838 | molecular_function | substrate-specific channel activity | 0.00019365 | 2 | 73 |
Module680 | 6 | 17 | GO:0022803 | molecular_function | passive transmembrane transporter activity | 0.00019365 | 2 | 73 |
Module680 | 6 | 18 | GO:0015267 | molecular_function | channel activity | 0.00019365 | 2 | 73 |
Module680 | 6 | 19 | GO:0015075 | molecular_function | ion transmembrane transporter activity | 0.000275307 | 3 | 504 |
Module680 | 6 | 20 | GO:0070206 | biological_process | protein trimerization | 0.000445203 | 1 | 2 |
Module680 | 6 | 21 | GO:0031968 | cellular_component | organelle outer membrane | 0.00048571 | 2 | 61 |
Module680 | 6 | 22 | GO:0031090 | cellular_component | organelle membrane | 0.000491775 | 4 | 826 |
Module680 | 6 | 23 | GO:0022891 | molecular_function | substrate-specific transmembrane transporter activity | 0.000519689 | 3 | 625 |
Module680 | 6 | 24 | GO:0031967 | cellular_component | organelle envelope | 0.000534591 | 4 | 844 |
Module680 | 6 | 25 | GO:0031975 | cellular_component | envelope | 0.000556992 | 4 | 853 |
Module680 | 6 | 26 | GO:0006820 | biological_process | anion transport | 0.000563306 | 2 | 186 |
Module680 | 6 | 27 | GO:0008509 | molecular_function | anion transmembrane transporter activity | 0.000585691 | 2 | 127 |
Module680 | 6 | 28 | GO:0019867 | cellular_component | outer membrane | 0.000585942 | 2 | 67 |
Module680 | 6 | 29 | GO:0022892 | molecular_function | substrate-specific transporter activity | 0.000719291 | 3 | 698 |
Module680 | 6 | 30 | GO:0022857 | molecular_function | transmembrane transporter activity | 0.000898682 | 3 | 753 |
Module680 | 6 | 31 | GO:0042742 | biological_process | defense response to bacterium | 0.00097574 | 2 | 245 |
Module680 | 6 | 32 | GO:0005746 | cellular_component | mitochondrial respiratory chain | 0.001126273 | 2 | 93 |
Module680 | 6 | 33 | GO:0098803 | cellular_component | respiratory chain complex | 0.001126273 | 2 | 93 |
Module680 | 6 | 34 | GO:0009617 | biological_process | response to bacterium | 0.001450406 | 2 | 299 |
Module680 | 6 | 35 | GO:0070469 | cellular_component | respiratory chain | 0.001571516 | 2 | 110 |
Module680 | 6 | 36 | GO:0098800 | cellular_component | inner mitochondrial membrane protein complex | 0.001805865 | 2 | 118 |
Module680 | 6 | 37 | GO:0005215 | molecular_function | transporter activity | 0.001822044 | 3 | 959 |
Module680 | 6 | 38 | GO:0098805 | cellular_component | whole membrane | 0.001965948 | 3 | 506 |
Module680 | 6 | 39 | GO:0098798 | cellular_component | mitochondrial protein complex | 0.002055965 | 2 | 126 |
Module680 | 6 | 40 | GO:1990204 | cellular_component | oxidoreductase complex | 0.002253816 | 2 | 132 |
Module680 | 6 | 41 | GO:0098542 | biological_process | defense response to other organism | 0.002533809 | 2 | 396 |
Module680 | 6 | 42 | GO:0009901 | biological_process | anther dehiscence | 0.002669236 | 1 | 12 |
Module680 | 6 | 43 | GO:2000377 | biological_process | regulation of reactive oxygen species metabolic process | 0.002669236 | 1 | 12 |
Module680 | 6 | 44 | GO:0044455 | cellular_component | mitochondrial membrane part | 0.002749469 | 2 | 146 |
Module680 | 6 | 45 | GO:0051260 | biological_process | protein homooligomerization | 0.002891457 | 1 | 13 |
Module680 | 6 | 46 | GO:0009900 | biological_process | dehiscence | 0.003113646 | 1 | 14 |
Module680 | 6 | 47 | GO:0098588 | cellular_component | bounding membrane of organelle | 0.003385478 | 3 | 611 |
Module680 | 6 | 48 | GO:0005743 | cellular_component | mitochondrial inner membrane | 0.003414705 | 2 | 163 |
Module680 | 6 | 49 | GO:0006950 | biological_process | response to stress | 0.003593707 | 3 | 2065 |
Module680 | 6 | 50 | GO:0051259 | biological_process | protein oligomerization | 0.004668042 | 1 | 21 |
Module680 | 6 | 51 | GO:0015002 | molecular_function | heme-copper terminal oxidase activity | 0.004867947 | 1 | 16 |
Module680 | 6 | 52 | GO:0004129 | molecular_function | cytochrome-c oxidase activity | 0.004867947 | 1 | 16 |
Module680 | 6 | 53 | GO:0016675 | molecular_function | oxidoreductase activity, acting on a heme group of donors | 0.004867947 | 1 | 16 |
Module680 | 6 | 54 | GO:0016676 | molecular_function | oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor | 0.004867947 | 1 | 16 |
Module680 | 6 | 55 | GO:0006952 | biological_process | defense response | 0.004958253 | 2 | 556 |
Module680 | 6 | 56 | GO:0019866 | cellular_component | organelle inner membrane | 0.005556151 | 2 | 209 |
Module680 | 6 | 57 | GO:0043207 | biological_process | response to external biotic stimulus | 0.005705251 | 2 | 597 |
Module680 | 6 | 58 | GO:0051707 | biological_process | response to other organism | 0.005705251 | 2 | 597 |
Module680 | 6 | 59 | GO:0009607 | biological_process | response to biotic stimulus | 0.006146487 | 2 | 620 |
Module680 | 6 | 60 | GO:0048653 | biological_process | anther development | 0.006220822 | 1 | 28 |
Module680 | 6 | 61 | GO:0006811 | biological_process | ion transport | 0.006323469 | 2 | 629 |
Module680 | 6 | 62 | GO:0005773 | cellular_component | vacuole | 0.008314053 | 3 | 838 |
Module680 | 6 | 63 | GO:0050789 | biological_process | regulation of biological process | 0.008499859 | 3 | 2751 |
Module680 | 6 | 64 | GO:0009055 | molecular_function | electron carrier activity | 0.008688328 | 2 | 499 |
Module680 | 6 | 65 | GO:0055085 | biological_process | transmembrane transport | 0.009315078 | 2 | 766 |
Module680 | 6 | 66 | GO:0045275 | cellular_component | respiratory chain complex III | 0.01019292 | 1 | 18 |
Module680 | 6 | 67 | GO:1902495 | cellular_component | transmembrane transporter complex | 0.01019292 | 1 | 18 |
Module680 | 6 | 68 | GO:0005750 | cellular_component | mitochondrial respiratory chain complex III | 0.01019292 | 1 | 18 |
Module680 | 6 | 69 | GO:1990351 | cellular_component | transporter complex | 0.01019292 | 1 | 18 |
Module680 | 6 | 70 | GO:0065007 | biological_process | biological regulation | 0.010228012 | 3 | 2926 |
Module680 | 6 | 71 | GO:0009605 | biological_process | response to external stimulus | 0.010493925 | 2 | 814 |
Module680 | 6 | 72 | GO:0048466 | biological_process | androecium development | 0.011532376 | 1 | 52 |
Module680 | 6 | 73 | GO:0048443 | biological_process | stamen development | 0.011532376 | 1 | 52 |
Module680 | 6 | 74 | GO:0051704 | biological_process | multi-organism process | 0.012856426 | 2 | 903 |
Module680 | 6 | 75 | GO:0072593 | biological_process | reactive oxygen species metabolic process | 0.0139605 | 1 | 63 |
Module680 | 6 | 76 | GO:0070069 | cellular_component | cytochrome complex | 0.014695234 | 1 | 26 |
Module680 | 6 | 77 | GO:0048609 | biological_process | multicellular organismal reproductive process | 0.014842468 | 1 | 67 |
Module680 | 6 | 78 | GO:0032504 | biological_process | multicellular organism reproduction | 0.015944187 | 1 | 72 |
Module680 | 6 | 79 | GO:0050896 | biological_process | response to stimulus | 0.017932053 | 3 | 3528 |
Module680 | 6 | 80 | GO:0044444 | cellular_component | cytoplasmic part | 0.018167886 | 6 | 5412 |
Module680 | 6 | 81 | GO:0098796 | cellular_component | membrane protein complex | 0.020736612 | 2 | 414 |
Module680 | 6 | 82 | GO:1902494 | cellular_component | catalytic complex | 0.022378773 | 2 | 431 |
Module680 | 6 | 83 | GO:0005730 | cellular_component | nucleolus | 0.023470556 | 2 | 442 |
Module680 | 6 | 84 | GO:0048438 | biological_process | floral whorl development | 0.024947319 | 1 | 113 |
Module680 | 6 | 85 | GO:0048437 | biological_process | floral organ development | 0.028664162 | 1 | 130 |
Module680 | 6 | 86 | GO:0005737 | cellular_component | cytoplasm | 0.030504884 | 6 | 5900 |
Module680 | 6 | 87 | GO:0044765 | biological_process | single-organism transport | 0.031713142 | 2 | 1438 |
Module680 | 6 | 88 | GO:1902578 | biological_process | single-organism localization | 0.032911453 | 2 | 1466 |
Module680 | 6 | 89 | GO:0005747 | cellular_component | mitochondrial respiratory chain complex I | 0.033087314 | 1 | 59 |
Module680 | 6 | 90 | GO:0009941 | cellular_component | chloroplast envelope | 0.034764361 | 2 | 545 |
Module680 | 6 | 91 | GO:0030964 | cellular_component | NADH dehydrogenase complex | 0.036400389 | 1 | 65 |
Module680 | 6 | 92 | GO:0045271 | cellular_component | respiratory chain complex I | 0.036400389 | 1 | 65 |
Module680 | 6 | 93 | GO:0009526 | cellular_component | plastid envelope | 0.037539709 | 2 | 568 |
Module680 | 6 | 94 | GO:0043231 | cellular_component | intracellular membrane-bounded organelle | 0.03971031 | 6 | 6165 |
Module680 | 6 | 95 | GO:0043227 | cellular_component | membrane-bounded organelle | 0.039748989 | 6 | 6166 |
Module680 | 6 | 96 | GO:0031981 | cellular_component | nuclear lumen | 0.041675473 | 2 | 601 |
Module680 | 6 | 97 | GO:0015078 | molecular_function | hydrogen ion transmembrane transporter activity | 0.042544345 | 1 | 142 |
Module680 | 6 | 98 | GO:0005618 | cellular_component | cell wall | 0.04439938 | 2 | 622 |
Module680 | 6 | 99 | GO:0030312 | cellular_component | external encapsulating structure | 0.044530844 | 2 | 623 |
Gene A | Gene B | Partial correlation coefficient |
---|---|---|
GRMZM2G037177 | GRMZM2G067417 | 0.0402 |
GRMZM2G037177 | GRMZM2G158479 | 0.0363 |
GRMZM2G067417 | vdac1a | 0.0359 |
GRMZM2G067417 | GRMZM2G704150 | 0.0351 |
vdac1a | vdac1b | 0.0396 |