Module684
This page contains information for Module684, including a list of the genes within the module, the Gene Ontology enrichement analysis results, and a heatmap showing these genes' tissue specific expression patterns. Also included is a subnetwork for the genes within the module. For this subnetwork, a SIF file (check here for details of SIF file format ) is provided for downloding, which can be opened and viewed within the Cytoscape software . Alternatively, the subnetwork can be also can be opened and visualized by clicking the link provided below.
The list of genes within the module (containing 6 genes) Click to Show / Hide Gene List
Maize Gene Symbol Moule No. Arabidopsis Homologue Arabidopsis Homologue Symbol Arabidopsis Homologue Name Arabidopsis Homologue Description Arabidopsis Homologue TF_Family
GRMZM2G042867 Module684 AT1G56020 AT1G56020
GRMZM2G090528 Module684 AT5G54250 CNGC4 cyclic nucleotide-gated cation channel 4 cyclic nucleotide-gated cation channel 4
GRMZM2G169597 Module684
GRMZM2G390013 Module684 AT1G07020 AT1G07020
GRMZM2G057388 Module684 AT1G70190 AT1G70190 Ribosomal protein L7/L12, oligomerisation;Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like
GRMZM2G083763 Module684 AT5G11010 AT5G11010 Pre-mRNA cleavage complex II protein family
Gene Ontology enrichment analysis Click to Show / Hide Results
Module No. Number of genes within the module GO_Rank GO ID GO catogery GO term pValue Number of genes with the GO within the module Number of genes with the GO within the genome (background set)
Module684 6 1 GO:0009626 biological_process plant-type hypersensitive response 0.003558848 1 24
Module684 6 2 GO:0034050 biological_process host programmed cell death induced by symbiont 0.004003258 1 27
Module684 6 3 GO:0012501 biological_process programmed cell death 0.010657512 1 72
Module684 6 4 GO:0008219 biological_process cell death 0.016553681 1 112
Module684 6 5 GO:0016265 biological_process death 0.016553681 1 112
Module684 6 6 GO:0045087 biological_process innate immune response 0.025657917 1 174
Module684 6 7 GO:0006955 biological_process immune response 0.026536725 1 180
Module684 6 8 GO:0002376 biological_process immune system process 0.029463222 1 200
Module684 6 9 GO:0008324 molecular_function cation transmembrane transporter activity 0.044603543 1 370
A development heatmap for the genes within the module (showing these genes' tissue-specific expression patterns)Click to Download the Heatmap
A subnetwork extracted for the genes witin module
All gene pairs of the subnetwork Click to Show / Hide Gene Pairs
Gene A Gene B Partial correlation coefficient
GRMZM2G042867 GRMZM2G090528 0.0357
GRMZM2G042867 GRMZM2G169597 0.0373
GRMZM2G169597 GRMZM2G390013 0.035
GRMZM2G390013 GRMZM2G057388 0.0351
GRMZM2G390013 GRMZM2G083763 0.0379
A sif file of the subnetwork (This file conains the information of the subnetwork, which be opened using Cytoscape to produce a visualization of the subenetwork.)Click to Download the SIF file
Visualization of the subnetwork Click to Visualize the Subnetwork