This page contains information for Module751, including a list of the genes within the module, the Gene Ontology enrichement analysis results, and a heatmap showing these genes' tissue specific expression patterns. Also included is a subnetwork for the genes within the module. For this subnetwork, a SIF file (check here for details of SIF file format) is provided for downloding, which can be opened and viewed within the Cytoscape software. Alternatively, the subnetwork can be also can be opened and visualized by clicking the link provided below.
Maize Gene | Symbol | Moule No. | Arabidopsis Homologue | Arabidopsis Homologue Symbol | Arabidopsis Homologue Name | Arabidopsis Homologue Description | Arabidopsis Homologue TF_Family |
---|---|---|---|---|---|---|---|
GRMZM2G134234 | Module751 | AT3G25910 | AT3G25910 | Protein of unknown function (DUF1644) | |||
GRMZM2G034573 | Module751 | AT3G25910 | AT3G25910 | Protein of unknown function (DUF1644) | |||
GRMZM2G145721 | Module751 | ||||||
GRMZM2G164358 | Module751 | AT2G40830 | RHC1A | RING-H2 finger C1A | RING-H2 finger C1A | ||
GRMZM2G171311 | Module751 | AT5G65630 | GTE7 | global transcription factor group E7 | global transcription factor group E7 | ||
GRMZM2G301860 | ereb122 | Module751 | AT4G36900 | RAP2.10 | related to AP2 10 | related to AP2 10 | AP2-EREBP |
Module No. | Number of genes within the module | GO_Rank | GO ID | GO catogery | GO term | pValue | Number of genes with the GO within the module | Number of genes with the GO within the genome (background set) |
---|---|---|---|---|---|---|---|---|
Module751 | 6 | 1 | GO:0009414 | biological_process | response to water deprivation | 0.000323841 | 2 | 243 |
Module751 | 6 | 2 | GO:0009415 | biological_process | response to water | 0.000348325 | 2 | 252 |
Module751 | 6 | 3 | GO:0045763 | biological_process | negative regulation of cellular amino acid metabolic process | 0.000445203 | 1 | 3 |
Module751 | 6 | 4 | GO:0033239 | biological_process | negative regulation of cellular amine metabolic process | 0.000445203 | 1 | 3 |
Module751 | 6 | 5 | GO:0006561 | biological_process | proline biosynthetic process | 0.001631926 | 1 | 11 |
Module751 | 6 | 6 | GO:0033238 | biological_process | regulation of cellular amine metabolic process | 0.001928497 | 1 | 13 |
Module751 | 6 | 7 | GO:0006521 | biological_process | regulation of cellular amino acid metabolic process | 0.001928497 | 1 | 13 |
Module751 | 6 | 8 | GO:0006560 | biological_process | proline metabolic process | 0.002225023 | 1 | 15 |
Module751 | 6 | 9 | GO:0001101 | biological_process | response to acid chemical | 0.002740968 | 2 | 706 |
Module751 | 6 | 10 | GO:0010035 | biological_process | response to inorganic substance | 0.003780029 | 2 | 829 |
Module751 | 6 | 11 | GO:0009084 | biological_process | glutamine family amino acid biosynthetic process | 0.004151373 | 1 | 28 |
Module751 | 6 | 12 | GO:1901700 | biological_process | response to oxygen-containing compound | 0.004555284 | 2 | 910 |
Module751 | 6 | 13 | GO:0010565 | biological_process | regulation of cellular ketone metabolic process | 0.00489178 | 1 | 33 |
Module751 | 6 | 14 | GO:0009064 | biological_process | glutamine family amino acid metabolic process | 0.007554969 | 1 | 51 |
Module751 | 6 | 15 | GO:0042180 | biological_process | cellular ketone metabolic process | 0.007850658 | 1 | 53 |
Module751 | 6 | 16 | GO:0051254 | biological_process | positive regulation of RNA metabolic process | 0.008885225 | 1 | 60 |
Module751 | 6 | 17 | GO:0045893 | biological_process | positive regulation of transcription, DNA-templated | 0.008885225 | 1 | 60 |
Module751 | 6 | 18 | GO:1903508 | biological_process | positive regulation of nucleic acid-templated transcription | 0.008885225 | 1 | 60 |
Module751 | 6 | 19 | GO:1902680 | biological_process | positive regulation of RNA biosynthetic process | 0.008885225 | 1 | 60 |
Module751 | 6 | 20 | GO:0045935 | biological_process | positive regulation of nucleobase-containing compound metabolic process | 0.009771567 | 1 | 66 |
Module751 | 6 | 21 | GO:0010628 | biological_process | positive regulation of gene expression | 0.010657512 | 1 | 72 |
Module751 | 6 | 22 | GO:0031326 | biological_process | regulation of cellular biosynthetic process | 0.010894057 | 2 | 1407 |
Module751 | 6 | 23 | GO:0051171 | biological_process | regulation of nitrogen compound metabolic process | 0.010925061 | 2 | 1409 |
Module751 | 6 | 24 | GO:0010557 | biological_process | positive regulation of macromolecule biosynthetic process | 0.010952739 | 1 | 74 |
Module751 | 6 | 25 | GO:0009889 | biological_process | regulation of biosynthetic process | 0.011127661 | 2 | 1422 |
Module751 | 6 | 26 | GO:0009628 | biological_process | response to abiotic stimulus | 0.01120608 | 2 | 1427 |
Module751 | 6 | 27 | GO:0031328 | biological_process | positive regulation of cellular biosynthetic process | 0.011247922 | 1 | 76 |
Module751 | 6 | 28 | GO:0051173 | biological_process | positive regulation of nitrogen compound metabolic process | 0.011543061 | 1 | 78 |
Module751 | 6 | 29 | GO:0009891 | biological_process | positive regulation of biosynthetic process | 0.011543061 | 1 | 78 |
Module751 | 6 | 30 | GO:0080090 | biological_process | regulation of primary metabolic process | 0.012832279 | 2 | 1527 |
Module751 | 6 | 31 | GO:0044106 | biological_process | cellular amine metabolic process | 0.013018094 | 1 | 88 |
Module751 | 6 | 32 | GO:0031323 | biological_process | regulation of cellular metabolic process | 0.013290236 | 2 | 1554 |
Module751 | 6 | 33 | GO:0010604 | biological_process | positive regulation of macromolecule metabolic process | 0.014197328 | 1 | 96 |
Module751 | 6 | 34 | GO:0031325 | biological_process | positive regulation of cellular metabolic process | 0.015523123 | 1 | 105 |
Module751 | 6 | 35 | GO:0042221 | biological_process | response to chemical | 0.015552035 | 2 | 1681 |
Module751 | 6 | 36 | GO:0031327 | biological_process | negative regulation of cellular biosynthetic process | 0.016406491 | 1 | 111 |
Module751 | 6 | 37 | GO:0009890 | biological_process | negative regulation of biosynthetic process | 0.016848027 | 1 | 114 |
Module751 | 6 | 38 | GO:0051172 | biological_process | negative regulation of nitrogen compound metabolic process | 0.016995183 | 1 | 115 |
Module751 | 6 | 39 | GO:0019222 | biological_process | regulation of metabolic process | 0.017067985 | 2 | 1761 |
Module751 | 6 | 40 | GO:0009308 | biological_process | amine metabolic process | 0.017289463 | 1 | 117 |
Module751 | 6 | 41 | GO:0018130 | biological_process | heterocycle biosynthetic process | 0.017911934 | 2 | 1804 |
Module751 | 6 | 42 | GO:1901362 | biological_process | organic cyclic compound biosynthetic process | 0.020374857 | 2 | 1924 |
Module751 | 6 | 43 | GO:0009893 | biological_process | positive regulation of metabolic process | 0.020523633 | 1 | 139 |
Module751 | 6 | 44 | GO:0016567 | biological_process | protein ubiquitination | 0.020670514 | 1 | 140 |
Module751 | 6 | 45 | GO:0032446 | biological_process | protein modification by small protein conjugation | 0.021551569 | 1 | 146 |
Module751 | 6 | 46 | GO:0006950 | biological_process | response to stress | 0.023471453 | 2 | 2065 |
Module751 | 6 | 47 | GO:0070647 | biological_process | protein modification by small protein conjugation or removal | 0.023605822 | 1 | 160 |
Module751 | 6 | 48 | GO:1901607 | biological_process | alpha-amino acid biosynthetic process | 0.023605822 | 1 | 160 |
Module751 | 6 | 49 | GO:0031324 | biological_process | negative regulation of cellular metabolic process | 0.023899111 | 1 | 162 |
Module751 | 6 | 50 | GO:0004842 | molecular_function | ubiquitin-protein transferase activity | 0.025746679 | 1 | 142 |
Module751 | 6 | 51 | GO:0019787 | molecular_function | ubiquitin-like protein transferase activity | 0.026645105 | 1 | 147 |
Module751 | 6 | 52 | GO:0048522 | biological_process | positive regulation of cellular process | 0.0275615 | 1 | 187 |
Module751 | 6 | 53 | GO:0008652 | biological_process | cellular amino acid biosynthetic process | 0.030486455 | 1 | 207 |
Module751 | 6 | 54 | GO:0050794 | biological_process | regulation of cellular process | 0.031206609 | 2 | 2381 |
Module751 | 6 | 55 | GO:0048523 | biological_process | negative regulation of cellular process | 0.036177447 | 1 | 246 |
Module751 | 6 | 56 | GO:1901605 | biological_process | alpha-amino acid metabolic process | 0.039816707 | 1 | 271 |
Module751 | 6 | 57 | GO:0050789 | biological_process | regulation of biological process | 0.041661366 | 2 | 2751 |
Module751 | 6 | 58 | GO:0009892 | biological_process | negative regulation of metabolic process | 0.042577941 | 1 | 290 |
Module751 | 6 | 59 | GO:0009409 | biological_process | response to cold | 0.045045149 | 1 | 307 |
Module751 | 6 | 60 | GO:0046483 | biological_process | heterocycle metabolic process | 0.045217967 | 2 | 2866 |
Module751 | 6 | 61 | GO:0048518 | biological_process | positive regulation of biological process | 0.046060132 | 1 | 314 |
Module751 | 6 | 62 | GO:0065007 | biological_process | biological regulation | 0.047131408 | 2 | 2926 |
Module751 | 6 | 63 | GO:1901360 | biological_process | organic cyclic compound metabolic process | 0.049512895 | 2 | 2999 |
Gene A | Gene B | Partial correlation coefficient |
---|---|---|
GRMZM2G134234 | GRMZM2G034573 | 0.0625 |
GRMZM2G134234 | GRMZM2G164358 | 0.0506 |
GRMZM2G134234 | GRMZM2G171311 | 0.0574 |
GRMZM2G034573 | ereb122 | 0.0402 |
GRMZM2G145721 | ereb122 | 0.0361 |