Module820
This page contains information for Module820, including a list of the genes within the module, the Gene Ontology enrichement analysis results, and a heatmap showing these genes' tissue specific expression patterns. Also included is a subnetwork for the genes within the module. For this subnetwork, a SIF file (check here for details of SIF file format ) is provided for downloding, which can be opened and viewed within the Cytoscape software . Alternatively, the subnetwork can be also can be opened and visualized by clicking the link provided below.
The list of genes within the module (containing 5 genes) Click to Show / Hide Gene List
Maize Gene Symbol Moule No. Arabidopsis Homologue Arabidopsis Homologue Symbol Arabidopsis Homologue Name Arabidopsis Homologue Description Arabidopsis Homologue TF_Family
GRMZM2G034668 Module820 AT4G25570 ACYB-2 Cytochrome b561/ferric reductase transmembrane protein family
GRMZM2G030571 algt1 Module820 AT3G08860 PYD4 PYRIMIDINE 4 PYRIMIDINE 4
GRMZM2G180023 Module820 AT2G33580 LYK5 LysM-containing receptor-like kinase 5 Protein kinase superfamily protein
GRMZM5G813403 Module820 AT1G21090 AT1G21090 Cupredoxin superfamily protein
GRMZM2G134113 Module820 AT2G47485 AT2G47485
Gene Ontology enrichment analysis Click to Show / Hide Results
Module No. Number of genes within the module GO_Rank GO ID GO catogery GO term pValue Number of genes with the GO within the module Number of genes with the GO within the genome (background set)
Module820 5 1 GO:0004713 molecular_function protein tyrosine kinase activity 0.004019484 1 33
Module820 5 2 GO:0016998 biological_process cell wall macromolecule catabolic process 0.005483908 1 37
Module820 5 3 GO:0016769 molecular_function transferase activity, transferring nitrogenous groups 0.005843847 1 48
Module820 5 4 GO:0008483 molecular_function transaminase activity 0.005843847 1 48
Module820 5 5 GO:0044036 biological_process cell wall macromolecule metabolic process 0.013018094 1 88
Module820 5 6 GO:0030170 molecular_function pyridoxal phosphate binding 0.014335426 1 118
Module820 5 7 GO:0043168 molecular_function anion binding 0.033414506 2 2999
Module820 5 8 GO:0071554 biological_process cell wall organization or biogenesis 0.036468841 1 248
Module820 5 9 GO:0016740 molecular_function transferase activity 0.040853099 2 3316
A development heatmap for the genes within the module (showing these genes' tissue-specific expression patterns)Click to Download the Heatmap
A subnetwork extracted for the genes witin module
All gene pairs of the subnetwork Click to Show / Hide Gene Pairs
Gene A Gene B Partial correlation coefficient
GRMZM2G034668 algt1 0.0376
GRMZM2G034668 GRMZM5G813403 0.0385
algt1 GRMZM2G180023 0.0517
GRMZM5G813403 GRMZM2G134113 0.043
A sif file of the subnetwork (This file conains the information of the subnetwork, which be opened using Cytoscape to produce a visualization of the subenetwork.)Click to Download the SIF file
Visualization of the subnetwork Click to Visualize the Subnetwork