This page contains information for Module825, including a list of the genes within the module, the Gene Ontology enrichement analysis results, and a heatmap showing these genes' tissue specific expression patterns. Also included is a subnetwork for the genes within the module. For this subnetwork, a SIF file (check here for details of SIF file format) is provided for downloding, which can be opened and viewed within the Cytoscape software. Alternatively, the subnetwork can be also can be opened and visualized by clicking the link provided below.
Maize Gene | Symbol | Moule No. | Arabidopsis Homologue | Arabidopsis Homologue Symbol | Arabidopsis Homologue Name | Arabidopsis Homologue Description | Arabidopsis Homologue TF_Family |
---|---|---|---|---|---|---|---|
GRMZM2G024484 | Module825 | AT5G08530 | CI51 | 51 kDa subunit of complex I | 51 kDa subunit of complex I | ||
GRMZM2G040209 | Module825 | AT5G08530 | CI51 | 51 kDa subunit of complex I | 51 kDa subunit of complex I | ||
GRMZM2G421857 | vpp3 | Module825 | AT1G78900 | VHA-A | vacuolar ATP synthase subunit A | vacuolar ATP synthase subunit A | |
GRMZM2G128877 | Module825 | AT1G78900 | VHA-A | vacuolar ATP synthase subunit A | vacuolar ATP synthase subunit A | ||
GRMZM2G179737 | Module825 | AT3G13410 | AT3G13410 |
Module No. | Number of genes within the module | GO_Rank | GO ID | GO catogery | GO term | pValue | Number of genes with the GO within the module | Number of genes with the GO within the genome (background set) |
---|---|---|---|---|---|---|---|---|
Module825 | 5 | 1 | GO:0007030 | biological_process | Golgi organization | 2.97E-06 | 2 | 10 |
Module825 | 5 | 2 | GO:0098796 | cellular_component | membrane protein complex | 1.13E-05 | 4 | 414 |
Module825 | 5 | 3 | GO:0033180 | cellular_component | proton-transporting V-type ATPase, V1 domain | 1.18E-05 | 2 | 12 |
Module825 | 5 | 4 | GO:0046961 | molecular_function | proton-transporting ATPase activity, rotational mechanism | 1.68E-05 | 2 | 28 |
Module825 | 5 | 5 | GO:0036442 | molecular_function | hydrogen-exporting ATPase activity | 2.07E-05 | 2 | 31 |
Module825 | 5 | 6 | GO:0010256 | biological_process | endomembrane system organization | 2.14E-05 | 2 | 26 |
Module825 | 5 | 7 | GO:0008137 | molecular_function | NADH dehydrogenase (ubiquinone) activity | 2.50E-05 | 2 | 34 |
Module825 | 5 | 8 | GO:0050136 | molecular_function | NADH dehydrogenase (quinone) activity | 2.65E-05 | 2 | 35 |
Module825 | 5 | 9 | GO:0003954 | molecular_function | NADH dehydrogenase activity | 2.80E-05 | 2 | 36 |
Module825 | 5 | 10 | GO:0044769 | molecular_function | ATPase activity, coupled to transmembrane movement of ions, rotational mechanism | 3.29E-05 | 2 | 39 |
Module825 | 5 | 11 | GO:0010181 | molecular_function | FMN binding | 3.47E-05 | 2 | 40 |
Module825 | 5 | 12 | GO:0051539 | molecular_function | 4 iron, 4 sulfur cluster binding | 4.20E-05 | 2 | 44 |
Module825 | 5 | 13 | GO:0016655 | molecular_function | oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 4.80E-05 | 2 | 47 |
Module825 | 5 | 14 | GO:0090662 | biological_process | ATP hydrolysis coupled transmembrane transport | 7.11E-05 | 2 | 47 |
Module825 | 5 | 15 | GO:0015991 | biological_process | ATP hydrolysis coupled proton transport | 7.11E-05 | 2 | 47 |
Module825 | 5 | 16 | GO:0015988 | biological_process | energy coupled proton transmembrane transport, against electrochemical gradient | 7.11E-05 | 2 | 47 |
Module825 | 5 | 17 | GO:0033176 | cellular_component | proton-transporting V-type ATPase complex | 9.43E-05 | 2 | 33 |
Module825 | 5 | 18 | GO:0033178 | cellular_component | proton-transporting two-sector ATPase complex, catalytic domain | 0.000118825 | 2 | 37 |
Module825 | 5 | 19 | GO:0051287 | molecular_function | NAD binding | 0.000119753 | 2 | 74 |
Module825 | 5 | 20 | GO:1902600 | biological_process | hydrogen ion transmembrane transport | 0.000182059 | 2 | 75 |
Module825 | 5 | 21 | GO:0031967 | cellular_component | organelle envelope | 0.000190285 | 4 | 844 |
Module825 | 5 | 22 | GO:0031975 | cellular_component | envelope | 0.000198403 | 4 | 853 |
Module825 | 5 | 23 | GO:0016651 | molecular_function | oxidoreductase activity, acting on NAD(P)H | 0.000223408 | 2 | 101 |
Module825 | 5 | 24 | GO:0019829 | molecular_function | cation-transporting ATPase activity | 0.000250757 | 2 | 107 |
Module825 | 5 | 25 | GO:0042625 | molecular_function | ATPase coupled ion transmembrane transporter activity | 0.000250757 | 2 | 107 |
Module825 | 5 | 26 | GO:0005747 | cellular_component | mitochondrial respiratory chain complex I | 0.000303998 | 2 | 59 |
Module825 | 5 | 27 | GO:0006818 | biological_process | hydrogen transport | 0.000304799 | 2 | 97 |
Module825 | 5 | 28 | GO:0015992 | biological_process | proton transport | 0.000304799 | 2 | 97 |
Module825 | 5 | 29 | GO:0051540 | molecular_function | metal cluster binding | 0.000342183 | 2 | 125 |
Module825 | 5 | 30 | GO:0051536 | molecular_function | iron-sulfur cluster binding | 0.000342183 | 2 | 125 |
Module825 | 5 | 31 | GO:0030964 | cellular_component | NADH dehydrogenase complex | 0.000369137 | 2 | 65 |
Module825 | 5 | 32 | GO:0045271 | cellular_component | respiratory chain complex I | 0.000369137 | 2 | 65 |
Module825 | 5 | 33 | GO:0015078 | molecular_function | hydrogen ion transmembrane transporter activity | 0.000441398 | 2 | 142 |
Module825 | 5 | 34 | GO:0042626 | molecular_function | ATPase activity, coupled to transmembrane movement of substances | 0.000492399 | 2 | 150 |
Module825 | 5 | 35 | GO:0043492 | molecular_function | ATPase activity, coupled to movement of substances | 0.000498967 | 2 | 151 |
Module825 | 5 | 36 | GO:0016469 | cellular_component | proton-transporting two-sector ATPase complex | 0.000518093 | 2 | 77 |
Module825 | 5 | 37 | GO:0016820 | molecular_function | hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances | 0.000525671 | 2 | 155 |
Module825 | 5 | 38 | GO:0032553 | molecular_function | ribonucleotide binding | 0.000613547 | 4 | 2583 |
Module825 | 5 | 39 | GO:0097367 | molecular_function | carbohydrate derivative binding | 0.000638641 | 4 | 2609 |
Module825 | 5 | 40 | GO:0015399 | molecular_function | primary active transmembrane transporter activity | 0.000731796 | 2 | 183 |
Module825 | 5 | 41 | GO:0015405 | molecular_function | P-P-bond-hydrolysis-driven transmembrane transporter activity | 0.000731796 | 2 | 183 |
Module825 | 5 | 42 | GO:0005746 | cellular_component | mitochondrial respiratory chain | 0.000755183 | 2 | 93 |
Module825 | 5 | 43 | GO:0098803 | cellular_component | respiratory chain complex | 0.000755183 | 2 | 93 |
Module825 | 5 | 44 | GO:0015077 | molecular_function | monovalent inorganic cation transmembrane transporter activity | 0.00088197 | 2 | 201 |
Module825 | 5 | 45 | GO:0000325 | cellular_component | plant-type vacuole | 0.0009435 | 2 | 104 |
Module825 | 5 | 46 | GO:0009555 | biological_process | pollen development | 0.000966629 | 2 | 173 |
Module825 | 5 | 47 | GO:0046034 | biological_process | ATP metabolic process | 0.000966629 | 2 | 173 |
Module825 | 5 | 48 | GO:0043234 | cellular_component | protein complex | 0.000982375 | 4 | 1283 |
Module825 | 5 | 49 | GO:0098662 | biological_process | inorganic cation transmembrane transport | 0.001022967 | 2 | 178 |
Module825 | 5 | 50 | GO:0098655 | biological_process | cation transmembrane transport | 0.001034423 | 2 | 179 |
Module825 | 5 | 51 | GO:0015672 | biological_process | monovalent inorganic cation transport | 0.001045942 | 2 | 180 |
Module825 | 5 | 52 | GO:0070469 | cellular_component | respiratory chain | 0.001054858 | 2 | 110 |
Module825 | 5 | 53 | GO:0009144 | biological_process | purine nucleoside triphosphate metabolic process | 0.001069166 | 2 | 182 |
Module825 | 5 | 54 | GO:0009205 | biological_process | purine ribonucleoside triphosphate metabolic process | 0.001069166 | 2 | 182 |
Module825 | 5 | 55 | GO:0009199 | biological_process | ribonucleoside triphosphate metabolic process | 0.001092641 | 2 | 184 |
Module825 | 5 | 56 | GO:0098660 | biological_process | inorganic ion transmembrane transport | 0.001104472 | 2 | 185 |
Module825 | 5 | 57 | GO:0043168 | molecular_function | anion binding | 0.001115312 | 4 | 2999 |
Module825 | 5 | 58 | GO:0009141 | biological_process | nucleoside triphosphate metabolic process | 0.001128323 | 2 | 187 |
Module825 | 5 | 59 | GO:0009167 | biological_process | purine ribonucleoside monophosphate metabolic process | 0.001201371 | 2 | 193 |
Module825 | 5 | 60 | GO:0009126 | biological_process | purine nucleoside monophosphate metabolic process | 0.001201371 | 2 | 193 |
Module825 | 5 | 61 | GO:0098800 | cellular_component | inner mitochondrial membrane protein complex | 0.001212776 | 2 | 118 |
Module825 | 5 | 62 | GO:0009161 | biological_process | ribonucleoside monophosphate metabolic process | 0.001315152 | 2 | 202 |
Module825 | 5 | 63 | GO:0009123 | biological_process | nucleoside monophosphate metabolic process | 0.001354199 | 2 | 205 |
Module825 | 5 | 64 | GO:0098798 | cellular_component | mitochondrial protein complex | 0.001381437 | 2 | 126 |
Module825 | 5 | 65 | GO:0002020 | molecular_function | protease binding | 0.001462389 | 1 | 6 |
Module825 | 5 | 66 | GO:1990204 | cellular_component | oxidoreductase complex | 0.001514952 | 2 | 132 |
Module825 | 5 | 67 | GO:0009150 | biological_process | purine ribonucleotide metabolic process | 0.001686661 | 2 | 229 |
Module825 | 5 | 68 | GO:0046128 | biological_process | purine ribonucleoside metabolic process | 0.001701286 | 2 | 230 |
Module825 | 5 | 69 | GO:0042278 | biological_process | purine nucleoside metabolic process | 0.001715973 | 2 | 231 |
Module825 | 5 | 70 | GO:0022890 | molecular_function | inorganic cation transmembrane transporter activity | 0.001739175 | 2 | 283 |
Module825 | 5 | 71 | GO:1901265 | molecular_function | nucleoside phosphate binding | 0.001776602 | 4 | 3369 |
Module825 | 5 | 72 | GO:0000166 | molecular_function | nucleotide binding | 0.001776602 | 4 | 3369 |
Module825 | 5 | 73 | GO:0048229 | biological_process | gametophyte development | 0.001805388 | 2 | 237 |
Module825 | 5 | 74 | GO:0006163 | biological_process | purine nucleotide metabolic process | 0.001820506 | 2 | 238 |
Module825 | 5 | 75 | GO:0034220 | biological_process | ion transmembrane transport | 0.001835685 | 2 | 239 |
Module825 | 5 | 76 | GO:0009259 | biological_process | ribonucleotide metabolic process | 0.001835685 | 2 | 239 |
Module825 | 5 | 77 | GO:0044455 | cellular_component | mitochondrial membrane part | 0.001849755 | 2 | 146 |
Module825 | 5 | 78 | GO:0042623 | molecular_function | ATPase activity, coupled | 0.001939208 | 2 | 299 |
Module825 | 5 | 79 | GO:0036094 | molecular_function | small molecule binding | 0.00195607 | 4 | 3451 |
Module825 | 5 | 80 | GO:0009119 | biological_process | ribonucleoside metabolic process | 0.001959332 | 2 | 247 |
Module825 | 5 | 81 | GO:0009116 | biological_process | nucleoside metabolic process | 0.002218389 | 2 | 263 |
Module825 | 5 | 82 | GO:0005743 | cellular_component | mitochondrial inner membrane | 0.00229978 | 2 | 163 |
Module825 | 5 | 83 | GO:0019693 | biological_process | ribose phosphate metabolic process | 0.002319567 | 2 | 269 |
Module825 | 5 | 84 | GO:0072521 | biological_process | purine-containing compound metabolic process | 0.002336643 | 2 | 270 |
Module825 | 5 | 85 | GO:1901657 | biological_process | glycosyl compound metabolic process | 0.002582095 | 2 | 284 |
Module825 | 5 | 86 | GO:0022804 | molecular_function | active transmembrane transporter activity | 0.002692314 | 2 | 353 |
Module825 | 5 | 87 | GO:0050662 | molecular_function | coenzyme binding | 0.00292271 | 2 | 368 |
Module825 | 5 | 88 | GO:0008324 | molecular_function | cation transmembrane transporter activity | 0.002954122 | 2 | 370 |
Module825 | 5 | 89 | GO:0016887 | molecular_function | ATPase activity | 0.003162258 | 2 | 383 |
Module825 | 5 | 90 | GO:0031966 | cellular_component | mitochondrial membrane | 0.003274638 | 2 | 195 |
Module825 | 5 | 91 | GO:0009117 | biological_process | nucleotide metabolic process | 0.003471954 | 2 | 330 |
Module825 | 5 | 92 | GO:0006753 | biological_process | nucleoside phosphate metabolic process | 0.003639669 | 2 | 338 |
Module825 | 5 | 93 | GO:0019866 | cellular_component | organelle inner membrane | 0.003752952 | 2 | 209 |
Module825 | 5 | 94 | GO:0005740 | cellular_component | mitochondrial envelope | 0.003859511 | 2 | 212 |
Module825 | 5 | 95 | GO:0031090 | cellular_component | organelle membrane | 0.004237413 | 3 | 826 |
Module825 | 5 | 96 | GO:0044425 | cellular_component | membrane part | 0.004441694 | 4 | 1895 |
Module825 | 5 | 97 | GO:0055086 | biological_process | nucleobase-containing small molecule metabolic process | 0.004725718 | 2 | 386 |
Module825 | 5 | 98 | GO:0032991 | cellular_component | macromolecular complex | 0.005295472 | 4 | 1984 |
Module825 | 5 | 99 | GO:0015075 | molecular_function | ion transmembrane transporter activity | 0.005424927 | 2 | 504 |
Module825 | 5 | 100 | GO:0044429 | cellular_component | mitochondrial part | 0.005713747 | 2 | 259 |
Module825 | 5 | 101 | GO:0048037 | molecular_function | cofactor binding | 0.005789288 | 2 | 521 |
Module825 | 5 | 102 | GO:0044710 | biological_process | single-organism metabolic process | 0.006328667 | 4 | 3802 |
Module825 | 5 | 103 | GO:0006812 | biological_process | cation transport | 0.006579505 | 2 | 457 |
Module825 | 5 | 104 | GO:0009651 | biological_process | response to salt stress | 0.007066528 | 2 | 474 |
Module825 | 5 | 105 | GO:0022891 | molecular_function | substrate-specific transmembrane transporter activity | 0.008262304 | 2 | 625 |
Module825 | 5 | 106 | GO:0006970 | biological_process | response to osmotic stress | 0.008371797 | 2 | 517 |
Module825 | 5 | 107 | GO:1901135 | biological_process | carbohydrate derivative metabolic process | 0.008498527 | 2 | 521 |
Module825 | 5 | 108 | GO:0019637 | biological_process | organophosphate metabolic process | 0.009112751 | 2 | 540 |
Module825 | 5 | 109 | GO:0022892 | molecular_function | substrate-specific transporter activity | 0.010244385 | 2 | 698 |
Module825 | 5 | 110 | GO:0022857 | molecular_function | transmembrane transporter activity | 0.011869097 | 2 | 753 |
Module825 | 5 | 111 | GO:0006811 | biological_process | ion transport | 0.012256144 | 2 | 629 |
Module825 | 5 | 112 | GO:0017111 | molecular_function | nucleoside-triphosphatase activity | 0.012425015 | 2 | 771 |
Module825 | 5 | 113 | GO:0016462 | molecular_function | pyrophosphatase activity | 0.013866444 | 2 | 816 |
Module825 | 5 | 114 | GO:0016818 | molecular_function | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 0.014665125 | 2 | 840 |
Module825 | 5 | 115 | GO:0016817 | molecular_function | hydrolase activity, acting on acid anhydrides | 0.015312054 | 2 | 859 |
Module825 | 5 | 116 | GO:1902494 | cellular_component | catalytic complex | 0.015330457 | 2 | 431 |
Module825 | 5 | 117 | GO:0043167 | molecular_function | ion binding | 0.015910822 | 4 | 5827 |
Module825 | 5 | 118 | GO:0055085 | biological_process | transmembrane transport | 0.017929334 | 2 | 766 |
Module825 | 5 | 119 | GO:0006996 | biological_process | organelle organization | 0.018155024 | 2 | 771 |
Module825 | 5 | 120 | GO:0005215 | molecular_function | transporter activity | 0.018927344 | 2 | 959 |
Module825 | 5 | 121 | GO:1901363 | molecular_function | heterocyclic compound binding | 0.023977849 | 4 | 6456 |
Module825 | 5 | 122 | GO:0009941 | cellular_component | chloroplast envelope | 0.023988401 | 2 | 545 |
Module825 | 5 | 123 | GO:0097159 | molecular_function | organic cyclic compound binding | 0.024052233 | 4 | 6461 |
Module825 | 5 | 124 | GO:0009526 | cellular_component | plastid envelope | 0.025941405 | 2 | 568 |
Module825 | 5 | 125 | GO:0019899 | molecular_function | enzyme binding | 0.026078466 | 1 | 108 |
Module825 | 5 | 126 | GO:0044446 | cellular_component | intracellular organelle part | 0.026953672 | 4 | 3055 |
Module825 | 5 | 127 | GO:0044422 | cellular_component | organelle part | 0.027117265 | 4 | 3060 |
Module825 | 5 | 128 | GO:0005618 | cellular_component | cell wall | 0.030787338 | 2 | 622 |
Module825 | 5 | 129 | GO:0030312 | cellular_component | external encapsulating structure | 0.030880463 | 2 | 623 |
Module825 | 5 | 130 | GO:0044444 | cellular_component | cytoplasmic part | 0.035441995 | 5 | 5412 |
Module825 | 5 | 131 | GO:0016043 | biological_process | cellular component organization | 0.049099787 | 2 | 1303 |
Module825 | 5 | 132 | GO:0016491 | molecular_function | oxidoreductase activity | 0.049155641 | 2 | 1587 |
Gene A | Gene B | Partial correlation coefficient |
---|---|---|
GRMZM2G024484 | GRMZM2G040209 | 0.0417 |
GRMZM2G024484 | vpp3 | 0.0372 |
vpp3 | GRMZM2G128877 | 0.0391 |
vpp3 | GRMZM2G179737 | 0.043 |