Module849
This page contains information for Module849, including a list of the genes within the module, the Gene Ontology enrichement analysis results, and a heatmap showing these genes' tissue specific expression patterns. Also included is a subnetwork for the genes within the module. For this subnetwork, a SIF file (check here for details of SIF file format ) is provided for downloding, which can be opened and viewed within the Cytoscape software . Alternatively, the subnetwork can be also can be opened and visualized by clicking the link provided below.
The list of genes within the module (containing 5 genes) Click to Show / Hide Gene List
Maize Gene Symbol Moule No. Arabidopsis Homologue Arabidopsis Homologue Symbol Arabidopsis Homologue Name Arabidopsis Homologue Description Arabidopsis Homologue TF_Family
GRMZM2G056772 Module849 AT5G01740 AT5G01740 Nuclear transport factor 2 (NTF2) family protein
GRMZM2G045664 Module849 AT2G46140 AT2G46140 Late embryogenesis abundant protein
GRMZM2G071154 Module849 AT5G42050 AT5G42050 DCD (Development and Cell Death) domain protein
GRMZM2G169372 dhn13 Module849
GRMZM2G170120 Module849 AT3G17510 CIPK1 CBL-interacting protein kinase 1 CBL-interacting protein kinase 1
Gene Ontology enrichment analysis Click to Show / Hide Results
Module No. Number of genes within the module GO_Rank GO ID GO catogery GO term pValue Number of genes with the GO within the module Number of genes with the GO within the genome (background set)
Module849 5 1 GO:0009620 biological_process response to fungus 0.000612696 2 194
Module849 5 2 GO:0043207 biological_process response to external biotic stimulus 0.005705251 2 597
Module849 5 3 GO:0051707 biological_process response to other organism 0.005705251 2 597
Module849 5 4 GO:0009269 biological_process response to desiccation 0.005777336 1 26
Module849 5 5 GO:0009607 biological_process response to biotic stimulus 0.006146487 2 620
Module849 5 6 GO:0009605 biological_process response to external stimulus 0.010493925 2 814
Module849 5 7 GO:0051704 biological_process multi-organism process 0.012856426 2 903
Module849 5 8 GO:0007568 biological_process aging 0.013298679 1 60
Module849 5 9 GO:0009644 biological_process response to high light intensity 0.014181041 1 64
Module849 5 10 GO:0050896 biological_process response to stimulus 0.017932053 3 3528
Module849 5 11 GO:0009642 biological_process response to light intensity 0.021659889 1 98
Module849 5 12 GO:0050832 biological_process defense response to fungus 0.03128212 1 142
Module849 5 13 GO:0009611 biological_process response to wounding 0.034330455 1 156
A development heatmap for the genes within the module (showing these genes' tissue-specific expression patterns)Click to Download the Heatmap
A subnetwork extracted for the genes witin module
All gene pairs of the subnetwork Click to Show / Hide Gene Pairs
Gene A Gene B Partial correlation coefficient
GRMZM2G056772 GRMZM2G045664 0.0533
GRMZM2G056772 GRMZM2G170120 0.0401
GRMZM2G045664 GRMZM2G071154 0.037
GRMZM2G045664 dhn13 0.0374
A sif file of the subnetwork (This file conains the information of the subnetwork, which be opened using Cytoscape to produce a visualization of the subenetwork.)Click to Download the SIF file
Visualization of the subnetwork Click to Visualize the Subnetwork